These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9254#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1089 fasta sequence [TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGAGTTGGAAAATCTAGTCTTATCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGTACTACCGGGAACGCGCCAGGGGGCCCATCCTCGTGTACGACGTTACCAAGCCGGGAAGACGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCGCACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCGAACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTTCCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGAAAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGGTGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGGTGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGGNATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCCGGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGNATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCACANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCTTTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAGAGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGTAGGCATCCCATTGGTANATAATAACGGGATAACAACNAA] [+] EMBL AL696504 [TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGAGTTGGAAAATCTAGTCTTATCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGTACTACCGGGAACGCGCCAGGGGGCCCATCCTCGTGTACGACGTTACCAAGCCGGGAAGACGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCGCACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCGAACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTTCCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGAAAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGGTGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGGTGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGGNATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCCGGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGNATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCACANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCTTTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAGAGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGTAGGCATCCCATTGGTANATAATAACGGGATAACAACNAA] consensusID : consensus_9254#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 915 fasta sequence [ATACGTTCGACAAAAGG-G-AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA-GATATTAATAATCGGCGAAAGCGGAGTT-GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCGCTATCGCTGCCATGCTTTCGTG-AAACCCCCTCCCCCCCATTTTCCTATGCTCG] [+] EMBL CNS09MXE [ATACGTTCTACAAAAGG G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAAATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCGCTATCGCTGCCATGCTTTCGTG AAACCCCCTCCCC ] [+] EMBL AL929772 [ agaTCGCCAGCAGGTGAAAGGC AGCACGCAGAAAAACACGGAACTACACGGTCTAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAG CCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAATGATATTAATAATCGGCGAAAGCGGAGTTNGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCAT ] [+] EMBL BM593064 [ cCGACAAAAGG G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGT ] [+] EMBL CNS093E6 [ G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGT ] [+] EMBL BM600250 [ cc G AAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGAACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATC ] [+] EMBL BX603882 [ AGCACGCAGAAAAACACGGAACTACACGGTCGAAAAACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAAC ] [+] EMBL BX628648 [ GACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTTATTTCCCCAACCCAGTTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCTATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGANGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGGAACGACTACNGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCG ] [+] EMBL BX623689 [ TACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTCCCGTGAAGAAAAACGCACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATCATCATGGATCCGGATCGCATTCTGGCAACGTTCAA GATATTAATAATCGGCGAAAGCGGAGTT GGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTCACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCGACCACCCGAACCGGGCGATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCGAGGAGGTGGTGCGCAAGATTATGGAAACAGACGGACTGTGGGAACGGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCGGGAGCGGCCGGTTCGTGTTCTTGNTAGCTTCCCGCTATTGCTGNC TGCTTTCGTGCAAACCCCCCCCCCCCCATTTTCCTATGCTCG] consensusID : consensus_9254#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 878 fasta sequence [CAGAATCGCGCNGAGGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAAACAACATGGCCAAGATGGTGGTGGGCAACAAAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATT-CGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACG-GAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTT-CCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCC-CACAGCGCGAGTGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAAAAGAAAAAAAACCGTTAAGATCACCTAA] [+] EMBL AL697158 [CAGAATCGCGCNGAGGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCGCACCCTGACGCCCAGCTACTACCGGGACGCGCAGGGGGCCATCCTCGTGTACGACGTTACCAAGCCGGACACGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGCACGCGCAAACAACATGGCCAAGATGGTGGTGGGCAACAAAGA ] [+] EMBL BX618569 [ GCTGAACGAGCTGGAAATTTACGGCACGCGC AACAACATGGCCAAGATGGTGGTGGGCAAC AAGATCGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATT CGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACG GAACGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTT CCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTC ] [-] EMBL CNS09MXF [ ACGTCCGCGAAGACGAGCGAGGGCGTGAAGGACGCATTCCGAGGAGGTGGTGCGCAAGATTATGGAAACGGACGGACTGTGGGAACGCGAACGACTACGGCGATGGTGGGGTCGATCTGCACGGAAATCGGGCGGCTGGAGCGGCCGGTTCGTGTTCTTGTTAGCTTCCCCGCTATCGCTGCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCC CACAGCGCGAGTGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAAAAGAAAAAAAACCGTTAAGATCACCTAA] [+] EMBL BX614723 [ CGACTACGGCGATGGTGGGGTCGATCTGCACGGCAATCGGGCGGCTGGAGCGGCCGGTTCGGGTTCTTGTTAGCTT CCCGCTATCGCTGCCATGCTTTCGGGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAAGGCAACATTAACTGGTACCATTTAAACAGTTAATAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTT ] [-] EMBL CNS093E7 [ GCCATGCTTTCGTGCAAACCCCCTCCCCCCCCATTTTCCTATGTTCGTCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAGTTAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTATAGGTAAAATATTTTTAGCACATATTTAATCACCCAGCCTCCCCTCTCCGCACAGCGCG ] consensusID : consensus_9254#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 720 fasta sequence [ATTGCCCTGAGGTTTGAGTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTACTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACACTGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGACTGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCTGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCTGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGANAGGACGCATTCGAGGAGGTGGTGCGCAAGATTTATGGAAACGGACGGACTGTGGGAACGGAACGATACGGCCGATTGGGTGGGGTCGATCTGCACGGCATCGGGCGGCTGGAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCGCGTGNCATGCTTTACGTGCAAAACCCACCTCCNCCCCCCCATATATCCTAATGTTACCGTCAACCGGCACTTCAATGACTNATTCNAATGCAACATCATTAACTGGTTACCAATT] [+] EMBL AL932023 [ATTGCCCTGAGGTTTGAGTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCGCTCACGATCGGGGTCGACTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGAAGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTACTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACACTGTTCCAGAAGCTCGAGTCGTGGCTGAACGAGCTGGAAATTTACGGACTGCGCAACAACATGGCCAAGATGGTGGTGGGCAACAAGATCTGACCACCCGAACCGGGCCATCGGGCGGGAGGAGGGCTTCCTGGTTCGCGAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTGANAGGACGCATTCGAGGAGGTGGTGCGCAAGATTTATGGAAACGGACGGACTGTGGGAACGGAACGATACGGCCGATTGGGTGGGGTCGATCTGCACGGCATCGGGCGGCTGGAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCGCGTGNCATGCTTTACGTGCAAAACCCACCTCCNCCCCCCCATATATCCTAATGTTACCGTCAACCGGCACTTCAATGACTNATTCNAATGCAACATCATTAACTGGTTACCAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9254#2 ------------------------------------------------------------ consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ATACGTTCGACAAAAGGGAAGGCAAGCACGCAGAAAAACACGGAACTACACGGTCGAAAA 60 consensus_9254#0 ------------------------------------------------------------ consensus_9254#2 ------------------------------------------------------------ consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ACGACCTTCTTTCTCCGTTTGTTGTAGATTTCTTTATTGTTTTTTGTGCGTGTGCATTTT 120 consensus_9254#0 ------------------------------------------------------------ consensus_9254#2 ------------------------------------------------------------ consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ATTTCCCCAACCCAATTGTACAAGCTGTGATTAGCGGTGCAGGTTCGCCGCCGCACCCTC 180 consensus_9254#0 ------------------------------------------------------------ consensus_9254#2 ------------------------------------------------------------ consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 CCGTGAAGAAAAACGTACCAAAGCTCGCACAAACAGCAACAACAACGACAACAGCCCATC 240 consensus_9254#0 ------------------------------------------------------------ consensus_9254#2 --------------------------------------------------------CAGA 4 consensus_9254#3 -------------------------------------------ATTGCCCTGAGGTTTGA 17 consensus_9254#1 ATCATGGATCCGGATCGCATTCTGGCAACGTTCAAGATATTAATAATCGGCGAAAGCGGA 300 consensus_9254#0 ----------------------TCTTAGCAGATTCCCCGCGGTATATCGGCGAAAGCGGA 38 ** consensus_9254#2 ATCGCGCNGA--GGTTANATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 62 consensus_9254#3 GTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 77 consensus_9254#1 GTTGGAAAATCTAGTCTTATGCTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 360 consensus_9254#0 GTTGGAAAATCTAGTCTTAT-CTACGCTTCACAGAGAACGACTTCGACAGCGATCAGGCG 97 * * ** ** *************************************** consensus_9254#2 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 120 consensus_9254#3 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAGTGTGA 136 consensus_9254#1 CTCACGATCGGGGTCGAC-TTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 418 consensus_9254#0 CTCACGATCGGGGTCGACGTTCAAGACGAAGATGCTCGACCTGGACGGGGTGAAG-GTGA 156 ****************** ************************************ **** consensus_9254#2 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAGCTA 178 consensus_9254#3 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTCTGCACCCTGACTGCCCAGCTA 196 consensus_9254#1 AGCTGGCGATCTGGGACACGGCCGGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAGCTA 476 consensus_9254#0 AGCTGGCGATCTGGGACACGGC-GGCCAGGAGCGGTTTC-GCACCCTGAC-GCCCAG-TA 212 ********************** **************** ********** ****** ** consensus_9254#2 CTACCGGGAC----GCGCAGGGGGCCATCCTCGTGTACGAC-GTTACCAAGCC-GGACAC 232 consensus_9254#3 CTACCGGGACTGCTGCAGGGTGTGCCATCCTCGTGTACGACTGTTACCAAGCCTGGACAC 256 consensus_9254#1 CTACCGGGAC----GCGCAGGGGGCCATCCTCGTGTACGAC-GTTACCAAGCC-GGACAC 530 consensus_9254#0 CTACCGGGAACGC-GCCAGGGGGCCCATCCTCGTGTACGAC-GTTACCAAGCCGGGAAGA 270 ********* ** * * ***************** *********** *** consensus_9254#2 -GTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---CACGCG 283 consensus_9254#3 TGTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---ACTGCG 308 consensus_9254#1 -GTTCCAGAAGCTCGAGTCGTGGC--TGA-ACGAGCTGG--AAATTTACGG---CACGCG 581 consensus_9254#0 CGTTCCATAAGCTCGAGTCGTAGGCATGACACGAGCTGGGCAAATTTACGGGCGACTGCG 330 ****** ************* * *** ********* ********** *** consensus_9254#2 CAAACAAC---ATGGCCAAGAT------GGTGGTGGGCAACAAAGATC---GACCACCCG 331 consensus_9254#3 CAA-CAAC---ATGGCCAAGAT------GGTGGTGGGCAACAAGATCT---GACCACCCG 355 consensus_9254#1 CAA-CAAC---ATGGCCAAGAT------GGTGGTGGGCAACAA-GATC---GACCACCCG 627 consensus_9254#0 CACACAACCATGGGGCCAAAGNTTGGTTGGTTGGGGCAAACAAAGATTCGGAACAACCCG 390 ** **** ****** *** * ** ***** ** ***** consensus_9254#2 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---C-GGTTCG 368 consensus_9254#3 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---CTGGTTCG 393 consensus_9254#1 AAC-CGGG-----CCATCGGGCGGG-------------AGGAGGGCTTC---C-GGTTCG 664 consensus_9254#0 AACACAGGGGGCCCCATCCGGTGGAGANGGGGCAGGACAGGGGGGTTTCACCCGGGTTTT 450 *** * ** ***** ** ** *** *** *** * **** consensus_9254#2 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 424 consensus_9254#3 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 449 consensus_9254#1 C----GAAGAAGCACCGCATGATGTTCATCGAAACGTCCGCGAAGACGAGCGAGGGCGTG 720 consensus_9254#0 CCGGGAAAGAAAAGGCACCGGCGATTGATTGTTTCAGTCGGAAAAACGGTTCCAGATGGA 510 * ***** * * * ** ** * * ** ** *** * * consensus_9254#2 AA-GGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATT----ATGGAAACGGA 468 consensus_9254#3 ANAGGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATTT---ATGGAAACGGA 495 consensus_9254#1 AA-GGACGCA---TTCGAGGAGGTGGTGCGCAAG--------ATT----ATGGAAACGGA 764 consensus_9254#0 AAGAAACCNGAAGCNGNAGGGNGCCGTGCACAGGGCACGGCNATTTACGAAGGGGAAGGG 570 * ** *** * **** ** * *** * ** * ** consensus_9254#2 CGGACTGTGGGA----ACGGAAC---GACTACGGCGAT--GGTGGGGTCGATCTGCACGG 519 consensus_9254#3 CGGACTGTGGGA----ACGGAAC---GATACGGCCGATTGGGTGGGGTCGATCTGCACGG 548 consensus_9254#1 CGGACTGTGGGA----ACGGAAC---GACTACGGCGAT--GGTGGGGTCGATCTGCACGG 815 consensus_9254#0 TGGGTNGCCGGCCACCACGAACTTTANATTGGGACAGACCGGAGGAACGGGANACCATGG 630 ** * ** *** * * * * ** ** * ** ** consensus_9254#2 CAAT-CGGGCGGCTG-GAGCGGCCGG-TTCGTGTTCTTG-TTAGCTTCCCGC---TATCG 572 consensus_9254#3 CA-T-CGGGCGGCTG-GAGCGGCCGGGTTCGTGTTCNTNGTTAGCTTTCCCCGCGTATCG 605 consensus_9254#1 CAAT-CGGGCGGCTG-GAGCGGCCGG-TTCGTGTTCTTG-TTAGCTTCCCGC---TATCG 868 consensus_9254#0 TGGTGTGAAAAACCGTGAAAAACAGAACATAACNCTGTGACAAGCACTACGATTGAGCGG 690 * * * * ** * * * *** * * consensus_9254#2 C-TGCC---ATGCTTT---------CGTGCAAACCCCCTCCCCCCCCAT-----TTTCCT 614 consensus_9254#3 CGTGNC---ATGCTTTA--------CGTGCAAAACCCACCTCCNCCC-------CCCCAT 647 consensus_9254#1 C-TGCC---ATGCTTT-----------CGTGAAACCCCCTCCCCCCCAT-----TTTCCT 908 consensus_9254#0 NATACAGAAATTCTTTGCAGCCAGGTGGGCAAAATTCAGNGTNCAGTGTCATTGTNATCC 750 * ** **** * ** * consensus_9254#2 ATGTTCG---TCACCGCATCATGATATTCAATGCAACATTAACTGGTACCATTTAAACAG 671 consensus_9254#3 ATATCC----TAATGTTACCGT--CAACCGGCACTTCAATGACTNATTCNAATGCAACAT 701 consensus_9254#1 ATGCTCG----------------------------------------------------- 915 consensus_9254#0 GGGCCCGAGCTAACCGCGTCAGGNTACACTATCATGGNTAANAAGGCAATNCCCCCNGGN 810 * consensus_9254#2 T-TAAGAGGGTCATCGTTTGAGTTTAAGTTGAACGTGTTTTTAATTTTGTTCCTTGTTTA 730 consensus_9254#3 CATTAACTGGTTACCAATT----------------------------------------- 720 consensus_9254#1 ------------------------------------------------------------ consensus_9254#0 ATTAATCGGGCATTGGCCATTGCANNTATACCCGATNGCAAAAAGCGCCACAATTANCCA 870 consensus_9254#2 TAGGTAAAATATTTTTAGCACATATTTAATCGCCCAGCCTCCCCTCTCCCACAGCGCGAG 790 consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ------------------------------------------------------------ consensus_9254#0 CANGCCCACAAATATTATCCATAATGATATCCGTACAACCCGGCAATCNNATGACTTNCT 930 consensus_9254#2 TGTGTGTGTTTTTGGAGAGGGGGTAGCGGATAAGGATGTAAAACACTAGGTGGAAATAAA 850 consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ------------------------------------------------------------ consensus_9254#0 TTCCAACTGCACAGCAATTTACAAGTTGGGTACCCAATTATAAAACAGGATANAAAGAAG 990 consensus_9254#2 AAGAAAAAAAACCGTTAAGATCACCTAA-------------------------------- 878 consensus_9254#3 ------------------------------------------------------------ consensus_9254#1 ------------------------------------------------------------ consensus_9254#0 AGGTATACATCAGTTAGAGGTTAAAAAGATTNGAAACCGTTGTATCATATAAAACNACGT 1050 consensus_9254#2 --------------------------------------- consensus_9254#3 --------------------------------------- consensus_9254#1 --------------------------------------- consensus_9254#0 AGGCATCCCATTGGTANATAATAACGGGATAACAACNAA 1089 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||