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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9260#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1232 fasta sequence
[TCGGTTTACGTGCTTGCTGGTGGACACATTTCGTGAGGGATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGCCAGTGCAAGAAGGAGCTGAACGGCATCAAGCCCTCCCGGCCGTGCGAGCGCCCGCGTATGAGCCGCCGCCTGAAGACCGTCACCCGTACGTTCGGTGGTGTCCTGTGCCACCACTGTCT-GCGTGAGCGCATCATCCGTGCATTCCTGATCGACGGGCAGAAGGTCGTGAAGGTGCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCGCGCACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGTGTGTACCACAAGACTATGCTGTCTGCAGAGAGGGGAAAGGACGGGAATGCAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTCTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTTCGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTGAGAGTGTGTGTGTGCGCACGTGCGCCCGCGTGATATATGCTGACAAGTATTTTACTTTAATGTTGAATGTTAGTTTATTTTGCGCTTCTCGGGTCTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGAACACGCGAAAACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGCTCTTTAAAACTCCAATGAACAACATCTAGATTGGAGCGAA]
[+] EMBL CNS08GLX [TCGGTTTACGTGCTTGCTGGTGGACACATTTCGTGAGGGATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGCCAGTGCAAGAAGGAGCTGAACGGCATCAAGCCCTCCCGGCCGTGCGAGCGCCCGCGTATGAGCCGCCGCCTGAAGACCGTCACCCGTACGTTCGGTGGTGTCCTGTGCCACCACTGTCT GCGTGAGCGCATCATCCGTGCATTCCTGATCGACGGGCAGAAGGTCGTGAAGGTGCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCGCGCACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGTGTGTACCACAAGACTATGCTGTCTGCAGAGAGGGGAAAGGACGGGAATGCAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTCTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTTCGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTGAGAGTGTGTGTGTGCGCACGTGCGCCCGCGTGATATATGCTGACAAGTA ]
[+] EMBL CNS08ENJ [ ACGTGCTTGCTGGTGGACACATTTCGTGAGGAATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGCCAGTGCAAGAAGGAGCTGAACGGCATCAAGCCCTCCCGGCCGTGCGAGCGCCCGCGTATGAGCCGCCGCCTGAAGACCGTCACCCGTACGTTCGGTGGTGTCCTGTGCCACCACTGTCTGGCGTGA CGCATCATCCGTGCAAACCTGATCGACGAGCAGAAGGTCGTGAAGGTGCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCGCGCACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGTGTGTACCACAAGACTATGCTGTCTGCAGAGAGGGGAAAGGACGGGAATGCAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTCTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTTCGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTTAG ]
[+] EMBL CNS08GPW [ ACGTGCTTGCTGGTGGACACATTTCGTGAGGTATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGCCAGTGCAAGAAGGAGCTGAACGGCATCAAGCCCTCCCGGCCGTGCGAGCGCCCGCGTATGAGCCGCCGCCTGAAGACCGTCACCCGTACGTTCGGTGGTGTCCTGTGCCACCACTGTCT GCGTGA CGCATCATCCGTGCATTCCTGATCGACGGGCAGAAGGTCGTGAAGGTGCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCGCGCACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGTGTGTACCACAAGACTATGCTGTCTGCAGAGAGGGGAAAGGACGGGAATGCAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTCTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTTTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTGGATTAGTGGCCATTTATCATTG ]
[-] EMBL CNS08GLY [ ttTCT GCGTGAGCGCTTCATCCGTGCATTCCTGATCAACGGGCAGAAGGTCGTGAAGGGTCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCG GAACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGT TTTACCACAAGACTATGCTTTCTGCAGAGAGGGGAAAGGACGGGAATGAAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTTTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTTCGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTGAGAGTGTGTGTGTGCGCACGTGCGCCCGCGTGATATATGCTGACAAGTATTTTACTTTAATGTTGAATGTTAGTTTATTTTGCGCTTCTCGGGTCTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGAACACGCGAAAACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGCTCTTTAAAACTCCAATGAACAACATCTAGATTGGAGCGAA]
[-] EMBL CNS08GPX [ GGTCAAGGCCCCGAAGACCACCAAGACCACCAAGGCCGGTCCCAGCAAATCGAAGTAAGCTCGAGATTGATGGTGATGGTGGTGGTGGTGGTGTCCTCAGGGTCTCTGAGAATGCCCGCGCACACGCGGAGAATGTAGAGGAGGAGGGTGTGTGT TGTACCACAAGACTATGCTTTCTGCAGAGAGGGGAAAGGACGGGAATGAAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCATCTTCCCTTTCTGGCTCAGCTAGCGGCGCTACCCCCTTGGACAAACACATCATCTTGCCCCCACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACCCAAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTTCTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTTCGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTGAGAGTGTGTGTGTGCGCACGTGCGCCCGCGTGATATATGCTGACAAGTATTTTACTTTAATGTTGAATGTTAGTTTTTTTTGCGCTTCTCGGGTCTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACACGATTGGACACGCGAAAACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTAAGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAGAAAGCTCTTTAAAACTCCAATGAACA ]
consensusID : consensus_9260#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 831 fasta sequence
[CCGCCCACGCGTCCGATCCTCCTCAATCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTACATCGAAAAATGTTTAAAAACGAACAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAGCAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGGAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACAAGAAGATAAAAACAAAACCACACGAGCAATGAATGCAACGAATGCGGTTGGGAAGTGAAGAGCTAAGGAAAACGGTGCGGAGAAATGGACATGAAGATGTCCTTTTCCCGGTACCGTTTTCACTTCCGATTCATTCACCCCAACTCGTTCAGCGCTCCTTACTGCGAGTCAATTATTGTTTCAGATTGTGTTCGATTGGTTGATATAAGCTTGTTC-TGCAAAAATGGGGGTTTTTCTTATCTAAGGAAA-CATGCTATATTATTACCTGCAAATGCAATAGGAACAGAGCAGAAAGGAAACTTTATAATCAATAAAATTAAACCAAATTAATTGGAAAAGAGAAAAAAAACCCACAACTTCAAACCAAAAAAAAAAAAAAAAAAAGGCCACATGGGCCCC]
[+] EMBL BM575485 [CCGCCCACGCGTCCGATCCTCCTCAATCGAAGAACACGCACATGAGTAACGTGCAGCAATTAATCGATCAATCGAAGAGCAACTTACATCGAAAAATGTTTAAAAACGAACAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACAGCAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAGCAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGGAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACAAGAAGATAAAAACAAAACCACACGAGCAATGAATGCAACGAATGCGGTTGGGAAGTGAAGAGCTAAGGAAAACGGTGCGGAGAAATGGACATGAAGATGTCCTTTTCCCGGTACCGTTTTCACTTCCGATTCATTCACCCCAACTCGTTCAGCGCTCCTTACTGCGAGTCAATTATTGTTTCAGATTGTGTTCGATTGGTTGATATAAGCTTGTTC TGCAAAAATGGGGGTTTTTCTTATCTAAGGAAA CATG ]
[+] EMBL CNS09HIO [ AGCAACTTACATCGAAAAATGTTTAAAAACGAACAAAAAAAAATATCATAACCATACACAAGAACCAAGCCCAAAAACCCAAGCAAACACCAGAAGTGAACGAAATCGACGATAATCTAGTGCAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGTTTGGCTATGGTGAAAACCGGCCACATCCGAACCGCTGGCGACA CAGCCTTAGAGTGTAAGACGTTTTATGTTTCTGTTTTGTTTTTCGTGGTGAGACAGCAATTGGAGCAGGCAATTTAAGGGAAACGAGCAAACGATTTAGGCAAATGGAAGCTAGAAGCAACAAAGACGCGCGCAGAGGAAGAAAAAAACAGACAAGAAGATAAAAACAAAACCACACGAGCAATGAATGCAACGAATGCGGTTGGGAAGTGAAGAGCTAAGGAAAACGGTGCGGAGAAATGGACATGAAGATGTCCTTTTCCCGGTACCGTTTTCACTTCCGATTCATTCACCCCAACTCGTTCAGCGCTCCTTACTGCGAGTCAATTATTGTTTCAGATTGTGTTCGATTGGTTGATATAAGCTTGTTCATGC AAAATGGGGGTTTTTCTTATCTAAGGAAACCATGCTATATTATTACCTGCAAATGCAATAGGAACAGAGCAGAAAGGAAACTTTATAATCAATAAAATTAAACCAAATTAATTGGAAAAGAGAAAAAAAACCCACAACTTCAAACCAAAAAAAAAAAAAAAAAAAGGCCACATGGGCCCC]
consensusID : consensus_9260#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 811 fasta sequence
[CCGCCCACGCGTCCGCCTTCCATCTATCCGGTCGCATTCGCCTTTCGCACGAACCCGCTAATCAACAATGGCATCGAGACTTCGAAAGTTCGGCGTGACAGCAGCCGGTATCGCGATCGGTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCACGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTCGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTGGTGTGCGATATCTGCAGAAAGCCATTCTCGGTTTGGACATTGAACAGTACCGGATGGTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCACATCTGACCAGACCACTGCCGATCATGCTTCCCGTTTACACCTGGTGGCAAATTCCGTACTTCTGGGTCGGTATTAAGGCGTACGATTTCGTCGCTGGCGATCGTAACGTGAAAAGCTCGTACTATCTGTCACGCGCCGATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTGC-GGAGCTATCGTGTACTACGACGGACAGCAGGATGACGCACGTATGAATCTGGGCATCGCACTGACCGCGGCACGCCATGGCGCTGCCATCACGAATCACGTCGAGGTGTTGGAGCTG]
[+] EMBL BM637748 [CCGCCCACGCGTCCGCCTTCCATCTATCTAGTCGCATTCGCCTTTCGCACGAACCCGCTAATCAACAATGGCATCGAGACTTCGAAAGTTCGGCGTGACAGCAGCCGGTATCGCGATCGGTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCACGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTTGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTG ]
[+] EMBL BM656090 [ CCGGTCGCATTCGCCTTTCGCACGAACCCGCTAATCAACAATGGCATCGAGACTTCGAAAGTTCGGCGTGACAGCAGCCGGTATCGCGATCGGTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCACGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTCGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTGGTGTGCGATATCTGCAGAAAGCCATTCTCGGTTTGGACATTGAACAGTACCGGATGGTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCACATCTGACCAGACCACTGCCGATCATGCTTCCCGTTTACACCTGGTGGCAAATTCCGTACTTCTGGGTCGGTATTAAGGCGTACGATTTCGTCGCTGGCGATCGTAACGTGAAAAGCTCGTACTATCTGTCACGCGCCGATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTGCGGGAGCTATCGTGTACTACGAC ]
[+] EMBL BM648816 [ CCGGTCGCATTCGCCTTTCGCACGAACCTGCTAATCAACAATGGCATCGAGACTTCGAAAGTTCGGCGTGACAGCAGCCGGTATCGCGATCGGTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCCCGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTCGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTGGTGTGCGATATCTGCAGAAAGCCATTCTCGGTTTGGACATTGAACAGTACCGGATGGTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCACATCTGACCAGACCACTGCCGATCATGCTTCCCGTTTACACCTGGTGGCAAATTCCGTACTTCTGGGTCGGTATTAAGGCGTACGATTTCGTCGCTGGCGATCGTAACGTGAAAAGCTCGTACTATCTGTCACGCGCCGATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTGC GGAGCTATCGTGTACTACG ]
[+] EMBL BM601235 [ ccgATCGCGATCGGTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCACGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTTGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTGGTGTGCGATATCTGCAGAAAGCCATTCTCGGTTTGGACATTGAACAGTACCGGATGGTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCACATCTGACCAGACCACTGCCGATCATGCTTCCCGTTTACACCTGGTGGCAAATTCCGTACTTCTGGGTCGGCATTAAGGCGTACGATTTCGTCGCTGGCGATCGTAACGTGAAAAGCTCGTACTATCTGTCACGCGCCGATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTGC GGAGCTATCGTGTACTACGACGGACAGCAGGATGACGCACGTATGAATCTGGGCATCGCACTGACCGCGGCACGCCATGGCGCTGCCATCACGAATCACGTCGAGGTG ]
[+] EMBL BM642651 [ ccgAAGATACGCCCCAGTATCAGGTTCAAATGGAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCCCGATCGGAACAGATCAAGGCGCTGCAGAGCGACGAAGAGTACGATGTGCTGATCATCGGTGGTGGAGCCACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGAAGCGGACGACTTCGCCAGCGGTACCTCGTCACGATCAACCAAGCTGATCCATGGTGGTGTGCGATATCTGCAGAAAGCCATTCTCGGTTTGGACATTGAACAGTACCGGATGGTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCACATCTGACCAGACCACTGCCGATCATGCTTCCCGTTTACACCTGGTGGCAAATTCCGTACTTCTGGGTCGGTATTAAGGCGTACGATTTCGTCGCTGGCGATCGTAACGTGAAAAGCTCGTACTATCTGTCACGCGCCGATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTGC GGAGCTATCGTGTACTACGACGGACAGCAGGATGACGCACGTATGAATCTGGCCATCGCACTGACCGCGGCACGCCATGGCGCTGCCATCACGAATCACGTCGAGGTGTTGGAGCTG]
consensusID : consensus_9260#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 704 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGGTCGACGCACGTCGTGTTCGCGGTTGTTCAGTGAGTGAGCTGCCAAAGTTCGAGTTCCAACCATGGTCCGTATCAGCGTGCTGGCCGATGCCCTCAAGTGCATCAACAACGCGGAGAAGCGCGGCAAGCGCCAGGTCCTCATCCGGCCGAACTCGAAGGTCGTGATCAAGTTCCTGACCGTCATGATGAAGCACGGCTACATCGGCGAGTTCGAGATCGTGGACGATCATCGCAGCGGCAAGGTGGTGGTCAATCTGACCGGTCGCCTCAACAAGGCCGGCATCATCTCGCCCCGGTTCGACGTCGCCCTCAACGATATCGAGCGGTGGACCAACAACCTGCTGCCCTCCCGTCAGTTTGGCTACGTCGTCCTGACTACCAGCGGTGGCATCATGGATCACGAGGAGGCCAGGAGGAAGCATCTGGGAGGAAAGATTCTGGGCTACTTCTTCTAGAGTAGACCAGCAACAGCAACTCCCCCTTACCCAGAAACAGCGCTTCATATGCAAAAAATCCACTTACCCACACACACACACACACATACACAAGAACAGGAAAAAGGAAACCGTTTGCCGGGCAAAGCACGCAAGAAACATTCTATCGAACAATCTGGTGATAATTTTTAATTATGTTTTAGTCGATCGAAATTCAAATCTAACTGTTAATAAACTGTACTC]
[+] EMBL BM649946 [CCGCGGACGCGTGGGCGGACGCGTGGGGTCGACGCACGTCGTGTTCGCGGTTGTTCAGTGAGTGAGCTGCCAAAGTTCGAGTTCCAACCATGGTCCGTATCAGCGTGCTGGCCGATGCCCTCAAGTGCATCAACAACGCGGAGAAGCGCGGCAAGCGCCAGGTCCTCATCCGGCCGAACTCGAAGGTCGTGATCAAGTTCCTGACCGTCATGATGAAGCACGGCTACATCGGCGAGTTCGAGATCGTGGACGATCATCGCAGCGGCAAGGTGGTGGTCAATCTGACCGGTCGCCTCAACAAGGCCGGCATCATCTCGCCCCGGTTCGACGTCGCCCTCAACGATATCGAGCGGTGGACCAACAACCTGCTGCCCTCCCGTCAGTTTGGCTACGTCGTCCTGACTACCAGCGGTGGCATCATGGATCACGAGGAGGCCAGGAGGAAGCATCTGGGAGGAAAGATTCTGGGCTACTTCTTCTAGAGTAGACCAGCAACAG ]
[+] EMBL BM599054 [CCGCGGACGCGTGGG TCGT CGTCGACGCACGTCGTGTTCGCGGTTGTTCAGTGAGTGAGCTGCCAAAGTTCGAGTTCCAACCATGGTCCGTATCAGCGTGCTGGCCGATGCCCTCAAGTGCATCAACAACGCGGAGAAGCGCGGCAAGCGCCAGGTCCTCATCCGGCCGAACTCGAAGGTCGTGATCAAGTTCCTGACCGTCATGATGAAGCACGGCTACATCGGCGAGTTCGAGATCGTGGACGATCATCGCAGCGGCAAGGTGGTGGTCAATCTGACCGGTCGCCTCAACAAGGCCGGCATCATCTCGCCCCGGTTCGACGTCGCCCTCAACGATATCGAGCGGTGGACCAACAACCTGCTGCCCTCCCGTCAGTTTGGCTACGTCGTCCTGACTACCAGCGGTGGCATCATGGATCACGAGGAGGCCAGGAGGAAGCATCTGGGAGGAAAGATTCTGGGCTACTTCTTCTAGAGTAGACCAGCAACAGCAACT ]
[+] EMBL BM623308 [ ccgTGATGAAGCACGGCTACATCGGCGAGTTCGAGATCGTGGACGATCATCGCAGCGGCAAGGTGGTGGTCAATCTGACCGGTCGCCTCAACAAGGCCGGCATCATCTCGCCCCGGTTCGACGTCGCCCTCAACGATATCGAGCGGTGGACCAACAACCTGCTGCCCTCCCGTCAGTTTGGCTACGTCGTCCTGACTACCAGCGGTGGCATCATGGATCACGAGGAGGCCAGGAGGAAGCATCTGGGAGGAAAGATTCTGGGCTACTTCTTCTAGAGTAGACCAGCAACAGCAACTCCCCCTTACCCAGAAACAGCGCTTCATATGCAAAAAATCCACTTACCCACACACACACACACACATACACAAGAACAGGAAAAAGGAAACCGTTTGCCGGGCAAAGCACGCAAGAAACATTCTATCGAACAATCTGGTGATAATTTTTAATTATGTTTTAGTCGATCGAAATTCAAATCTAACTGTTAATAAACTGTACTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9260#0 TCGGTTTACGTGCTTGCTGGTGGACACATTTCGTGAGGGATAATTCGCCAAAATGGTCCA 60
consensus_9260#1 -----------------------------------------------------CCGCCCA 7
consensus_9260#2 -----------------------------------------------------CCGCCCA 7
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 -GCGACTGACGCTTCGACGACGCTTGTCGTACAACACCAAGTCTAACAAACGCCGTATTG 119
consensus_9260#1 CGCGTCCGATCCTCCT----CAATCGAAGAACACGCACATGAGTAACGTGCAGCA-ATTA 62
consensus_9260#2 CGCGTCCGCCTTCCAT------CTATCCGGTCGCATTCGCCTTTCGCACGAACCC-GCTA 60
consensus_9260#3 -----CCGCGGACGCG-------TGGGCGGACGCGT--GGGGTCGACGCACGTCG---TG 43
* * * * * * * *
consensus_9260#0 TTCGCACACCAGGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGA 179
consensus_9260#1 ATCGATCAATCGAAGAGCAACTTACATCGAAAAATGTTTAAAAACG----AACAAAAAAA 118
consensus_9260#2 ATCA-ACAATGGCATCGAGACTTCGAAAGTTCGGCGTGACAGCAGCCGGTATCGCGATCG 119
consensus_9260#3 TTCG--CGGTTGTTCAGTGAGTGAGCTGCCAAAGTTCGAGTTCCA-----ACCATGGTCC 96
** * * * * *
consensus_9260#0 AATGCGGCCAGTGCAAGAAGGAGCTGAACGGCATCAAGCCCTCCCGGCCGTGCGAGCGCC 239
consensus_9260#1 AATATCATAACCATACACAAGAACCAAGCC-CAAAAACCCAAGCAAACACCAGAAGTGAA 177
consensus_9260#2 GTGCCGCCCTGTCCACCTATGCCCTGCAGCACAAAGATACGCCCCAGTATCAGGTTCAAA 179
consensus_9260#3 GTATCAGCGTGCTGGCCGATGCCCTCAAGTGCATCAACAACGCGGAGAAGCGCG-GCAAG 155
* * * ** *
consensus_9260#0 CGCGTATGAGCCGCCGCCTGAAGACCGTCACCCGTACGTTCGGTGGTGTCCTGTGCCACC 299
consensus_9260#1 CG-AAATCGACGATAATCTAGTG--CAGCTCCGGTTCGTACGTGGACGCTTTTCCCCGGT 234
consensus_9260#2 TG--GAGGAAATGCAACGTATTCGACGTAAGCGAACGCTGCCTTCACGATCGGAACAGAT 237
consensus_9260#3 CG---CCAGGTCCTCATCCGGC---CGAACTCGAAGGTCGTGATCAAGTTCCTGACCG-T 208
* * * * *
consensus_9260#0 ACTGTCTGCGTGAGCGC-----ATCATCCGTGCATTCCTGATCGACGG--GCAGAAG-GT 351
consensus_9260#1 TTGGCTATGGTGAAAACCG---GCCACATCCGAACCGCTGG-CGACAGCAGCCTTAG-AG 289
consensus_9260#2 CAAGGCGCTGCAGAGCGAC---GAAGAGTACGATGTGCTGATCATCGGTGGTGGA---GC 291
consensus_9260#3 CATGATGAAGCACGGCTACATCGGCGAGTTCGAGATCGTGGACGATCATCGCAGCGGCAA 268
* * * ** * *
consensus_9260#0 CGTGAAGGTGCTGCGCGCTCAGCAGCAGGCCAAGCCGGTCGGCAAACCGGTCAAGGCCCC 411
consensus_9260#1 TGT-AAGACGTTTTATGTTTC-TGTTTTGTTTTTCGTGGTGAGACAGCAATTGGAGCAGG 347
consensus_9260#2 CACTGGGGCCGGTTGTGCACTGGATTCGGTCACGCGCGGACTTAAGACCGCCCTGGTCGA 351
consensus_9260#3 GGTGGTGGTCAATCTGACCGGTCGCCTCAACAAGGCCGGCATCATCTCGCCCCGGTTCGA 328
* * * *
consensus_9260#0 GAAGACCACCAAGACCACCAAGGCCGGTGCCAGCAAATCGAAGTAAGCTCGAGATTGATG 471
consensus_9260#1 CAATTTAAGGGAAACGAGCAAA--CGATTTAGGCAAATGGAAGCTAGA--AGCAACAAAG 403
consensus_9260#2 AGCGGACGACTTCGCCAGCGGT----ACCTCGTCACGATCAACCAAGCTGATCCATGGTG 407
consensus_9260#3 CGTCGCCCTCAACGATATCGAGCGGTGGACCAACAACCTGCTGCCCTCCCGTCAGTTTGG 388
* * ** *
consensus_9260#0 GTGATGGTGGTGGTGGTGGTGTCCTCA-GGGTCTCTGAGAATGCCCGCGCACACGCGGAG 530
consensus_9260#1 ACGCGCGCAGAGGAAGAAAAAAACAGACAAGAAGATAAAAACAAAACCACACGAGCAATG 463
consensus_9260#2 GTGT--GCGATATCTGCAGAAAGCC------ATTCTCGGTTTGGACATTGAACAGTACCG 459
consensus_9260#3 CTAC--GTCGTCCTGACTACCAGCGGTGGCATCATGGATCACGAGGAGGCCAGGAGGAAG 446
* * *
consensus_9260#0 AATGTAGAGGAGGAGGGTGTGTGTGTGTACCACAAGACTATGCTGTCTGCAGAGAGGGGA 590
consensus_9260#1 AATGCAACGAATGCGGTTGGGAA-GTGAAGAGCTAAGGAAAACGG--TGCGGAGA----A 516
consensus_9260#2 GATG--GTAAAAGAAGCTCTGCACGAGCGCGCCTCAATGCTGCGATCGGCGCCAC----A 513
consensus_9260#3 CATCTGGGAGGAAAGATTCTGGGCTACTTCTTCTAGAGTAGACCAGCAACAGCAACTCCC 506
** * * * * *
consensus_9260#0 AAGGACGGGAATGCAATCGCTTCTCCGTGCTTCAACAAAACCATTTACCACCAGTGTCAT 650
consensus_9260#1 ATGGACATGAAGATGTCCTTTTCCCGGTACCGTT---------TTCACTTCCGAT-TCAT 566
consensus_9260#2 TCTGACCAGACCACTGCCGAT----CATGCTTCC-------CGTTTACACCTGGTGGCAA 562
consensus_9260#3 CCTTACCCAGAAACAGCGCTT----CATA-TGCAAAAAATCCACTTACCCACACACACAC 561
** * * * ** **
consensus_9260#0 CTTCCCTCTCTGGCTCAGCTAGCGGCGCTACCCCCCTGGACAAACACATCATCTTGCCCC 710
consensus_9260#1 TCACCCCAACTCGTTCAGC-------GCT-CCTTACTG--CGAGTCAATTATTGT-TTCA 615
consensus_9260#2 ATTCCGTACTT--CTGGGT------CGGTATTAAGGCGTACGATTTCGTCGCTGG----C 610
consensus_9260#3 ACAC-ACATACACAAGAACAGGAAAAAGGAAACCGTTTGCCGGGCAAAGCACGCAAGAAA 620
* *
consensus_9260#0 CACTGTATTATCACGTCGTACGCTGCTTGAAAGCTAGCTTTTTCGCAGTGAAAACC---C 767
consensus_9260#1 GATTGTGTT-------CGATTGGTTGATATAAGCTTGTTCTGCAAAAATGGGGGTTTTTC 668
consensus_9260#2 GATCGTAAC----------------GTGAAAAGCTCGTACTATC-TGTCACGCGCC---- 649
consensus_9260#3 CATTCTATCGA------ACAATCTGGTGATAATTTTTAATTATGTTTTAGTCGATCG--- 671
* * ** * *
consensus_9260#0 AAACCCGACAGCACCTGCCCTCTTTTCTTCTGCCAGTCTTCTTTTGATCTTTTTCATCTT 827
consensus_9260#1 TTATCTAAGGAAACATGCTATATTATTACCTGCAAATGCAATAGGAA------------- 715
consensus_9260#2 -GATGCGCTGGAACTGTTTCCCATGTTGCGCGGCGATAAACTGTG--------------- 693
consensus_9260#3 AAATTCAAATCTAACTGTTAATAAACTGTACTC--------------------------- 704
* *
consensus_9260#0 CTCACCAAAACACCACCACCTCAGCAGCCAGTCGATTAGTGGCCATTTATCATTGTAGTT 887
consensus_9260#1 CAGAGCAGAAAGGAA--ACTTTA-TAATCAATAAAATTAAACCAAATTA--ATTGGAAAA 770
consensus_9260#2 CGGAGCTATCGTGTA---CTACGACGGACAGCAGGATGACGCACGTATGA-ATCTGGGCA 749
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 CGGTAGGGAAAGGCATTACTTCAGCGATCGTTGTGTGAGAGTGTGTGTGTGCGCACGTGC 947
consensus_9260#1 GAGAAAAAAAACCCACAACTTCAA--ACCAAAAAAAAAAAAAAAAAAAGGCCACATGGGC 828
consensus_9260#2 TCGCACTGACCGCGGCACGCCATGGCGCTGCCATCACGAATCACGTCGAGGTGTTGGAGC 809
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 GCCCGCGTGATATATGCTGACAAGTATTTTACTTTAATGTTGAATGTTAGTTTATTTTGC 1007
consensus_9260#1 CCC--------------------------------------------------------- 831
consensus_9260#2 TG---------------------------------------------------------- 811
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 GCTTCTCGGGTCTTCCTGCGATGGGAGCGGAGGAGGAGAGGTCGCGCAACCCAGTTTACA 1067
consensus_9260#1 ------------------------------------------------------------
consensus_9260#2 ------------------------------------------------------------
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 CGATTGAACACGCGAAAACTTGCTCTTCTCTTGCCCAGCCAATAATGATATGCGCGCGTA 1127
consensus_9260#1 ------------------------------------------------------------
consensus_9260#2 ------------------------------------------------------------
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 AGTGCTGATTGAAATTTTAAACAAACGAAACAAGAAATAGACCAAACAGATCAATAAAAG 1187
consensus_9260#1 ------------------------------------------------------------
consensus_9260#2 ------------------------------------------------------------
consensus_9260#3 ------------------------------------------------------------
consensus_9260#0 AAAGCTCTTTAAAACTCCAATGAACAACATCTAGATTGGAGCGAA 1232
consensus_9260#1 ---------------------------------------------
consensus_9260#2 ---------------------------------------------
consensus_9260#3 ---------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||