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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9263#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1122 fasta sequence
[CGTATAAATGTGTGACTTTTTTGTTTATTATGTTCTATGTTTTTTTCCTTGCTTAACTACACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTTGGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTTACGGTGCTTTAGCACATGATGGAATTACACGTAAGTT-AAATGCTTGCAGCATAAATCATTCCACGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTCCTTCGCTG-GCGCTGGCTTTCGCCAGCATCATGTGCTGGGCGGAGGGTGCACTGTGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGAAACGGTAGTCGCTTTGCTGTTCTTAAACATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTTTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCACATAGGCTAGAGTACTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAAA]
[+] EMBL CNS08W14 [CGTATAAATGTGTGACTTTTTTGTTTATTATGTTCTATGTTTTTTTCCTTGCTTAACTACACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTTGGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTTACGGTGCTTTAGCACATGATGGAATTACACGTAAGTT AAATGCTTGCAGCATAAATCATTCCACGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTCCTTCGCTG GCGCTGGCTTTCGCCAGCATCATGTGCTGGGCGGAGGGTGCACTGTGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGAAACGGTAGTCGCTTTGCTGTTCTTAAACATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTTTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCGCCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTTCTGGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTTATCTTTTCCTGCAGTTTCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAAATTAC ]
[-] EMBL CNS08W13 [ TGGAATTACACGTAAGTTAAAATG TTGCAGCATAAATCATTCCACGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTCCTTTGCTGTGC CT GCTTTCGCCAGCATCATGTGCTGGGCGGAGGGTGCACTGTGGGCGCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCGGTAGTCGCTTTGCTGTCCTTAAACATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAAACAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATTTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACG CTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCACATAGGCTAGAGTACTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAAA]
[-] EMBL BX602540 [ GTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTG ]
consensusID : consensus_9263#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1018 fasta sequence
[ATGTGTGACTTTTTTGTTTATTATGTTCTATG-TTTTTTCCTTGCTTAACTACACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTTGGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTTACGGTGCTTTAGCACCATGATGGAATTACACGTAAGTTAAAATG-TTGCAGCATAAATCATTCCAC-GCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTCTCTTTG-TGGCGACTGG-TTTCGCCCGAAAAACATGTCCGCAAACAGACCGCAAAACACGAGCACGGCGCCAACCCACTGCCGGCCGGACAGTGCATTGCCGAAGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACG-CTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCACATAGGCTAGAAGA-ACTGTCGCAAAAGGTACGAACCTT-CGCTCAGCGCGAATTAAATCCCCGAAAGACCCCAGTTG]
[-] EMBL CNS09KFY [ATGTGTGACTTTTTTGTTTATTATGTTCTATG TTTTTTCCTTGCTTAACTACACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTTGGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTTACGGTGCTTTAGCACCATGATGGAATTACACGTAAGTTAAAATG TTGCAGCATAAATCATTCCAC GCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTCTCTTTG TGGCGACTGG TTTCGCCCGAAAAACATGTCCGCAAACAGACCGCAAAACACGAGCACGGCGCCAACCCACTGCCGGCCGGACAGTGCATTGCCGAAGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACG CTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCACATAGGCTAGAAGA ACTGTCGCAAAAGGTACGAACCTT CGCTCAGCGC ]
[+] EMBL CNS09KFZ [ TTGTTTATTATGTTCTATGTTTTTTTCCTTGCTTAACTACACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTTGGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTTACGGTGCTTTAGCA CATGATGGAATTACACGTAAGTT AAATGCTTGCAGCATAAATCATTCCACGGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTGTCCTTTTGCTTTTGCAGCTTCTC CTTCGCTGGCG CTGGCTTTCGCCCGAAAAACATGTCCGCAAACAGACCGCAAAACACGAGCACGGCGCCAACCCACTGCCGGCCGGACAGTGCATTGCCGAAGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATCGGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAACAGGTACGTGAGGGCACTGCTGGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGACCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGTTTCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAAATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTCCCGCGTACTGATCGTGTCAAAAAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCACATAGGCTAG AGATGCT TCGCAAAAGGTACGAACCTTCCGCTCAGCGCGAATTAAATCCCCGAAAGACCCCAGTTG]
consensusID : consensus_9263#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1001 fasta sequence
[TCACCACCGAACAGGCGAGCGCACCGAACGAGGACACCATCATGAAGATGAACAACTGTCCCAGCGCCCCGGTCAGGGCCAGCAGTGTCAGGTGCGTGAAAAGCTCCGGATGCCGGAGAGCGAACAGAACGAACGCTTTGCCTTCGCCGGTCACCAGCAGACCGACGGACACGATCATCGCGCTCCAGCCGTTCATCGCCAGCATCATGTGCTGGGCGGAGGGTGCACTGTGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCGGTAGTCGCTTTGCTGTCCTTAAA-CATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATAC-TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACATAGGCTAGAGATGCTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAGATCCCCGAAAGAACACCGG]
[-] EMBL BX618523 [TCACCACCGAACAGGCGAGCGCACCGAACGAGGACACCATCATGAAGATGAACAACTGTCCCAGCGCCCCGGTCAGGGCCAGCAGTGTCAGGTGCGTGAAAAGCTCCGGATGCCGGAGAGCGAACAGAACGAACGCTTTGCCTTCGCCGGTCACCAGCAGACCGACGGACACGATCATCGCGCTCCAGCCGTTCATCGCCAGCATCATGTGCTGGGCGGAGGGTGCACTGTGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCAGTAGTCGCTTTGCTGTCCTTAAA CATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCGTGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACTAGGGCCAGCATGTAC ]
[-] EMBL BM595483 [ GCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAAAGGCTCATGATCAGTAGTAGCTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCGGTAGTCGCTTTGCTGTCCTTAAA CATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATAC TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACcgg ]
[-] EMBL BM595528 [ CTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCGGTAGTCGCTTTGCTGTCCTTAAA CATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATAC TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACATAGGCTAGAGATGCTcgg ]
[-] EMBL BM582168 [ GGCGCCGGTAGTCGCTTTGCTGTCCTTAAACCATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATAC TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACATAGGCTAGAGATGCTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAGcgg ]
[-] EMBL BM643177 [ AGCAGCACGAAGAGATACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATAC TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACATAGGCTAGAGATGCTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAGATCCCCGAAAGAACACCGG]
[-] EMBL BX603243 [ GGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATCGGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTCGAGCTAATCATGGCCAGCAGGTACGTGAGGGCACTGCTAGCATAGTACGCCTTCGGTGTGCCGTCTTCCGGTTGGGGTGTGATCATGAGAAGTGCTTTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAAC ]
[-] EMBL AL932675 [ TTGCACACACACTGGACGCCCACTAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCACACGAAGATGCCCACGGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGNTAGGAATTTTAGCTAATACGTAAACACTATCAGATCCAATTACAATGCATGGCACGTCCCGNATAGGCTAGAGATGCTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAGATCCC ]
[-] EMBL BM583429 [ TTTTAGCTAATAC TAAACACTAGCAGATCCAACTACAATGCATGGCACGTCCCACATAGGCTAGAGATGCTTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTcgg ]
consensusID : consensus_9263#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence
[GTCTTGGGTGGNCTTGGCCATTTTTCCAGCCTCGCGAGTATGGAGATACAAGTGTTCACAGCAATNACAAGGTACNCTGNGCATATAACAACGGTAGGCACAGGCAGGCCCAATACCCCAACTGCCNGGCCCAGGACCAAGTGGCATTCGCCAGAAGAACAAGCACCAGAGAACAAGGACAGGTGAAGAATTTGCAGCAGTCGTGGTCAACCACCCGGAACAAGGCCGAGCAGCACACGAACGAGGACAACACATCAATGAAGATGGAACAACTGGGCACCAAGCAGCACCACGGTCAAGTGCNCAGCAGTGTCAGGTGCAGTGAAAAGCTCACAGGATGCCAGGAGAGCAGAACAGAACAGAACAGCTTTGGCACTTCAGCCAGGTCACCACAANCAGACCGACAGGACACAGATCATCAGCAGCTCCAGCCAGTTCATCAGCANAGCATCATGTGCTGGCCAGGAGGGTGCACCTGTGGGCCACAGNATGCAGCTCACTGAATCGCACCCAGTCAGCCNCGTCNATCGAAAGGCTCATGATCANTANTAGCTGCCCNATGTTTTCAGTGCTCGAGTACGGCNCCAGTAGTCGCTTTGCTGTCACTTAAACATGAACAGACCTCGGGCGATTCTT]
[-] EMBL AL931055 [GTCTTGGGTGGNCTTGGCCATTTTTCCAGCCTCGCGAGTATGGAGATACAAGTGTTCACAGCAATNACAAGGTACNCTGNGCATATAACAACGGTAGGCACAGGCAGGCCCAATACCCCAACTGCCNGGCCCAGGACCAAGTGGCATTCGCCAGAAGAACAAGCACCAGAGAACAAGGACAGGTGAAGAATTTGCAGCAGTCGTGGTCAACCACCCGGAACAAGGCCGAGCAGCACACGAACGAGGACAACACATCAATGAAGATGGAACAACTGGGCACCAAGCAGCACCACGGTCAAGTGCNCAGCAGTGTCAGGTGCAGTGAAAAGCTCACAGGATGCCAGGAGAGCAGAACAGAACAGAACAGCTTTGGCACTTCAGCCAGGTCACCACAANCAGACCGACAGGACACAGATCATCAGCAGCTCCAGCCAGTTCATCAGCANAGCATCATGTGCTGGCCAGGAGGGTGCACCTGTGGGCCACAGNATGCAGCTCACTGAATCGCACCCAGTCAGCCNCGTCNATCGAAAGGCTCATGATCANTANTAGCTGCCCNATGTTTTCAGTGCTCGAGTACGGCNCCAGTAGTCGCTTTGCTGTCACTTAAACATGAACAGACCTCGGGCGATTCTT]
consensusID : consensus_9263#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence
[ANCCTANATCATGNCCAAGTCANGGTTACGTGAGGGCACCTGCTAGCTATAGTACGCTTTTCGGTGTGCCGTCTTCCGGTTTGGGGCTGTGATCATGAGAAGTGCTTNTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGNCCAGCATGTACGTAAACCGCTCNCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCATCACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTTACAATGCATGGCACGTCCCACCCTCGTGCCGGATTCTTGC]
[-] EMBL BX468787 [ANCCTANATCATGNCCAAGTCANGGTTACGTGAGGGCACCTGCTAGCTATAGTACGCTTTTCGGTGTGCCGTCTTCCGGTTTGGGGCTGTGATCATGAGAAGTGCTTNTTGCGAAAACCCAATTGCACACACACTGGACGCCCACCAGGNCCAGCATGTACGTAAACCGCTCNCCGCGCGATCCATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAAGTAAAAGTAGCATCACGAAGATGCCCACAGCAGAGATTACCAGCGTTTGCTTGTTGTTCGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGGGGTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAATTTACAATGCATGGCACGTCCCACCCTCGTGCCGGATTCTTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9263#0 CGTATAAATGTGTGACTTTTTTGTTTATTATGTTCTATGTTTTTTTCCTTGCTTAACTAC 60
consensus_9263#1 -------ATGTGTGACTTTTTTGTTTATTATGTTCTATGTTTTTT-CCTTGCTTAACTAC 52
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 ------------------------------------------------------------
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 ACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTT 120
consensus_9263#1 ACTATTCAAGGACACAGGTAATAACGTTTACAGCGGGGATAGCAGGTAGAATCTTTTGTT 112
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 ----------------------------------------------------------TC 2
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 GGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTT 180
consensus_9263#1 GGTTCGGAAGAAGCCTTCTGTCACGGTGTGTGCGCATCGTTTGGATTTCATCTTATCTTT 172
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 ACCACCGAACAGGCGAGCG--CACCGAACGAGGACACCATCATGAAGATGAACAACTGTC 60
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 ACGGTGCTTTAGCAC-ATGATGGAATTACACGTAAGTTAAATGCTTGCAGCATAAATCAT 239
consensus_9263#1 ACGGTGCTTTAGCACCATGATGGAATTACACGTAAGTTAAAATGTTGCAGCATAAATCAT 232
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 CCAGCGCCCCGGTCAGGGCCAGCAGTGTCAGGTGCGTGAAAAGCT--CCGGATGCCGGAG 118
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 TCCACGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTG-TCCT 298
consensus_9263#1 TCCACGCGGAGGAGCAATTCAGCGTTTCGCTTCCAGCAGCTCGCCTTCACTCTTG-TCCT 291
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 AGCGAACAGAACGAACGCTTTGCCTTCGCCGGTCACCAGCAGACCGACGGACACGATCAT 178
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 TTTGCTTTTGCAGCTTCTCCTTCGCTGGCGCTGGCTTTCGCCAGCATCATGTGCTGGGCG 358
consensus_9263#1 TTTGCTTTTGCAGCTTCTCTCTTTGTGGCGACTGGTTTCGCCCGAAAAACATGT------ 345
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 CGCGCTCCAGCCGTTCATCGCC----AGCATCATGTGCTGGGCGGAGGGTGCACTG---- 230
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 GAGGGTGCACTGTGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAA 418
consensus_9263#1 -----------------CCGCAAACAG---------------------------ACCGCA 361
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 ------------TGGGCCCGCATGCGCTCCTGAATCGCACCCGTCAGCCCGTCCATCGAA 278
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 AGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGAAACGGTAGTC 478
consensus_9263#1 AAACACGAGCACGGCGCCAACCCACTGCCGGCC----------------GGACAGT---- 401
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 AGGCTCATGATCAGTAGCAGCTGGCCGATGGTTTCGTGCTCGAGTACGGCGCCGGTAGTC 338
consensus_9263#3 ------------------------------------------------------------
consensus_9263#0 GCTTTGCTGTTCTTAAACATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGA 538
consensus_9263#1 GCATTGCCG---------AAGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGA 452
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 GCTTTGCTGTCCTTAAACATGAACAGTACCACGCCCACCACGATCAGCAGCACGAAGAGA 398
consensus_9263#3 -----------GTCTTGGGTGGNCTTGGCCAT-TTTTCCAGCCTCGCGAGTATGGAGATA 48
consensus_9263#0 TACTTCTGCATCGGGTAGCTTTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATC 598
consensus_9263#1 TACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACAGGAATC 512
consensus_9263#4 ------------------------------------------------------------
consensus_9263#2 TACTTCTGCATCGGGTAGCTCTTCCGTCCAACCAGCACGCCAAGCAACATTACGGGAATC 458
consensus_9263#3 CAAGTGTTCACAGCAATNACAAGGTACNCTGNGCATATAACAACGGTAGGCACAGGCAGG 108
consensus_9263#0 GGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTC 658
consensus_9263#1 GGCTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTC 572
consensus_9263#4 ------------------------------------------------------ANCCTA 6
consensus_9263#2 GGTTTTGCCGCCTTCGCCACCACCTGCATCGGGTAGGCGACCCAGCGCAGAGCCATGTTC 518
consensus_9263#3 CCCAATACCCCAACTGCCNGGCCCAGGACCAAGTGGC--ATTCGCCAGAAGAACAAGCAC 166
*
consensus_9263#0 GAGCTAATCATGGCCAACAGGTACGTGAGGGCAC-TGCTGGC-ATAGTACGCC-TTCGGT 715
consensus_9263#1 GAGCTAATCATGGCCAACAGGTACGTGAGGGCAC-TGCTGGC-ATAGTACGC--TTCGGT 628
consensus_9263#4 NATCATGNCCAAGTCAN-GGTTACGTGAGGGCACCTGCTAGCTATAGTACGCTTTTCGGT 65
consensus_9263#2 GAGCTAATCATGGCCAGCAGGTACGTGAGGGCAC-TGCTAGC-ATAGTACGCC-TTCGGT 575
consensus_9263#3 CAGAGAACAAGGACAGGTGAAGAATTTGCAGCAGTCGTGGTCAACCACCCGGAACAAGGC 226
* * * *** * * * ** **
consensus_9263#0 GTGCCGTCTTCCGGTTGGGG--TGTG-ACCATGAGAAGTGCTTTT-GCGAAAACCCAATT 771
consensus_9263#1 GTGCCGTCTTCCGGTTGGGG--TGTG-ACCATGAGAAGTGCTTTT-GCGAAAACCCAATT 684
consensus_9263#4 GTGCCGTCTTCCGGTTTGGGGCTGTG-ATCATGAGAAGTGCTTNTTGCGAAAACCCAATT 124
consensus_9263#2 GTGCCGTCTTCCGGTTGGGG--TGTG-ATCATGAGAAGTGCTTTT-GCGAAAACCCAATT 631
consensus_9263#3 CGAGCAGCACACGAACGAGGACAACACATCAATGAAGATGGAACAACTGGGCACCAAGCA 286
* * ** ** * ** * ** * *** *
consensus_9263#0 GCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACC 831
consensus_9263#1 GCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGAACC 744
consensus_9263#4 GCACACACACTGGACGCCCACCAGGNCCAGCATGTACGTAAACCGCTCNCCGCGCGATCC 184
consensus_9263#2 GCACACACACTGGACGCCCACCAGGGCCAGCATGTACGTAAACCGCTCGCCGCGCGATCC 691
consensus_9263#3 GCACCACGGTCAAGTGCNCAGCAGTGTCAG-GTGCA-GTGAAAAGCTCACAGGATG--CC 342
**** ** ** *** *** ** * ** ** **** * * * **
consensus_9263#0 ATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAA 891
consensus_9263#1 ATCGTCCTGCAG---------------------------------------TATCGCAAA 765
consensus_9263#4 ATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAA 244
consensus_9263#2 ATCGTCCTGCAGCTCGTCACCGTACCGGCCGCGTGTAATCTTTTCCTGCAGTATCGCAAA 751
consensus_9263#3 A--GGAGAGCAGAACAGAACAGAACAGC-----------------------TTTGGCACT 377
* * **** * * ***
consensus_9263#0 GTAAAAGTAGCA-CACGAAGATGCCCACGG--CAGAGATTACCAGCGTTTGCTTGTTGTT 948
consensus_9263#1 GTAAAAGTAGCA-CACGAAGATGCCCACGG--CAGAGATTACCAGCGTTTGCTTGTTGTT 822
consensus_9263#4 GTAAAAGTAGCATCACGAAGATGCCCACAG--CAGAGATTACCAGCGTTTGCTTGTTGTT 302
consensus_9263#2 GTAAAAGTAGCA-CACGAAGATGCCCACAG--CAGAGATTACCAGCGTTTGCTTGTTGTT 808
consensus_9263#3 TCAGCCAGGTCACCACAANCAGACCGACAGGACACAGATCATCAGCAGCTCCAGCCAGTT 437
* ** *** * * ** ** * ** **** * **** * * ***
consensus_9263#0 CGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGG-G 1007
consensus_9263#1 CGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGG-G 881
consensus_9263#4 CGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGG-G 361
consensus_9263#2 CGTCATCGTGCCTGCCGCGTACTGATCGTGTCAGAGAGCAGAGATAACGCGCAGAAGG-G 867
consensus_9263#3 CATCAGCANAGC-ATCATGTGCTGGCCAGG--AGGGTGCACCTGTGGGCCACAGNATGCA 494
* *** * * * ** *** * * ** * *** * * *** * *
consensus_9263#0 GTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAA--TT-ACAATGCATGGCACGT 1064
consensus_9263#1 GTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAA--TT-ACAATGCATGGCACGT 938
consensus_9263#4 GTTGGAATTTTAGCTAATACTAAACACTATCAGATCCAA--TTTACAATGCATGGCACGT 419
consensus_9263#2 GTTGGAATTTTAGCTAATACTAAACACTAGCAGATCCAA--CT-ACAATGCATGGCACGT 924
consensus_9263#3 GCTCACTGAATCGCACCCAGTCAGCCNCGTCNATCGAAAGGCTCATGATCANTANTAGCT 554
* * * ** * * * * * ** * * ** * * *
consensus_9263#0 CCCACATAGGCTAGA-GTACT-TCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAAA 1122
consensus_9263#1 CCCACATAGGCTAGAAGAACTGTCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAAA 998
consensus_9263#4 CCCACCCTCGT--GCCGGATTCTTGC---------------------------------- 443
consensus_9263#2 CCCACATAGGCTAGAGATGCT-TCGCAAAAGGTACGAACCTTCGCTCAGCGCGAATTAGA 983
consensus_9263#3 GCCCNAT--GTTTTCAGTGCT--CGAGTACGGCNCCAGTAGTCGCTTTGCTGTCACTTAA 610
** * * *
consensus_9263#0 --------------------------
consensus_9263#1 TCCCCGAAAGACCCCAGTTG------ 1018
consensus_9263#4 --------------------------
consensus_9263#2 TCCCCGAAAGAACACCGG-------- 1001
consensus_9263#3 ACATGAACAGACCTCGGGCGATTCTT 636
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||