These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9270#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1010 fasta sequence [AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCA-TCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG-TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA-GG-AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA-TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTC] [+] EMBL CNS08VG9 [AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTATACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTTTCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTAC ] [+] EMBL CNS09CRY [ CCCATTCGGAGTAAAGAGAGCA AATTCCTGCTGGAAGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATTGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGC CATTCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GGCAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGAT ] [-] EMBL CNS08VGA [ TTCCTTTCTTCACGATTGCTTTCAACTGAAGTGCTGTTTGTTTACATTAATTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCGCACGCAAACAACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTAAAAAGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTTTTAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATGCTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGC ] [-] EMBL CNS09CRZ [ TGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCA TCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCG TTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCA GG AAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCA TTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTAGCTTTACTTC] consensusID : consensus_9270#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 935 fasta sequence [GGAGACAAAATCGATAGTGTTCAGCCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA-GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT---AAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT] [-] EMBL CNS0955Y [GGAGACAAAATCGATAGTGTTCAGCCCAAACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGAACTATCAAAAACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAG TAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGAACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTTTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCCCCCTCGAGTCGGACGGGCATTCGAAACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAA ] [+] EMBL CNS0955X [ GATAGTGATCAGCCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT] [+] EMBL CNS09MSY [ CCGACACACACGGATAGGGAAATTAAAAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTGCC ] [+] EMBL AGA282907 [ CCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAAAACGC GAAACGGCCGGACGCAAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAGCGATTCGATTCGCTTTACTTTCT AAAAAAAAAAAAAAAA ] [-] EMBL CNS09MSZ [ GCCAGTTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCTTTTTAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTTTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTTTCTGGTCCTGTCCGAGGATGGGTCCGAACACGCTTCCGGCGGCGAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTG TAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGAAACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTT ] [-] EMBL AGA280518 [ CCGGCGGCGAGCTGGAAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAA GCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCT AAAAAAAA ] consensusID : consensus_9270#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 894 fasta sequence [CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC-----AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGA] [+] EMBL BM621159 [CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCG ] [+] EMBL BM625114 [ ccgGCCCCATTCGGAGTAAAGAGAGCACAATTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCATAATAGATGATTGTCCACAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTC AACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGGAAAAACGACGAGCGTAGTGCGAACA ] [+] EMBL BX609224 [ ACAATTCCTGCTGGAATGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCCGTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTGCCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGCGAGCTGG AAAACGATGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAAAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCCGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAACCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGATTTTGTGCGCGCTTTTCGGA] consensusID : consensus_9270#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 530 fasta sequence [GATCGCCGAGGTTCTGCTGGAAGTGAGTAATAGCGCTGTTATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT] [+] EMBL AL931305 [GATCGCCGAGGTTCTGCTGGAAGTGAGTAATAGCGCTGTTATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATGCTTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAGTCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT] [+] EMBL AGA282221 [ GCAGTGCTGTTTGTTTACACTTAGTCGCGCGTCACAATAGATGATTTCCCGCAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCGTAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTTCGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGGCTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGGCAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCCACGGGCAGCTGTGGCTATCTGTCCGTGTC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9270#0 AATTGTTGTTCAATGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAATTCCTGCTGGA 60 consensus_9270#3 ---------------------------------------GATCGCCGAGGTTCTGCTGGA 21 consensus_9270#2 ------------------------------------------------------------ consensus_9270#1 ------------------------------------------------------------ consensus_9270#0 AGTGAGTTAAATAGCGCTGTTAATCGTTAAAGTGCCATTTTTCCTTTCTTCACGATT-GC 119 consensus_9270#3 AGTGAGT--AATAGCGCTGTTA-TCGTTAAAGTGCCATTTTTCCTTTCTTCACGAT--GC 76 consensus_9270#2 ---------------------CCGTGTGGAAATGCCCCATTCGGAGTAAAGAGAGCACAA 39 consensus_9270#1 ------------------------------------------------------------ consensus_9270#0 TTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCG-CGCGTCACAATAGATGATTTCCCG 178 consensus_9270#3 TTTCGACTGCAGTGCTGTTTGTTTACATTTAGTCG-CGCGTCACAATAGATGATTTCCCG 135 consensus_9270#2 TTGCTGCTGGAATGCTGTTTGTTTACATTTAGTCG-CGCGTCATAATAGATGATTGTCCA 98 consensus_9270#1 --------GGAGACAAAATCGATAGTGTTCAGCCGACACACACGGATAGGGAAATT--AA 50 * * * * * ** ** ** * * **** * * consensus_9270#0 CAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCG 238 consensus_9270#3 CAGAAGAAGATTACCGCGTTGGCACCATTAGAAGTGAAGTCAACGAAACATATTCATCCG 195 consensus_9270#2 CAGAAGAAGACTACCGCGTTGGCACCATTAGAAGTGAAGTCAAC-----ATATTCATCCG 153 consensus_9270#1 AAAAAAAACGTGTCTCTTCCATCAATCCTTTCAGTGAAGTCAACGAAACATATTCATCCG 110 * ** ** * ** * ************ *********** consensus_9270#0 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 298 consensus_9270#3 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 255 consensus_9270#2 TAGTTGCGCATATATGCACCACGTTGCATTCGGCTTCACACGCAAACCACACACACCGTT 213 consensus_9270#1 TAGTTGCGCATATATGCACCACGTTGCATTCGGCATCGCACGCAAACCACACACACCGTT 170 ********************************** ** ********************** consensus_9270#0 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 358 consensus_9270#3 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 315 consensus_9270#2 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 273 consensus_9270#1 CGAACGGCCCACGATTCGTTGGGTACTGCGGCGTAGTTGATGAGCACTATCAAATACTGG 230 ************************************************************ consensus_9270#0 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 418 consensus_9270#3 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 375 consensus_9270#2 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 333 consensus_9270#1 CTTCTGGTAGCGTTCCGGCTGTTTACGCATTTTTTCATTTGACAATTTAACCGCATCGGG 290 ************************************************************ consensus_9270#0 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 478 consensus_9270#3 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 435 consensus_9270#2 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGTCC 393 consensus_9270#1 CAGCTAACGCTCACCAGCGCGACGAGCGCATCCGGCGGCACTAGCACTAGCTTCTCGCCC 350 ********************************************************* ** consensus_9270#0 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 538 consensus_9270#3 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 495 consensus_9270#2 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 453 consensus_9270#1 ACGGCCAGCTGTGGCTATCTGTCCGTGTCGAATCTCACGGAGGTGGTGGTGGTAGGTGAG 410 ************************************************************ consensus_9270#0 TCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCC 598 consensus_9270#3 TCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGT------------------------- 530 consensus_9270#2 TCGTCGCCGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCTTTGCCCGAGTGTTGCC 513 consensus_9270#1 TCGTCTCAGTCGCCACAGCAGCATCGGGCCACCGTCAAGAGCCGTTGCCCGAGTGTTGCC 470 ***** * *************************** consensus_9270#0 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 658 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 573 consensus_9270#1 GTTGTCTGTGATAGTGAAAGTAGCAGCGTCGCGATGCTGGACCTGGACCGTCATCCGCTG 530 consensus_9270#0 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 718 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 633 consensus_9270#1 CCGGATCAGCTCGGCTATCTGGTCCTGTCCGAGGATGGGTCCGTACACGCTTCCGGCGGC 590 consensus_9270#0 GAGCTGGAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGAA 778 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 GAGCTGGAAAAACGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGA 693 consensus_9270#1 GAGCTGGAAAA-CGACGAGCGTAGTGCGAACATTATAAGCAACCTGCTAACGCTCACCGA 649 consensus_9270#0 AGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGCC 838 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 AAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGC 753 consensus_9270#1 AAGTGTCGATCCAGCTGTATTCAGTGCACGCTCGTGCAGGAAAGTGTCGATCGTGTTCGC 709 consensus_9270#0 GACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAAC 898 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 CGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAA 813 consensus_9270#1 CGACCACAGCTACACCATATGCCTTTCGAACAAACGCATTTACGTCGTGAAGAAGCGGAA 769 consensus_9270#0 CGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTGA 958 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 CCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTG 873 consensus_9270#1 CCGGCCGGACGCCAGCGCTACCGGCACCCTCGAGTCGGACGGGCATTCGATACTGGCCTG 829 consensus_9270#0 TTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTC-------- 1010 consensus_9270#3 ------------------------------------------------------------ consensus_9270#2 ATTTTGTGCGCGCTTTTCGGA--------------------------------------- 894 consensus_9270#1 ATTTTGTGCGCGCTTTTCGGAACTAAAATAAACGATTCGATTCGCTTTACTTTCTAAAAA 889 consensus_9270#0 ---------------------------------------------- consensus_9270#3 ---------------------------------------------- consensus_9270#2 ---------------------------------------------- consensus_9270#1 AAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGGGCTGTGGTTT 935 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||