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Anopheles gambiae
cluster # 9279 cluster # 9279       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9279#0 length = 1504 sequences # 9  
consensus_9279#1 length = 836 sequences # 2  
consensus_9279#2 length = 670 sequences # 4  

consensusID : consensus_9279#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1504
fasta sequence
                              [ACCCACGCCGCCGGGCGAAGCGCG-TCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT-CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGT-GAAGACCATCAAGCTGGTCGGAATGCGTGAAAACATGGCCGATACCGATTTGTCCGATATTTTGATGGAAGAGGTTGAGCAGAAAGTGAAGGAAGCGGCTGAAATTTCGATGGGCACGGAAATCTCGGAAGAAGACATCACCAACATCCAAAGTCTGTGCGATGAGATCATCTCGATCACTGAATATCGCACCCATCTGGCCGACTATCTGAAGGCGCGTATGATGGCCATGGCACCGAACTTGACTGTGCTGGTGGGCGAGCAGGTCGGTGCTAAG-GAATCGCTTTCTCGGGCTCCTTGGTCAATCTGGCGAAGCATCCTGCTTCCACGCTTCAGATTTTGGGTGCGGAAAAGGCGCTGTTCCGTGCGCTCAAGGCCAAAAAGGACACACCCAAGTACGGTTTGATCTTCCATGCCGGAATGGTCGGTTCCGCGAGCATCAAAAACAAGGGTCGCATCTCGCGATCACTGGCCGCGAAGGCTTCGCTGGCCACCCGTGTGGACGCGTTCGGTGACGATGTGACCATGCAGCTGGGCATTGACCATAGGGCGAAGCTGGAAACGAGACTTCGCATGCTGGAGGAGGGCAACAACAAGCGGTTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAAACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCCAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCGAAAAGAAGAAGATTGAGGAGATAGAGCCGGAATG]

[+] EMBL BM614444             [ACCCACGCGTCCGGGCGAAGCGCG TCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM580942             [       CCGCGAGGCGAAGCGCG TCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM619422             [       CCGCGAGGCGAAGCGCG TCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGT GAAGACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM582310             [          CCGGGCGAAGCGCG TCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM580792             [          CCGGGCGAAGCGCG TCGCCGTCTGGCTGGAATCGGTAAATTATAGTGAAAAATAAGGTCAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGACGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAAATTCTGACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09BCF             [                  AGC CGATCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGTAA CTAAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGTCTGCTGGACGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGT GAAGACCATCAAGCTGGTCGGAATGCGTGAAAACATGGCCGATACCGATTTGTCCGATATTTTGATGGAAGAGGTTGAGCAGAAAGTGAAGGAAGCGGCTGAAATTTCGATGGGCACGGAAATCTCGGAAGAAGACATCACCAACATCCAAAGTCTGTGCGATGAGATCATCTCGATCACTGAATATCGCACCCATCTGGCCGACTATCTGAAGGCGCGTATGATGGCCATGGCACCGAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM604809             [                                                                         ccgATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGTGGAAGACCATCAAGCTGGTCGGCATGCGTGAAAACATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS09BCG             [                                                                                          AAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGTCTGCTGGACGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGT GAAGACCATCAAGCTGGTCGGAATGCGTGAAAACATGGCCGATACCGATTTGTCCGATATTTTGATGGAAGAGGTTGAGCAGAAAGTGAAGGAAGCGGCTGAAATTTCGATGGGCACGGAAATCTCGGAAGAAGACATCACCAACATCCAAAGTCTGTGCGATGAGATCATCTCGATCACTGAATATCGCACCCATCTGGCCGACTATCTGAAGGCGCGTATGATGGCCATGGCACCGAACTTGACTGTGCTGGTGGGCGAGCAGGTCGGTGCTAAG GAATCGCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM653636             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgGGCCATGGCACCGAACTTGACTGTGCTGGTGGGCGAGCAGGTCGGTGCTAGGTTGATCGCTCACTCGGGCTCCTTGGTCAATCTGGCGAAGCATCCTGCTTCCACGCTTCAGATTTTGGGTGCGGAAAAGGCGCTGTTCCGTGCGCTCAAGGCCAAAAAGGACACACCCAAGTACGGTTTGATCTTCCATGCCGGAATGGTCGGTTCCGCGAGCATCAAAAACAAGGGTCGCATCTCGCGATCACTGGCCGCGAAGGCTTCGCTGGCCACCCGTGTGGACGCGTTCGGTGACGATGTGACCATGCAGCTGGGCATTGACCATAGGGCGAAGCTGGAAACGAGACTTCGCATGCTGGAGGAGGGCAACAACAAGCGGTTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAAACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCCAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCGAAAAGAAGAAGATTGAGGAGATAGAGCCGGAATG]


>consensus_9279#0 ACCCACGCCGCCGGGCGAAGCGCGTCGCCGTCTGGCTGGAATCGGTAAATTTTAGTGAAA AATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGA AACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACAACAAATTCAAGGAGATCGA TAACCTGTACCTGGAGTTCGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCA CTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGG CAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAA TGAGCTGCTCGTTGCCGACGCCAAGCTCGGTAACGCGATCAAGGACAAGATGTCGCTGCA GTGTGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAG CTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTCGGTTTGGCCCATTC GCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCGATACGATGATCGTGCAGGC ACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCGCGTACGGGA ATGGTACGGCTGGCACTTCCCCGAACTGGGAAAGATTCTGACCGACAACATAGCGTACGT GAAGACCATCAAGCTGGTCGGAATGCGTGAAAACATGGCCGATACCGATTTGTCCGATAT TTTGATGGAAGAGGTTGAGCAGAAAGTGAAGGAAGCGGCTGAAATTTCGATGGGCACGGA AATCTCGGAAGAAGACATCACCAACATCCAAAGTCTGTGCGATGAGATCATCTCGATCAC TGAATATCGCACCCATCTGGCCGACTATCTGAAGGCGCGTATGATGGCCATGGCACCGAA CTTGACTGTGCTGGTGGGCGAGCAGGTCGGTGCTAAGGAATCGCTTTCTCGGGCTCCTTG GTCAATCTGGCGAAGCATCCTGCTTCCACGCTTCAGATTTTGGGTGCGGAAAAGGCGCTG TTCCGTGCGCTCAAGGCCAAAAAGGACACACCCAAGTACGGTTTGATCTTCCATGCCGGA ATGGTCGGTTCCGCGAGCATCAAAAACAAGGGTCGCATCTCGCGATCACTGGCCGCGAAG GCTTCGCTGGCCACCCGTGTGGACGCGTTCGGTGACGATGTGACCATGCAGCTGGGCATT GACCATAGGGCGAAGCTGGAAACGAGACTTCGCATGCTGGAGGAGGGCAACAACAAGCGG TTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAA ACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCCAAGAAGCTGAAGGCC GAGGATGAAGCGGCCAATGCACCTTCGCCGAAAAGAAGAAGATTGAGGAGATAGAGCCGG AATG



consensusID : consensus_9279#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 836
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGAACGAGGCTTCGCATGCTGGAGGAGGGCAACAACAAGCGGCTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAAACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCGAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCCAAAAAGAAGAAGATTGAGGAGATAGAGCCGGAAATGGGAGAACCCTCGACCGAAAAGAAGAAGAAAAAGAAGAAGAAGAACAAGGACAAAGGAGCGGCCGAAGAAAGTATGATGGATGATAGCGTCGCCGCGGCGGAGGAGGAGACCCCGACGTCGACAAAAAAGAATAAAAAATCCAAAGCGAAAAAGGCAGCCGCGGAGCAGGATGATGAGTAGGGCGGGGTTTTGGTTCGTGGTAGGATTTAGAAAGTTACACTAAAAGGTACATAGATTTATGTATATCTTAAGAGCCAGAAAGGGAGGTAGCGGGAGAATGTTGATAATAGTTTTATCTCCTTGACTTACACTCGCTCGTTGACAGTGACATGTTAGGAAAAGGGCAATGCGCGCTGCCGTGCTGTATATGTTGTACAGCATAGTAACACTTTAAAACCCAGCCAAGTTAACCGCAGCTGGGTAATGAAATTCAGCATTGCTTTACTGTACCAGTTCCAACCTCCAGCATGGCCCGATTTTTTGGAATTTATCTATTTCCAGAAAAGTAAGGCATCGTGTTTCTAATCACACTATAACCGGGTACCAACAGAATCGCTCTTGCAATCTACCAGCGAAACAACAA]

[+] EMBL BM609522             [CCGCCCACGCGTCCGCCCACGCGTCCGAACGAGGCTTCGCATGCTGGAGGAGGGCAACAACAAGCGGCTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAAACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCGAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCCAAAAAGAAGAAGATTGAGGAGATAGAGCCGGAAATGGGAGAACCCTCGACCGAAAAGAAGAAGAAAAAGAAGAAGAAGAACAAGGACAAAGGAGCGGCCGAAGAAAGTATGATGGATGATAGCGTCGCCGCGGCGGAGGAGGAGACCCCGACGTCGACAAAAAAGAATAAAAAATCCAAAGCGAAAAAGGCAGCCGCGGAGCAGGATGATGAGTAGGGCGGGGTTTTGGTTCGTGGTAGGATTTAGAAAGTTACACTAAAAGGTACATAGATTTATGTATATCTTAAGAGCCAGAAAGGGAGGTAGCGGGAGAATGTTGATAATAGTTTTATCTCCTTGACTTACACTCGCTCGTTGACAGTGACATGTTAGGAAAAGGGCAATGCGCGCTGCCGTGCTGTATATGTTGTACAGCATAGTAACACTTTAAAACCCAGCCAAGTTAACCGCAGCTGGGTAATGAA                                                                                                                                                           ]
[+] EMBL BM639866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgGAAAGTTACACTAAAAGGTACATAGATTTATGTATATCTTAAGAGCCAGAAAGGGAGGTAGCGGGAGAATGTTGATAACAGTTTTATCTCCTTGACTTACACTCGCTCGTTGACAGTGACATGTTAGGAAAAGGGCAATGCGCGCTGCCGTGCTGTATATGTTGTACAGCATAGTAACACTTTAAAAACCAGCCAAGTTAAC  CAGCCGGTTAATGAAATTCAGCATTGCTTTACTGTACCAGTTCCAACCTCCAGCATGGCCCGATTTTTTGGAATTTATCTATTTCCAGAAAAGTAAGGCATCGTGTTTCTAATCACACTATAACCGGGTACCAACAGAATCGCTCTTGCAATCTACCAGCGAAACAACAA]


>consensus_9279#1 CCGCCCACGCGTCCGCCCACGCGTCCGAACGAGGCTTCGCATGCTGGAGGAGGGCAACAA CAAGCGGCTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACGCCGTCAGCGA GGTGAAAACGTTCAAGGTCGCCACCGACAGTACGCTTCCTTCCACCTCGTCGAAGAAGCT GAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCCAAAAAGAAGAAGATTGAGGAGAT AGAGCCGGAAATGGGAGAACCCTCGACCGAAAAGAAGAAGAAAAAGAAGAAGAAGAACAA GGACAAAGGAGCGGCCGAAGAAAGTATGATGGATGATAGCGTCGCCGCGGCGGAGGAGGA GACCCCGACGTCGACAAAAAAGAATAAAAAATCCAAAGCGAAAAAGGCAGCCGCGGAGCA GGATGATGAGTAGGGCGGGGTTTTGGTTCGTGGTAGGATTTAGAAAGTTACACTAAAAGG TACATAGATTTATGTATATCTTAAGAGCCAGAAAGGGAGGTAGCGGGAGAATGTTGATAA TAGTTTTATCTCCTTGACTTACACTCGCTCGTTGACAGTGACATGTTAGGAAAAGGGCAA TGCGCGCTGCCGTGCTGTATATGTTGTACAGCATAGTAACACTTTAAAACCCAGCCAAGT TAACCGCAGCTGGGTAATGAAATTCAGCATTGCTTTACTGTACCAGTTCCAACCTCCAGC ATGGCCCGATTTTTTGGAATTTATCTATTTCCAGAAAAGTAAGGCATCGTGTTTCTAATC ACACTATAACCGGGTACCAACAGAATCGCTCTTGCAATCTACCAGCGAAACAACAA



consensusID : consensus_9279#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 670
fasta sequence
                              [CCGCGGACGCGTGGGCGGACGCGTGGGTGCGAGGCGAAGCGCGTCGCCGTCTAGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGT-GCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCG-CCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCG]

[+] EMBL BM600366             [CCGCGGACGCGTGGGCGGACGCGTGGGTGCGAGGCGAAGCGCGTCGCCGTCTAGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGT GCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCG CCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACTACATGATGCG]
[+] EMBL BM597335             [                             ccgGGCGAAGCGCGTCGCCGTCTGGCTGGAATCGGGAAATTATAGTGAAAAATAAGGTCAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCATTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGAGCGTGGCCAACACGTCGGT GCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGT                                                                                         ]
[+] EMBL BM582105             [                                ccgGAAGCGCGTCGCCGTCTAGCTGGAATCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCACCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGT GCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAG                       ]
[+] EMBL BM611623             [                                                                                                                         ccgGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACAACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACAAGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGGCCACCGCTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGGTGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCAAGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGTGGCAGGAGCTGATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCG CCCGACAAGATCGATACGATGATCGTGCAGG                                                    ]


>consensus_9279#2 CCGCGGACGCGTGGGCGGACGCGTGGGTGCGAGGCGAAGCGCGTCGCCGTCTAGCTGGAA TCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCA CCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACA ACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACCGGAAAAGGCCAACA AGATCGTCAAGCTAAAGCACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTCGGCGG CCACCGCTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAGAAGCTGG TGGTGGATGATGTCCAGAATGAGCTGCTCGTTGCCGACGCCAAGCTCGGCAACGCGATCA AGGACAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGTGCAGGAGCTGATGCGTTGCA TCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGATGACGGCCATGT CGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCAAGTTCTCGCCCGACAAGATCG ATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAGGAGCTGAACAACT ACATGATGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9279#0      ------------------ACCCACGC-CGCCGGGCGAAGCGCGTCGCCGTCTGGCTGGAA 41
consensus_9279#2      CCGCGGACGCGTGGGCGGACGCGTGGGTGCGAGGCGAAGCGCGTCGCCGTCTAGCTGGAA 60
consensus_9279#1      ----------CCGCCCACGCGTCCGCCCACGCGTCCGAACGAGGCTTCGCATGCTGGAGG 50
                                         *    *    *  * *  * ** * *  **  *    *   

consensus_9279#0      TCGGTAAATTTTAGTGAAAAATAAGCTGATAAGTATTGGCGTAAGCCTAAAAGTGTAGCA 101
consensus_9279#2      TCGGTAAATTTTAGTGAAAAATAAGCTGAAAAGTATTGGCGCAAGCCTAAAAGTGTAGCA 120
consensus_9279#1      AGGGCAACAACAAGCGGCTGTCGGGCGTGAAGGCGAAGGCTAAGCTGCAGAAGTTCCACG 110
                        ** **     ** *        **    * *    ***  *     * ****    * 

consensus_9279#0      CCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGTTGGATGACA 161
consensus_9279#2      CCATGTTCGTTCTTTACGAAACACCGGCAGGATATGCCATATTCAAGCTGCTGGATGACA 180
consensus_9279#1      CCGTCAGCGAGGT-----GAAAACGTTCAAGGT-CGCCACCGACAGTACGCTTCCTTCCA 164
                      ** *   **   *      ** **   ** * *  ****    **    * *   *  **

consensus_9279#0      ACAAATTCAAGGAGATCGATAACCTGTACCTGGAGTTCGAAACACC---GGAAAAGGCCA 218
consensus_9279#2      ACAAATTCAAGGAGATCGACAACCTGTACCTGGAGTTTGAAACACC---GGAAAAGGCCA 237
consensus_9279#1      CCTCGTCGAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCACCTTCGCCCAAAAAGA 224
                       *   *  *** ** *  *   *  * *    * *    *  ****   *   **    *

consensus_9279#0      ACAAGATCGTCAAGCTAAAGC--ACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTC 276
consensus_9279#2      ACAAGATCGTCAAGCTAAAGC--ACTTTGAAAAGTTTGCCGACACTACGGAAGCTCTTTC 295
consensus_9279#1      AGAAGATTGAGGAGATAGAGCCGGAAATGGGAGAACCCTCGACCGAAAAGAAGAAGAAAA 284
                      * ***** *   ** ** ***      **  *       ****   *  ****       

consensus_9279#0      GGCGGCCACCG--CTGCCGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAG 334
consensus_9279#2      GGCGGCCACCG--CTGCAGTGGAGGGCAAACTGTCCAAGCCGTTGAAGAAGGCACTGAAG 353
consensus_9279#1      AGAAGAAGAAGAACAAGGACAAAGGAGCGGCCGAAGAAAGTATGATGGATGATAGCGTCG 344
                       *  *     *  *        ***     * *   **    *    ** *  *  *  *

consensus_9279#0      AAGCTGGTGGTGGATGATGTCCAGA-ATGAGCTGCTCGTTGCCGACG--CCAAGCTCGGT 391
consensus_9279#2      AAGCTGGTGGTGGATGATGTCCAGA-ATGAGCTGCTCGTTGCCGACG--CCAAGCTCGGC 410
consensus_9279#1      CCGC-GGCGGAGGAGGAGACCCCGACGTCGACAAAAAAGAATAAAAAATCCAAAGCGAAA 403
                        ** ** ** *** **   ** **  *   *            *    ****       

consensus_9279#0      AACGCGATCAAGGA-CAAGATGTCGCTGCAGTGTGTGGCCAACACGTCGGTGCAGGAGCT 450
consensus_9279#2      AACGCGATCAAGGA-CAAGATGTCGCTGCAGTGCGTGGCCAACACGTCGGTGCAGGAGCT 469
consensus_9279#1      AAGGCAGCCGCGGAGCAGGATGATGA-GTAGGGCGGGGTTT-TGGTTCGTGGTAGGATTT 461
                      ** **   *  *** ** ****  *  * ** * * **        ***  * ****  *

consensus_9279#0      GATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGAT 510
consensus_9279#2      GATGCGTTGCATCCGCACGCAGTCGGAAAGCTTGCTCTCCGGGCTGCCCAAGAAGGAGAT 529
consensus_9279#1      AGAAAGTTACACTAAAAGGTACATAGATTTATGTATATCTTAAGAGCCAGAAAGGGAGGT 521
                           *** **     * * *    **    *   * **      ***  * * **** *

consensus_9279#0      GACGGCCATGTCGCTCGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCA--AGTTCTCG 568
consensus_9279#2      GACGGCCATGTCGCTGGGTTTGGCCCATTCGCTTTCTCGCTACAAGCTCA--AGTTCTCG 587
consensus_9279#1      AGCGGGAGAATGTTGATAATAGTTTTATCTCCTTGACTTACACTCGCTCGTTGACAGTGA 581
                        ***     *        * *    **   ***       **  ****        *  

consensus_9279#0      CCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAG 628
consensus_9279#2      CCCGACAAGATCGATACGATGATCGTGCAGGCACAGTGCCTGCTGGATGATCTGGACAAG 647
consensus_9279#1      CATGTTAGGAAAAGGGCAATGCGCGCTGCCGTGCTGTATATGTTGTACAGCATAG-TAAC 640
                      *  *  * **      * ***  **     *  * **   ** ** *     * *  ** 

consensus_9279#0      GAGCTGAA---CAACTACATGATGCGCGTACGGGAATGGTACGGCTGGCACTTCCCCGAA 685
consensus_9279#2      GAGCTGAA---CAACTACATGATGCG---------------------------------- 670
consensus_9279#1      ACTTTAAAACCCAGCCAAGTTAACCGCAGCTGGGTAATG-AAATTCAGCATTGCTTT--A 697
                          * **   ** * *  * *  **                                  

consensus_9279#0      CTGGGAAAGATTCTGACCGACAACATAGCGTACGTGAAGACCATCAAGCTGGTC---GGA 742
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      CTGTACCAG-TTCCAACCTCCAGCATGGCCCGATTTTTTGGAATTTATCTATTTCCAGAA 756
                                                                                  

consensus_9279#0      ATGCGTGAAAACATGGCCGATACCGATTTGTC-CGATATTTTGATGGAAGAGGTTGAGCA 801
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      AAGTAAGGCATCGTGTTTCTAATCACACTATAACCGGGTACCAACAGAATCGCTCTTGCA 816
                                                                                  

consensus_9279#0      GAAAGTGAAGGAAGCGGCTGAAATTTCGATGGGCACGGAAATCTCGGAAGAAGACATCAC 861
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ATCTACCAGCGAAACAACAA---------------------------------------- 836
                                                                                  

consensus_9279#0      CAACATCCAAAGTCTGTGCGATGAGATCATCTCGATCACTGAATATCGCACCCATCTGGC 921
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      CGACTATCTGAAGGCGCGTATGATGGCCATGGCACCGAACTTGACTGTGCTGGTGGGCGA 981
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      GCAGGTCGGTGCTAAGGAATCGCTTTCTCGGGCTCCTTGGTCAATCTGGCGAAGCATCCT 1041
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      GCTTCCACGCTTCAGATTTTGGGTGCGGAAAAGGCGCTGTTCCGTGCGCTCAAGGCCAAA 1101
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      AAGGACACACCCAAGTACGGTTTGATCTTCCATGCCGGAATGGTCGGTTCCGCGAGCATC 1161
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      AAAAACAAGGGTCGCATCTCGCGATCACTGGCCGCGAAGGCTTCGCTGGCCACCCGTGTG 1221
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      GACGCGTTCGGTGACGATGTGACCATGCAGCTGGGCATTGACCATAGGGCGAAGCTGGAA 1281
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      ACGAGACTTCGCATGCTGGAGGAGGGCAACAACAAGCGGTTGTCGGGCGTGAAGGCGAAG 1341
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      GCTAAGCTGCAGAAGTTCCACGCCGTCAGCGAGGTGAAAACGTTCAAGGTCGCCACCGAC 1401
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      AGTACGCTTCCTTCCACCTCGTCCAAGAAGCTGAAGGCCGAGGATGAAGCGGCCAATGCA 1461
consensus_9279#2      ------------------------------------------------------------
consensus_9279#1      ------------------------------------------------------------
                                                                                  

consensus_9279#0      CCTTCGCCGAAAAGAAGAAGATTGAGGAGATAGAGCCGGAATG 1504
consensus_9279#2      -------------------------------------------
consensus_9279#1      -------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)