These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 615 fasta sequence [GATCCCCCGAGGTTAACGGCGCAGCACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTTACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTACGAACGCGGCGATACGATCGAAATCCCTCGTAGTGTGTCGACAGTTGCGCAACGGGCTGAAGGATATGACTCGCTGGAGCTTCAACGAGTGTCTTGCGTACCGTCCGTTTATGATCGCCTTGCAGCCTCAGCTAGCGGTGCTGGATAAGTTTGTCATTCAGCAGGAATCCATTCCGTCGCTGATGCACACGAACCGCCGTGACGGGGGTTTCAGCCTTTTCGCCGCTCGTGATGGGTAGCATGCACACTTTCCGCGATAGTGAGGCGCCCGCTGCAGGCGTTGCTGTGGGCGGAAGCAAGGGGCTTAACCAAAGCCAAGGCGAGTCGCGGAATGTAGGCAACTCCAGTGTCAATAGCACCATGCAGCGCATGAGCTCGGCTGGTACAGTTGGGGCGGAAGCGTTGCGCTTTCAAGTGAAAGTGGTGGCGNTTGCGTGGTGGTGGCACTATCACCGGAACAATCGGCATCGT] [+] EMBL AL695364 [GATCCCCCGAGGTTAACGGCGCAGCACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTTACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTACGAACGCGGCGATACGATCGAAATCCCTCGTAGTGTGTCGACAGTTGCGCAACGGGCTGAAGGATATGACTCGCTGGAGCTTCAACGAGTGTCTTGCGTACCGTCCGTTTATGATCGCCTTGCAGCCTCAGCTAGCGGTGCTGGATAAGTTTGTCATTCAGCAGGAATCCATTCCGTCGCTGATGCACACGAACCGCCGTGACGGGGGTTTCAGCCTTTTCGCCGCTCGTGATGGGTAGCATGCACACTTTCCGCGATAGTGAGGCGCCCGCTGCAGGCGTTGCTGTGGGCGGAAGCAAGGGGCTTAACCAAAGCCAAGGCGAGTCGCGGAATGTAGGCAACTCCAGTGTCAATAGCACCATGCAGCGCATGAGCTCGGCTGGTACAGTTGGGGCGGAAGCGTTGCGCTTTCAAGTGAAAGTGGTGGCGNTTGCGTGGTGGTGGCACTATCACCGGAACAATCGGCATCGT] consensusID : consensus_928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 248 fasta sequence [AAGTGTCGACGATGTGCCGCGGTGCAGGTGGCCTGCAGAACATAACGCTTGGCGAGCAAAGCTTCAGCCAAGCGATGGAGAAAAACATTTCGAAGCAAAGCAAATCGAACCGGCGCAAGCAACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTTACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTACGAACGCG] [+] EMBL AGA282024 [AAGTGTCGACGATGTGCCGCGGTGCAGGTGGCCTGCAGAACATAACGCTTGGCGAGCAAAGCTTCAGCCAAGCGATGGAGAAAAACATTTCGAAGCAAAGCAAATCGAACCGGCGCAAGCAACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTTACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTACGAACGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_928#0 ------------------------------------------------------------ consensus_928#1 AAGTGTCGACGATGTGCCGCGGTGCAGGTGGCCTGCAGAACATAACGCTTGGCGAGCAAA 60 consensus_928#0 --------------------------------GATCCCCCGAGGTTAA--CGGCGCAGC- 25 consensus_928#1 GCTTCAGCCAAGCGATGGAGAAAAACATTTCGAAGCAAAGCAAATCGAACCGGCGCAAGC 120 * * * * * ******* consensus_928#0 -ACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTT 84 consensus_928#1 AACACAAGCTAGAGATTCGCATGCGTTACCTGTTGCAGATATTCACCGAGGCAAACTGTT 180 *********************************************************** consensus_928#0 ACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTA 144 consensus_928#1 ACGAGTTTGCGCTCCTGCTCTCCGTGCTGCTACTCGACGTGGCCTCCGTCGGGCGCATTA 240 ************************************************************ consensus_928#0 CGAACGCGGCGATACGATCGAAATCCCTCGTAGTGTGTCGACAGTTGCGCAACGGGCTGA 204 consensus_928#1 CGAACGCG---------------------------------------------------- 248 ******** consensus_928#0 AGGATATGACTCGCTGGAGCTTCAACGAGTGTCTTGCGTACCGTCCGTTTATGATCGCCT 264 consensus_928#1 ------------------------------------------------------------ consensus_928#0 TGCAGCCTCAGCTAGCGGTGCTGGATAAGTTTGTCATTCAGCAGGAATCCATTCCGTCGC 324 consensus_928#1 ------------------------------------------------------------ consensus_928#0 TGATGCACACGAACCGCCGTGACGGGGGTTTCAGCCTTTTCGCCGCTCGTGATGGGTAGC 384 consensus_928#1 ------------------------------------------------------------ consensus_928#0 ATGCACACTTTCCGCGATAGTGAGGCGCCCGCTGCAGGCGTTGCTGTGGGCGGAAGCAAG 444 consensus_928#1 ------------------------------------------------------------ consensus_928#0 GGGCTTAACCAAAGCCAAGGCGAGTCGCGGAATGTAGGCAACTCCAGTGTCAATAGCACC 504 consensus_928#1 ------------------------------------------------------------ consensus_928#0 ATGCAGCGCATGAGCTCGGCTGGTACAGTTGGGGCGGAAGCGTTGCGCTTTCAAGTGAAA 564 consensus_928#1 ------------------------------------------------------------ consensus_928#0 GTGGTGGCGNTTGCGTGGTGGTGGCACTATCACCGGAACAATCGGCATCGT 615 consensus_928#1 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||