These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9287#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1108 fasta sequence [CCGGCAATCTCGAGTTCACTCATTAGGAAAATTACTTCTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA-TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT--GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC-TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA-TGT-CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC-TTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGG-AGATGCAATAAGCACTGGTTCTGATGATAG-T-CGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGTTGATTTTTCCGTGAGTGGACGTCTGCTATTCGCCGGTTATAATGATTATACAGTAAACGTGTGGGATACCCTTAAGGCACAACGCGTATGTCTTCTATACGGCCATGAAAACAAAGTATCTTGTCTTCAAGTATCTCCGGATGGTACAGCACTATCCACCGGAAGTTGGGAC] [+] EMBL BM584257 [CCGGCAATCTCGAGTTCACTCATTAGGAAAATTACTTCTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGATTAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTTTGGCTTGTGGTGGACTAGATATTAAGGTAACAGTTTACCCTATAACTTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATTGTCCCTGTTGTATTTTCCCTAATTCTGATCAGCA ] [+] EMBL BM614243 [ ccgGGAAAATTACTTCTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAA ] [+] EMBL BX621589 [ AAAATTACTTCTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCCTTTTGAANGGCACCAGTCAGATATAAACAGCGTGAAATTTCTTCCTAGTGG AGATGCAATAAGCACTGGTTCTGATGATAG T ac ] [+] EMBL BX609246 [ AACAGTCCCGTGCATGATGGCTGAAGTTCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGGTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGT ATGTGGTGCAGTCC TTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGG AGATGCAATAAGCACTGGTTCTGATGATA TGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGT ] [+] EMBL BX619745 [ CATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATT ] [+] EMBL BX618046 [ CCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC TTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGGAAGATGC ATAAGCACTGGTTCTGATGATAG TACGTGTCGCTTATTTG ] [+] EMBL BM640031 [ ccgCAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC TTTGAAG ] [+] EMBL BX610450 [ CAACATCCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAAGGCTCGAAGTCGAAACGGGAAGAAGAACGTCAAAAGTGGAACGAAGTTACTGGGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTCCTGAAAGGCCATCAGGCAAAAGTACTGGGTCCTAACGGGTCTCCGGACAAGCGACACATAGTATCTCCATCCCAAGAAGGCAAATTGATCATg ] [+] EMBL BM599507 [ ccgCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGA TAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTT GCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAAC TCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACA TGT CCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC TTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGG AGATGCAATAAGCACTGGTTCTGATGATAGTT CGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGTTGATTTTTCCGTGAGTGGACGTCTGCTATTCGCCGGTTATAATGATTATACAGTAAA ] [+] EMBL BX614532 [ ATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC TTTGAAGGTCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGG AGATGCAATAAGCACTGTTTCTGATGATAG TACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGTTGATTTTTCCGTGAGTGGACGTCTGCTATTCGCCGGTTATAATGATTATACAGTAAACGTGTGGGATACCCTTAAGGCACAACGCGTATGTCTTCTATACGGCCATGAAAACAAAGTATCTTGTCTTCAAGTATCTCCGGATGGTACAGCACTATCCACCGGAAGTTGGGAC] [+] EMBL BX617462 [ TGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCC TTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGG AGATGCAATAAGCACTGGTTCTGATGATAG TACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGC ATATTTGGAGTTAATTGTGTTGATTTTTCCGTGAGTGGACGTCTGCTATTCGCCGGTTATAATGATTATACAGTAAACGTGTG ] consensusID : consensus_9287#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence [CTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTGTATTATGATAATAGTAATCGATAACCGGACAAATATTTCAATTAATTTCTGTTTTACATTTATTTCAGTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGATAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAACTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATGTCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGNCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGNAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATAT] [+] EMBL BX624552 [CTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTGTATTATGATAATAGTAATCGATAACCGGACAAATATTTCAATTAATTTCTGTTTTACATTTATTTCAGTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACAAGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGACTAACAAAGAACATGCTGTTACTATGCCAACGACATGGATAATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAACTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATGTCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGNCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGNAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATAT] consensusID : consensus_9287#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence [AATNCCCGAGGTAAATGCTGTTACTATGCCAACGACATGGATATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAACTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATGTCCTGTCTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGTGATAGCGGNGACTCTACAGTGTGCCCTGTGGGACTGGTACGAATCATGGTCCNACTGTTTGCACANAAGGTGTGTGCCAGTGGGANCCACTAACACGCGGAGAGTCGTTTCACTCGGTGCAAAACCCCGAGTGTATCAGGCNTCCCGCGTTAAAATTGTGAAAACCAGCGGTGCGTAGATNACAACCTTTACGGGTNACTCCTTGGGTGNAANGACCTAGGCTGACGTNCAACAATGCGGGNTNTCATTNCTAGTACACTAGGTCGCNGTACATGTCCCGNACTCCNGGCGCTGTCCACAATCNACTATNGGGGCGGTNCANAACGTAGGCCCCCTTTNCCGNGGCACT] [+] EMBL AL929611 [AATNCCCGAGGTAAATGCTGTTACTATGCCAACGACATGGATATGGGATGTTCTTATGCCCCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAACTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATGTCCTGTCTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGTGATAGCGGNGACTCTACAGTGTGCCCTGTGGGACTGGTACGAATCATGGTCCNACTGTTTGCACANAAGGTGTGTGCCAGTGGGANCCACTAACACGCGGAGAGTCGTTTCACTCGGTGCAAAACCCCGAGTGTATCAGGCNTCCCGCGTTAAAATTGTGAAAACCAGCGGTGCGTAGATNACAACCTTTACGGGTNACTCCTTGGGTGNAANGACCTAGGCTGACGTNCAACAATGCGGGNTNTCATTNCTAGTACACTAGGTCGCNGTACATGTCCCGNACTCCNGGCGCTGTCCACAATCNACTATNGGGGCGGTNCANAACGTAGGCCCCCTTTNCCGNGGCACT] consensusID : consensus_9287#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence [TCGAGCAGAATCGGCACGAGGNTNGTGAAGGACATTTCATCAAGGAAGAACAACAGTGGGAACACACACAAGCTACATGTCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCCTTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGGAGATGCAATAAGCACTGGTTCTGATGATAGGTACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTCGTTATTCTGTAAAGATAGCATTGATATTTGGAGTTCAATTGTGTTGATTTNTACCGTGAGTGGACGTACTGCAATNTCAGCCAGGATTATAAGTGATTATACAGTAAACGTGTGGGATACCCTT] [+] EMBL BX469373 [TCGAGCAGAATCGGCACGAGGNTNGTGAAGGACATTTCATCAAGGAAGAACAACAGTGGGAACACACACAAGCTACATGTCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACATGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGAGATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTATCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCCTTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGGAGATGCAATAAGCACTGGTTCTGATGATAGGTACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTCGTTATTCTGTAAAGATAGCATTGATATTTGGAGTTCAATTGTGTTGATTTNTACCGTGAGTGGACGTACTGCAATNTCAGCCAGGATTATAAGTGATTATACAGTAAACGTGTGGGATACCCTT] consensusID : consensus_9287#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 472 fasta sequence [CAGAATCGCCACGAGGNTATGAAACAGGTATACATTTGTACTCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCCTTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGGAGATGCAATAAGCACTGGTTCTGATGATAGTACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGTTGATTTATTCCGTGAGTGGACGTCTGCTATTCGCNGGTTATACATGATTATACAGTAAACGTGTGGGATACCCTTAAGGCACAACGCGTATGTCTTCTATACAGGCCATGAAAACNAAAGTATACTNTGTCTTCAAGTATCTCCGGATGGTACAGCGACTATCCACCGGAAGTTGGGACTATACGCTAAAGGATCTGGGCNTTA] [+] EMBL BX466518 [CAGAATCGCCACGAGGNTATGAAACAGGTATACATTTGTACTCTGGAAGCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTCCTTTGAAGGGCACCAGTCAGATATAAACAGCGTGAAATTTCATCCTAGTGGAGATGCAATAAGCACTGGTTCTGATGATAGTACGTGTCGCTTATTTGATATGAGAGCCGACAAGGAAGTTGCTGTTTTCTGTAAAGATAGCATTATATTTGGAGTTAATTGTGTTGATTTATTCCGTGAGTGGACGTCTGCTATTCGCNGGTTATACATGATTATACAGTAAACGTGTGGGATACCCTTAAGGCACAACGCGTATGTCTTCTATACAGGCCATGAAAACNAAAGTATACTNTGTCTTCAAGTATCTCCGGATGGTACAGCGACTATCCACCGGAAGTTGGGACTATACGCTAAAGGATCTGGGCNTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 CCGGCAATCTCGAGTTCACTCATTAGGAAAATTACTTCTATTCATAAAACATAGAAACAG 60 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 TCCCGTGCATGATGGCTGAAGTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCAC 120 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 TTATCAAGGAAGCTGAATGCTTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACG 180 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 ATGTTACTTTGTCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAAC 240 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 CCCGTCGCGTTCTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTCCGGACA 300 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 AGCGACACATAGTATCTTCATCCCAAGATGGCAAATTGATCATTTGGGATGCATTTACGA 360 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 CTAACAAAGAACATGCTGTTACTATGCCAACGACATGGATAATGGGATGTTCTTATGCCC 420 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 -----------------------------------------TCGAGCAGAATCGGCACGA 19 consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 CTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATAA 480 consensus_9287#1 ------------------------------------------------------------ consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 GGNTNGTGAAGGACATTTCATCAAGGAAGAACAACAGTGGGAACACACACAAGCTACATG 79 consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 CTCTTGAAGAGGACATTTCATCAAGGAAGAA-AACAGTGGGAACACACACAAGCTACATG 539 consensus_9287#1 -----------------CTATTCATAAAACATAGAAACAGTCCCGTGCATGATGGCTGAA 43 consensus_9287#2 ---------------------------------------------------------AAT 3 consensus_9287#3 TCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACA 139 consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 TCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACA 599 consensus_9287#1 GTGCTTACCAGTTTACAACATTCTGATAAAGTATCTGCACTTATCAAGGAAGCTGAATGC 103 consensus_9287#2 NCCCGAGGTAAATGCTGTTACTATGCCAACGA---CATGGATATGGGATGTTCTTATGCC 60 consensus_9287#3 TGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGA 199 consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 TGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGCCATACAGGA 659 consensus_9287#1 TTGAAGTCGAAACTGGAAGAAGAACGTCAAAAGTTGAACGATGTTACTTGTATTATGATA 163 consensus_9287#2 CCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATA 120 consensus_9287#3 GATGTTATG-TCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTA-TCTGGAA 257 consensus_9287#4 --------C-AGAATCGCCACGAGGNT--ATGAAACAGGTA-TACATTTGTACTCTGGAA 48 consensus_9287#0 GATGTTATG-TCAATCGATTTAGCTCCTAATGAAACAGGTAATACATTTGTA-TCTGGAA 717 consensus_9287#1 ATAGTAATCGATAACCGGACAAATATTTCAATTAATTTCTGTTTTACATTTATTTCAGTG 223 consensus_9287#2 ACTCTTGAAGAGGA-CATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACAT 179 * * * ** * * consensus_9287#3 GCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTC---CT 314 consensus_9287#4 GCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTC---CT 105 consensus_9287#0 GCTGTGATAAGATGGCTTTTATATGGGATATGCGATCTGGTCATGTGGTGCAGTC---CT 774 consensus_9287#1 TCGTCTCTGGCGGAACGTCTGGAAATGATCAGCTATTTGAACATTAAACCCCGTCGCGTT 283 consensus_9287#2 GTCCTGTCTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGTGATAGCGGNG-ACT 238 * *** ** * * * * * consensus_9287#3 TTGAAGGGC-ACCAGTCAGATATAAACAGCGTGAAATTTCATC-CTAGTGGAGATGCAAT 372 consensus_9287#4 TTGAAGGGC-ACCAGTCAGATATAAACAGCGTGAAATTTCATC-CTAGTGGAGATGCAAT 163 consensus_9287#0 TTGAAGGGC-ACCAGTCAGATATAAACAGCGTGAAATTTCATC-CTAGTGGAGATGCAAT 832 consensus_9287#1 CTGAAAGGCCATCAGGCAAAAGTACTTTGTTCTAACTGGTCTC-CGGACAAGCGACACAT 342 consensus_9287#2 CTACAGTGTGCCCTGTGGGACTGGTACGAATCATGGTCCNACTGTTTGCACANAAGGTGT 298 * * * * * * * * consensus_9287#3 AAGC--ACTGGTTCTGATGATA-GGTACGTGTCGCTT-ATTTGATATG-----AGAGCCG 423 consensus_9287#4 AAGC--ACTGGTTCTGATGATA-G-TACGTGTCGCTT-ATTTGATATG-----AGAGCCG 213 consensus_9287#0 AAGC--ACTGGTTCTGATGATA-G--TCGTGTCGCTT-ATTTGATATG-----AGAGCCG 881 consensus_9287#1 AGTA--TCTTCATCCCAAGATG-G---CAAATTGATC-ATTTGGGATGCATTTACGACTA 395 consensus_9287#2 GTGCCAGTGGGANCCACTAACACGCGGAGAGTCGTTTCACTCGGTGCAAAACCCCGAGTG 358 * * * * * * * * * consensus_9287#3 ACAAGGAAGTTGCTCGTTA-TTCTGTAAAGATAGCATTGATATTTGGA-GTTCAATTGTG 481 consensus_9287#4 ACAAGGAAGTTGCT-GTT--TTCTGTAAAGATAGCATT-ATATTTGGA-GTT-AATTGTG 267 consensus_9287#0 ACAAGGAAGTTGCT-GTT--TTCTGTAAAGATAGCATT-ATATTTGGA-GTT-AATTGTG 935 consensus_9287#1 ACAAAGAACATGCT-GTT---ACTATGCCAACGACATGGATAATGGGATGTTCTTATGCC 451 consensus_9287#2 TATCAGGCNTCCCGCGTTAAAATTGTGAAAAC--CAGCGGTGCGTAGATNAC-AACCTTT 415 * * *** * * * ** * ** consensus_9287#3 TTGATTTNTACCGTGAGTGGACGTACTGCAATNTCAGCCAGGATTATAAGTGATTATACA 541 consensus_9287#4 TTGATTTATTCCGTGAGTGGACGT-CTGCTATT----CGCNGGTTATACATGATTATACA 322 consensus_9287#0 TTGATTT-TTCCGTGAGTGGACGT-CTGCTATT----CGCCGGTTATA-ATGATTATACA 988 consensus_9287#1 CCTTCCGGAAACCTTGTTGCTTGTGGTGGACTAGATAATAAGGTAACAGTTTACCCTATA 511 consensus_9287#2 ACGGGTNACTCCTTGGGTGNAANGACCTAGGCTGAC-GTNCAACAATGCGGGNTNTCATT 474 * * ** * * consensus_9287#3 GTAAACGTGTGGGATACCC--TT------------------------------------- 562 consensus_9287#4 GTAAACGTGTGGGATACCC--TTAAGGCACAACGCGTATGTCTTCTATACAGGCCATGAA 380 consensus_9287#0 GTAAACGTGTGGGATACCC--TTAAGGCACAACGCGTATGTCTTCTATAC-GGCCATGAA 1045 consensus_9287#1 ACTCTTGAAGAGGACATTTCATCAAGGAAGAAAACAGTGGGAACACACACAAGCTACATG 571 consensus_9287#2 NCTAGTACACTAGGTCGCNGTACATGTCCCGNACTCCNGGCGCTGTCCACAATCNACTAT 534 * consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 AACNAAAGTATACTNTGTCTTCAAGTATCTCCGGATGGTACAGCGACTATCCACCGGAAG 440 consensus_9287#0 AACAAAG---TATCTTGTCTTCAAGTATCTCCGGATGGTACAGC-ACTATCCACCGGAAG 1101 consensus_9287#1 TCCTGTTGTATTTTCCCTAATTCTGATCAGCAAATTTTAACTGGTAGCGGTGACTCTACA 631 consensus_9287#2 NGGGGCGGTNCANAACGTAGGCCCCCTTTNCCGNGGCACT-------------------- 574 consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 TTGGGACTATACGCTAAAGGATCTGGGCNTTA---------------------------- 472 consensus_9287#0 TTGGGAC----------------------------------------------------- 1108 consensus_9287#1 TGTGCCCTGTGGGATGTAGAATCAGGTCAGCTGTTGCAAAGTTTCCATGGNCATACAGGA 691 consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ------------------------------------------------------------ consensus_9287#4 ------------------------------------------------------------ consensus_9287#0 ------------------------------------------------------------ consensus_9287#1 GATGTTATGTCAATCGATTTAGCTCCTAATGAAACAGGNAATACATTTGTATCTGGAAGC 751 consensus_9287#2 ------------------------------------------------------------ consensus_9287#3 ----------------------------- consensus_9287#4 ----------------------------- consensus_9287#0 ----------------------------- consensus_9287#1 TGTGATAAGATGGCTTTTATATGGGATAT 780 consensus_9287#2 ----------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||