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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9290#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 2997 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGAGACTCAATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGACGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGGTGGAGCGTCTGCAGGAAGCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGCAAACTTGATCCGGGCGTCCACCACCTCCATGACGTCCGTGCCGAAGCCGCTCAAGTTTATGCGTCCGCACTACGAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAAGCTGAAGGACGTCAACACGCTGAAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGATGACGATGGGCACCGGCAAGGAGTGCCTGGTGTACCGGTTGTTGAGCGACAACAGCACCGAGAGCCTCGGTGAGTGGGGTCACGAGTATGTGCGACACCTGTCCGGCGAGATAGCCGCCAACTGGCCGGAATCGACGGACAATCTGTTCAAAAACCGCCTCATCGAGCTGATCCATCAGATCATCCCGTACAACATGGCGCATAACGCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTCGACCTGCTGGAGAACTACGTGGACGAGAGTGCGTACCCGCGGGTCTGTCTGTATCTGCAGAGCTGCGTGCCGTACGTGGCCGAGCCGGAGAACGTGAGCCTGCTCAAGTGTGCGCTGAATCTGTCGCGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTCGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAGATCATGTCCAATTCCCATCTAAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTACAAAAACAAGGAGCACGGTATGCTGAGTGCGACCGCTTCGCTCGGACTGATACTGCTGTGGGATGTGGACGGTGGTCTGACCCCGATTGACAAGTATTTGTACTCGAACGAGGATTACATCAAGTCGGGCGCACTGCTGGCCTGCGGTATCGTAAACTGTGGCGTACGCAATGAGGTCGATCCGGCGCTGGCCCTGCTGTCGGGAC-ACGTGCTGCATCAGAACACAACGATGCGCATCGGCGCCATCCTTGGGCTGGGTTTGGCGTACGC-TGG-TCGAACCGGTCGGTGGTGCTGGAGCTGATTGGCTCGGTGTTCAGCTCGGAGCGTCGCACGGGCTCAAACATGGAGGTGATGGGCATTGCGGCCCTCTCGCTCGGTATGATTGCCGTCGGCTCGTGCAACAGCGAGGTGACGGAAGTGCTACTGCAGATCATTATGGATCGCAGCGAGGCCGATCTGAAGGATACCTACGCTCGCTTCCTGCCGCTTGGTCTTGGACTGGTGTACCTTGGCCGGCAGGAGGCGGTCGAAGCGGTTACGGCTGCGCTCGAGATAGTGGCCGAACCGTTCCGCTCGATGGCCACCACCATGGTGGAAATCTGCGCATACGCCGGCACGGGCAATGTGCTGAAAATCCAGCAACTACTCCATCTCTGCTCGGAGCATTACGAACCGTCGGCTTCGTCGAGCGAGGAACCGGCGTCCAAGAAGTCCGAATCGAAGGACACCAACAACAAGGAAAAGGAGGACAAGGAAAAGGATCTCTCTGGATGCCAGGCGGTGGCCGTGCTCGGTATTGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCATTCCGCTCGTTCGGAAATCTGCTGCGCTACTGTGAGCCGTGCATA-CGCCGAGCGGTCCCGCTAGCTC-TTGGGTTGA-TTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACGCTGAGCAAATTTTCGCACGACAGCGACGCCGAGGTAGCGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCAGCTGGCGCAGTATCACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTACGTTCACGATCAGCCCGTACCACAGCGATCGGCAGCTGATGAGCCCGGTTGCTGTTGCCGGCCTGATGGCGGCACTTGTCTCGTTCCTGGACGTGAAGAACATTATTCTTGGCAAATCGCACTACTTGCTGTACACCCTAACGACCGCCATGCAACCGCGCATGCTAATTACATTCACCGAAGACTTGAACTCATGCCCCGTCCCAGTCCGTGTCGGAATGGCCGTAGACGTCGTCGGACAGGCGGGTAAGCCCAAAACCATTACCGGCTTCCAGACACACACCACTCCGGTACTTCTGGCCATGGGCGAACGTGCCGAACTGGCGA-CCGAGGAGTACATCTCCTTGACACCGATCATGGAAGGGTTCTGCATTTTGCGAAAAAATCCCAACTATGTCCCGTAAAGAGCAGCGACGACTAGCAACCGCCGTGTTTCCCTCCCAGCTGTTTTGCGAAACCCTTCAACCTCCCGCTTGTCATCATTGAAGTGTGGTAACCGTATCCTGTCACGCAATCAGGGGAAGGAATAGCACGCATTCAGTTACAAACGGCCCGCGCTGGTCGATTTATTACTG-TACACAAAAAAAGAAACATTTACTTATACACTTAGGATCGTAATAAATAAAGATTTTCGAAACAGTAAAAAAA]
[+] EMBL BM619557 [CCGCCCACGCGTCCGCCCACGCGTCCGGAGACTCAATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGACGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGGTGGAGCGTCTGCAGGAAGCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGCAAACTTGATCCGGGCGTCCACCACCTCCATGACGTCCGTGCCGAAGCCGCTCAAGTTTATGCGTCCGCACTACGAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAAGCTGAAGGACGTCAACACGCTGAAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGATGACGATGGGCACCGGCAAGGAGTGCCTGGTGTACCGGTTGTTGAGCGACAACAGCACCGAGAGCCTCGGTGAGTGGGGTCACGAGTATGTGCGACACCTGTCCGGCGAGATAGCCGCCAACTGGCCGGAATCGACGGACAATCTGTTCAAAAACCGCCTCATCGAGCTGATCCATCAGATCATCCCGTACAACATGGCGCATAACGCGGAGGCGGAAGCGTG ]
[+] EMBL BM655542 [ ccgCACCTGTCCGGCGAGATAGCCGCCAACTGGCCGGAATCGACGGACAATCTGTTCAAAAACCGGCTCATCGAGCTGATCCATCAGATCATCCCGTACAACATGGCGCATAACGCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTCGACCTGCTGGAGAACTACGTGGACGAGAGTGCGTACCCGCGGGTCTGTCTGTATCTGCAGAGCTGCGTGCCGTACGTGGCCGAGCCGGAGAACGTGAGCCTGCTCAAGTGTGCGCTGAATCTGTCGCGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTCGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAGATCATGTCCAATTCCCATCTAAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGC ]
[+] EMBL BM613878 [ ccgGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTTGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAGATCATGTCCAATTCCCATCTGAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTACAAAAACAAGGAGCACGGTATGCTGAGTGCGACCGCTTCGCTCGGACTGATACTGCTGTGGGATGTGGACGGTGGTCTGACCCCGATTGACAAGTATTTGTACTCGAACGAGGATTACATCAAGTCGGGCGCACTGCTGGCCTGCGGTATCGTAAACTGTGGCGTACGCAATGAGGTCGATCCGGCGCTGGCCCTGCTGTCGGGAC ]
[+] EMBL BM656637 [ ccGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTACAAAAACAAGGAGCACGGTATGCTGAGTGCGACCGCTTCGCTCGGACTGATACTGCTGTGGGATGTGGACGGTGGTCTGACCCCGATTGACAAGTATTTGTACTCGAACGAGGATTACATCAAGTCGGGCGCACTGCTGGCCTGCGGTATCGTAAACTGTGGCGTACGCAATGAGGTCGATCCGGCGCTGGCCCTGCTGTC GGACTACGTGCTGCATCAGAACACAACGATGCGCATCGGCGCCATCCTTGGGCTGGGTTTGGCGTACGC TGGCTCGAACCGGTCGGTGGTGCTGGAGCTGATTGGCTCGGTGTTCAGCTCGGAGCGTCGCACGGGCTCAAACATGGAGGTGATGGGCATTGCGGCCCTCTCGCTCGGTATGATTGCCGTCGGCTCGTGCAACAGCGAGGTGACGGAAGTGCTACTGCAGATCATTATGGATCGCAGCGAGGCCGATCTGAAGGATACCTACGCTCGCTTCCTGCCGCTTGGTCTTGGACTGGTGTACCTTG ]
[+] EMBL BM608732 [ ccGCGGACGCGTGG GCGAACCGGTCGGTGGTGCTGGAGCTGATTGGCTCGGTGTTCAGCTCGGAGCGTCGCACGGGCTCAAACATGGAGGTGATGGGCATTGCGGCCCTCTCGCTCGGTATGATTGCCGTCGGCTCGTGCAACAGCGAGGTGACGGAAGTGCTACTGCAGATCATTATGGATCGCAGCGAGGCCGATCTGAAGGATACCTACGCTCGCTTCCTGCCGCTTGGTCTTGGACTGGTGTACCTTGGCCGGCAGGAGGCGGTCGAAGCGGTTACGGCTGCGCTCGAGATAGTGGCCGAACCGTTCCGCTCGATGGCCACCACCATGGTGGAAATCTGCGCATACGCCGGCACGGGCAATGTGCTGAAAATCCAGCAACTACTCCATCTCTGCTCGGAGCATTACGAACCGTCGGCTTCGTCGAGCGAGGAACCGGCGTCCAAGAAGTCCGAATCGAAGGACACCAACAACAAGGAAAAGGAGGACAAGGAAAAGGATCTCTCTGGATGCCAGGCGGTGGCCGTGCTCGGTATTGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCATTCCGCTCGTTCGGCAATCTGCTGCGCTACTGTGAGCCGTGCATA CGCCGAGCGGTCCCGCTAGCTC TTGGGTTGATTTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACG ]
[+] EMBL BM598527 [ ccgGGAGGTGCTCCTGCAGATCATTATGGATCGCAGCGAGGCCGATCTGAAGGACACCTACGCTCGCTTCCTGCCGCTCGGTCTTGGACTGGTGTACCTTGGCCGGCAGGAGGCGGTCGAAGCGGTTACGGCTGCGCTCGAGATAGTGGCCGAACCGTTCCGCTCGATGGCCACCACCATGGTGGAAATCTGCGCATACGCCGGCACGGGCAATGTGCTGAAAATCCAGCAACTACTCCATCTCTGCTCGGAGCATTACGAACCGTCGGCTTCGTCGAGCGAGGAACCGGCGTCCAAGAAGTCCGAATCGAAGGACACCAACAACAAGGAAAAGGAGGACAAGGAAAAGGATCTCTCTGGATGCCAGGCGGTGGCCGTGCTCGGTATTGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCATTCCGCTCGTTCGGAAATCTGCTGCGCTACTGTGAGCCGTGCATACCGCCGAGCGGTCCCGCTAGCTCTTTGGGTTGA TTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACGCTGAGCAAAT ]
[+] EMBL BX617734 [ GGCGGTGGCCGTGCTCGGTATTGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCATTCCGCTCGTTCGGAAATCTGCTGCGCTACTGTGAGCCGTGCATA CGCCGAGCGGTCCCGCTAGCTC TTGGGTTGA TTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACGCTGAGCAAATTTTCGCACGACAGCGACGCCGAGGTAGCGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCAGCTGGCGCAGTATCACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTACGTTCACGATCAGCCCGTACCACAGCGATCGGCAGCTGATGAGCCCGGTTGCTGTTGCCGGCCTGATGGCGGCACTTGTCTCGTTCCTGGACGTGAAGAACATTATTCTTGGCAAATCGCACTACTTGCTGTACACCCTAACGACCGCCATGCAACCGCGCATGCTAATTACATTCACCGAAGACTTGAACTCATGCCCCGTCCCAGTCCGTGTCGGAATGGCCGTAGACGTCGTCGGACAGGCGGGTAAGCCCAAAACCATTACCGGCTTCCAGACACACACCACTCCGGTACTTCTGGCCATGGGCGAACGTGCCGAACTGGCGACCCGA GAGTACATCTCCTTGACA ]
[+] EMBL BX608451 [ TGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCATTCCGCTCGTTCGGAAATCTGCTGCGCTACTGTGAGCCGTGCATA CGCCGAGCGGTCCCGCTAGCTC TTGGGTTGA TTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACGCTGAGCAAATTTTCGCACGACAGCGACGCCGAGGTAGCGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCAGCTGGCGCAGTATCACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTACGTTCACGATCAGCCCGTACCACAGCGATCGGCAGCTGATGAGCCCGGTTGCTGTTGCCGGCCTGATGGCGGCACTTGTCTCGTTCCTGGACGTGAAGAACATTATTCTTGGCAAATCGCACTACTTGCTGTACACCCTAACGACCGCCATGCAACCGCGCATGCTAATTACATTCACCGAAGACTTGAACTCATGCCCCGTCCCAGTCCGTGTCGGAATGGCCGTAGACGTCGTCGGACAGGCGGGTAAGCCCAAAACCATTACCGGCTTCCAGACACACACCACTCCGGTACTTCTGGCCATGGGCGAACGTGCCGAACTGGCGA CCGAGGAGTACATCTCCTTGACACCGATCAT ]
[+] EMBL AGA284402 [ CGGTTGCTGTTGCCGGCCTGATGGCGGCACTTGTCTCGTTCCTGGACGTGAAGAATATTATTCTTGGCAAATCGCACTACTTGCTGTACACCCTAACGACCGCCATGCAACCGCGCATGCTAATTACATTCACCGAAGACTTGAACTCATGTCCCGTCCCAGTCCGTGTCGGAATGGCCGTAGACGTTGTCGGACAGGCGGGTAAGCCTAAAACCATTACCGGCTTCCAGACACACACCACCCCGGTGCTGCTGGCCATGGGCGAACGTGCCGAACTGGCGA CCGAGGAGTACATC ]
[-] EMBL CNS0991H [ CAACCGGGCATGGTAATTACATTCACGGAAGACTTGAACTCTTGTCCCGTCCCAGTCCGTGTCGGAATGGCCGTAGACGTCGTCGGACAGGCGGGTAAGCCCAAAACCATTACCGGCTTCCAGACACACACCACTCCGGTACTTCTGGCCATGGGCGAACGTGCCGAACTGGCGA CCGAGGAGTACATCTCCTTGACACCGATCATGGAAGGGTTCTGCATTTTGCGAAAAAATCCCAACTATGTCCCGTAAAGAGCAGCGACGACTAGCAACCGCCGTGTTTCCCTCCCAGCTGTTTTGCGAAACCCTTCAACCTCCCGCTTGTCATCATTGAAGTGTGGTAACCGTATCCTGTCACGCAATCAGGGGAAGGAATAGCACGCATTCAGTTACAAACGGCCCGCGCTGGTCGATTTATTACTG TACACAAAAAAAGAAACATTTACTTATACACTTAGGATCGTAATAAATAAAGATTTTCG ]
[-] EMBL AGA285708 [ gCTGGCCATGGGCGAACGTGCCGAACTGGCGA CCGAGGAGTACATCTCCTTGACACCGATCATGGAAGGGTTCTGCATTTTGCGAAAAAATCCCAACTATGTCCCGTAAAGAGCAGCGACGACTAGCAACCGCCGTGTTTCCCTCCCAGCTGTTTTGCGAAACCCTTCAACCTCCCGCTTGTCATCATTGAAGTGTGGTAACCGTATCCTGTCACGCAATCAGGGGAAGGAATAGCAAGCATTCAGTTACAAACGGCCCGCGCGTGTCGATTTATTACTGCTACACAAAAAAAGAAACATTTACTTATACACTTAGGATCGTAATAAATAAAGATTTTCGAAACAGTAAAAAAA]
consensusID : consensus_9290#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 936 fasta sequence
[ATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCGCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGCCGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGGCGCATAACGCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTGGACCTGCTGGAGAACTACGTGGACGAGAGTGCGTATCCGCGGGTCTGTCTGTATCTGCAGAGCTGCGTGCCGTACGTGGCCGAGCCGGAGAACGTGAGCCTGCTCAAGTGTGCGCTGAATCTGTCGCGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTTGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAGATCATGTCCAATTCCCATCTGAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTACAAAAACAAGGAGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCACCTGGCCAGTAATCACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTACGTTCACGATCAGCCCGTACCACAGCGA]
[+] EMBL CNS0991G [ATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCGCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGCCGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGGCGCATAACGCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTGGACCTGCTGGAGAACTACGTGGACGAGAGTGCGTATCCGCGGGTCTGTCTGTATCTGCAGAGCTGCGTGCCGTACGTGGCCGAGCCGGAGAACGTGAGCCTGCTCAAGTGTGCGCTGAATCTGTCGCGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTTGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAGATCATGTCCAATTCCCATCTGAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTACAAAAACAAGGAGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCACCTGGCCAGTAATCACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTACGTTCACGATCAGCCCGTACCACAGCGA]
consensusID : consensus_9290#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 439 fasta sequence
[CCGGGGAAGCAGCACCGACCGACACACAATTGTTCAGTGTAATTTTCAGCAAACAACAAGAGACTCAATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGACGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGGTGGAGCGTCTGCAGGAAGCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGCAAACTTGATCCGGGCGTCCACCACCTCCATGACGTCCGTGCCGAAGCCGCTCAAGTTTATGCGTCCGCACTACGAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAAGCTGAAGGACGTCAACACGCTGAAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGATGACGATGGGCAC]
[+] EMBL BM603612 [CCGGGGAAGCAGCACCGACCGACACACAATTGTTCAGTGTAATTTTCAGCAAACAACAAGAGACTCAATCCAACGGTAACATGTCTACAGCGGAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGACGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGGTGGAGCGTCTGCAGGAAGCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGCAAACTTGATCCGGGCGTCCACCACCTCCATGACGTCCGTGCCGAAGCCGCTCAAGTTTATGCGTCCGCACTACGAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAAGCTGAAGGACGTCAACACGCTGAAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGATGACGATGGGCAC]
[+] EMBL BM637597 [ AAGAGCCCGTGGTGAAAAGCAAGGGCAAGGACAAGGAAGACGAAAAGACTGAGCTGTCGGACGAAGATAAGCACCTGCAGGATGAGCTGAACGTGCTGGTGGAGCGTCTGCAGGAACCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGTGAACTTGATCCGGG ]
consensusID : consensus_9290#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 201 fasta sequence
[GCCCAGGGGTGGACCCAGCGGGGCAAGGGTACGTGCACGACCAGCCCGTACCACAGCGATCGGCAGCTGAAGAGCCCGGGTGCTGTGGCCGGCCTGATGGCGGCACTGGTCTCGTGCCTGGACGTGAAGAATATGATACTGGGCAATCGCACTACTCGCTGTACACCCTAACGACCGCCATGCAACCGCGCAGGCTAATGA]
[+] EMBL BX612308 [GCCCAGGGGTGGACCCAGCGGGGCAAGGGTACGTGCACGACCAGCCCGTACCACAGCGATCGGCAGCTGAAGAGCCCGGGTGCTGTGGCCGGCCTGATGGCGGCACTGGTCTCGTGCCTGGACGTGAAGAATATGATACTGGGCAATCGCACTACTCGCTGTACACCCTAACGACCGCCATGCAACCGCGCAGGCTAATGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9290#0 CCGCCCACGCGTCCGCCCACGCGTCCGGAGACTCAATCCAACGGTAACATGTCTACAGCG 60
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAGACGAAAAGACT 120
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGGTGGAGCGTCTG 180
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CAGGAAGCCGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGGCAAACTTGATCCGG 240
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GCGTCCACCACCTCCATGACGTCCGTGCCGAAGCCGCTCAAGTTTATGCGTCCGCACTAC 300
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAAGCTGAAGGACGTCAACACGCTG 360
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGATGACGATGGGCACCGGCAAGGAGTGC 420
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CTGGTGTACCGGTTGTTGAGCGACAACAGCACCGAGAGCCTCGGTGAGTGGGGTCACGAG 480
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TATGTGCGACACCTGTCCGGCGAGATAGCCGCCAACTGGCCGGAATCGACGGACAATCTG 540
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TTCAAAAACCGCCTCATCGAGCTGATCCATCAGATCATCCCGTACAACATGGCGCATAAC 600
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTCGACCTGCTGGAGAAC 660
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TACGTGGACGAGAGTGCGTACCCGCGGGTCTGTCTGTATCTGCAGAGCTGCGTGCCGTAC 720
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GTGGCCGAGCCGGAGAACGTGAGCCTGCTCAAGTGTGCGCTGAATCTGTCGCGCAAGTTC 780
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGAGCTGATCAAG 840
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTTCATGCTCGGC 900
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGATCTGGTCGAG 960
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 ATCATGTCCAATTCCCATCTAAACCACCATTTCCTCAATCTGGCCCGCGAGCTGGACATT 1020
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 ATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTCGCGCGCCCCG 1080
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGTGAACGGGTTC 1140
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAAGTGGCTGTAC 1200
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAAAACAAGGAGCACGGTATGCTGAGTGCGACCGCTTCGCTCGGACTGATACTGCTGTGG 1260
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GATGTGGACGGTGGTCTGACCCCGATTGACAAGTATTTGTACTCGAACGAGGATTACATC 1320
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAGTCGGGCGCACTGCTGGCCTGCGGTATCGTAAACTGTGGCGTACGCAATGAGGTCGAT 1380
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CCGGCGCTGGCCCTGCTGTCGGGACACGTGCTGCATCAGAACACAACGATGCGCATCGGC 1440
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GCCATCCTTGGGCTGGGTTTGGCGTACGCTGGTCGAACCGGTCGGTGGTGCTGGAGCTGA 1500
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TTGGCTCGGTGTTCAGCTCGGAGCGTCGCACGGGCTCAAACATGGAGGTGATGGGCATTG 1560
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CGGCCCTCTCGCTCGGTATGATTGCCGTCGGCTCGTGCAACAGCGAGGTGACGGAAGTGC 1620
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TACTGCAGATCATTATGGATCGCAGCGAGGCCGATCTGAAGGATACCTACGCTCGCTTCC 1680
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TGCCGCTTGGTCTTGGACTGGTGTACCTTGGCCGGCAGGAGGCGGTCGAAGCGGTTACGG 1740
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CTGCGCTCGAGATAGTGGCCGAACCGTTCCGCTCGATGGCCACCACCATGGTGGAAATCT 1800
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GCGCATACGCCGGCACGGGCAATGTGCTGAAAATCCAGCAACTACTCCATCTCTGCTCGG 1860
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AGCATTACGAACCGTCGGCTTCGTCGAGCGAGGAACCGGCGTCCAAGAAGTCCGAATCGA 1920
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AGGACACCAACAACAAGGAAAAGGAGGACAAGGAAAAGGATCTCTCTGGATGCCAGGCGG 1980
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TGGCCGTGCTCGGTATTGCGCTGATTGCGATGGGCGAGGAGATCGGTGCCGAAATGGCAT 2040
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 TCCGCTCGTTCGGAAATCTGCTGCGCTACTGTGAGCCGTGCATACGCCGAGCGGTCCCGC 2100
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ------------------------------------------------------------
consensus_9290#2 ---------------------------------------CCGGGGAAGCAGCACCGACCG 21
consensus_9290#0 TAGCTCTTGGGTTGATTTCCGTCTCGAACCCGAAGCTGAACATACTGGACACGCTGAGCA 2160
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 ----------------------------------------------ATCCAACGGTAACA 14
consensus_9290#2 ACACACAATTGTTCAGTGTAATTTTCAGCAAACAACAAGAGACTCAATCCAACGGTAACA 81
consensus_9290#0 AATTTTCGCACGACAGCGACGCCGAGGTAGCGCACAATGCCATCTTTGCGATGGGTTTGG 2220
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 TGTCTACAGCGGAGAAAATTGAAGAGCGCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAG 74
consensus_9290#2 TGTCTACAGCGGAGAAAATTGAAGAGCCCGTGGTGAAAAGCAAGGGCAAGGAGAAGGAAG 141
consensus_9290#0 TCGGAGCGGGAACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCAGCTGGCGCAGTATC 2280
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 CCGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGGCGC 134
consensus_9290#2 ACGAAAAGACTGAGCTGTCGGACGAAGATAAGCAGCTGCAGGATGAGCTGAACATGCTGG 201
consensus_9290#0 ACGCCAAGGACCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGG 2340
consensus_9290#3 --------------------------------------GCCCAGGGGTGGACCCAGCGGG 22
consensus_9290#1 ATAACGCGGAGGCGGAAGCGTGCGATCTGTTGATGGAGATCGAACGGCTGGACCTGCTGG 194
consensus_9290#2 TGGAGCGTCTGCAGGAAGC---CGACGTGGAGCTGTACCGCCCGTCGCTGGAAGCGATGG 258
* * **
consensus_9290#0 GCAAGGGTACGTTCACGATCAGCCCGTA-CCACAG--CGATCGGCAGCTGATGAGCCCGG 2397
consensus_9290#3 GCAAGGGTACGTGCACGACCAGCCCGTA-CCACAG--CGATCGGCAGCTGAAGAGCCCGG 79
consensus_9290#1 AGAAC--TACGTGGACGAG-AGTGCGTATCCGCGGGTCTGTCTGTATCTGCAGAGCT-GC 250
consensus_9290#2 CAAACTTGATCCGGGCGTCCACCACCT--CCATGA---CGTCCGTGCCGAAGCCGCTCAA 313
** * ** * * * ** ** * * **
consensus_9290#0 TTGCTGTTGCCGGCCTGATGGCGGCAC--TTGTCTCGTTCCTGGACGTGAAGAACATTAT 2455
consensus_9290#3 GTGCTGTGGCCGGCCTGATGGCGGCAC--TGGTCTCGTGCCTGGACGTGAAGAATATGAT 137
consensus_9290#1 GTGCCGTACGTGGCCGAGCCGGAGAACG-TGAGCCTGCTCAAGTGTGCGCTGAATCTGTC 309
consensus_9290#2 GTT---TATGCGTCCGCACTACGAAGCGATGAAGGAGATCCATAAGAAGATGACGGCCAA 370
* * * ** * * * * * **
consensus_9290#0 TCTTGGCAAATCGCACTACTTGCTGTACACCCTAACGACCGCCATG--CAACCGCGCAT- 2512
consensus_9290#3 ACTGGGCAA-TCGCACTACTCGCTGTACACCCTAACGACCGCCATG--CAACCGCGCAG- 193
consensus_9290#1 GCGCAAGTTCAACCAGCACACGCAGGCGATGCGGCTGGCCATGATGATCAACGATACGGA 369
consensus_9290#2 GCTGAAGGA-CGTCA--ACACGCTGAAGCTGTGCGCGGAAATCATCTCTGTGCTGGCGAT 427
* ** ** ** * * ** *
consensus_9290#0 GCTAATTACATTCACCGAAGACTTGAACTCATGCCCCGTCCCAGTCCGTGTCGGAATGGC 2572
consensus_9290#3 GCTAATGA---------------------------------------------------- 201
consensus_9290#1 GCTGATCAAGGAAATCTTTATGTCGTGCGGCGACAGTGCGGTACAGAAGCAGCTGGCGTT 429
consensus_9290#2 GACGATGGGCAC------------------------------------------------ 439
* **
consensus_9290#0 CGTAGACGTCGTCGGACAGGCGGGTAAGCCCAAAACCATTACCGGCTTCCAGACACACAC 2632
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 CATGCTTGGCCGGCAGCAGATTTTCCTCGAGCTGCCGGAGGGAATGAACGACTACGACGA 489
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CACTCCGGTACTTCTGGCCATGGGCGAACGTGCCGAACTGGCGACCGAGGAGTACATCTC 2692
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 TCTGGTCGAGATCATGTCCAATTCCCATCTGAACCACCATTTCCTCAATCTGGCCCGCGA 549
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 CTTGACACCGATCATGGAAGGGTTCTGCATTTTGCGAAAAAATCCCAACTATGTCCCGTA 2752
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 GCTGGACATTATGGAGCCCAAGACGCCCGAAGACGTGTACAAGTCGCACTTGGACAACTC 609
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAGAGCAGCGACGACTAGCAACCGCCGTGTTTCCCTCCCAGCTGTTTTGCGAAACCCTTC 2812
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 GCGCGCCCCGTTCGGTTCGCAGATCGATTCGGCCCGCCAGAACCTGGCCGCCAGCTTCGT 669
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AACCTCCCGCTTGTCATCATTGAAGTGTGGTAACCGTATCCTGTCACGCAATCAGGGGAA 2872
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 GAACGGGTTCGTGAATGCCGGCTTCGGGCAGGACAAGCTACTGATGGAGGACGGCAACAA 729
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 GGAATAGCACGCATTCAGTTACAAACGGCCCGCGCTGGTCGATTTATTACTGTACACAAA 2932
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 GTGGCTGTACAAAAACAAGGAGCACAATGCCATCTTTGCGATGGGTTTGGTCGGAGCGGG 789
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAAAGAAACATTTACTTATACACTTAGGATCGTAATAAATAAAGATTTTCGAAACAGTAA 2992
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 AACGAACAACGCGCGTTTGGCGTCGATGCTGCGCCACCTGGCCAGTAATCACGCCAAGGA 849
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 AAAAA------------------------------------------------------- 2997
consensus_9290#3 ------------------------------------------------------------
consensus_9290#1 CCCGAACAACCTGTTCATGGTGCGCATCGCCCAGGGTTTGACCCATCTGGGCAAGGGTAC 909
consensus_9290#2 ------------------------------------------------------------
consensus_9290#0 ---------------------------
consensus_9290#3 ---------------------------
consensus_9290#1 GTTCACGATCAGCCCGTACCACAGCGA 936
consensus_9290#2 ---------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||