These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9291#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1043 fasta sequence [GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATG-GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC-TGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG-CGAACGAGATACAGTACAATCTGCACGGCATCGTCG-GTACG-GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG-CGAAGCGCAACGTCGAGGGTCAGGACATGC-TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC-TGAAACTATCGCCGGGCAGTTCCGA-CGCAA-CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA-GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT-ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT-GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAACGGAA] [+] EMBL AL693594 [GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATGTGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCCGAACGAGATACAGTACAATCTGCACGGCATCGTCGCGTACGTGCCGATACGGTCGCGG CAAGATGACGG GAACAGCATCTTCACCATCGCCGAAGCGCAACGTCGAGGGTCAGGACATGCTTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTTGAAACTATCGCCGGGCAGTTCCGACCGCAA CGCTCAG CTGAAAACGCGCTCGGTTGAGGTCGGAGGCGATCATCTTTGCCG TTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCA CAACGGTGTGTAGAGTTTAGTATTGTTCATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCA CCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGGTGGCAAA ] [+] EMBL BX613571 [ TGCCGAGCGCTCCGCTGCAAGTGGC GCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTG GCACGACCGGGCCGGTGCAGCGTATG GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC TGGATAAGCGCTTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACT ] [+] EMBL BM647704 [ ccgAGCGTATG GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC TGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGGTCTG ] [+] EMBL BM578753 [ ccgGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAA ] [+] EMBL BM596033 [ ccgCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCG ] [-] EMBL BM579826 [ GCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAACGG ] [-] EMBL CNS09QLI [ gGGAGC GGAAACAACCGCCGGGCAGTTCTTT TTTAACCGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGG GCGATCATTTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTTTCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTTTCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATAT ] [+] EMBL BX627233 [ AGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATAC ] [-] EMBL AGA284410 [ TTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGACCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAAaaaaa] consensusID : consensus_9291#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 780 fasta sequence [GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCTGGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGCACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGTGAGCAGCTCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTTCGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC] [+] EMBL AGA285716 [GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCTGGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGCACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGTGAGCAGCTCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTTCG ] [+] EMBL BM653520 [ ccgCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC] consensusID : consensus_9291#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 686 fasta sequence [AGGCAGAATTGCCCGAGGTNTAT-CCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAG-CGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTG-TTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGA-GATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG] [+] EMBL AL696959 [AGGCAGAATTGCCCGAGGTNTAT CCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAG CGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTG TTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGA GATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG] [+] EMBL AL696185 [ ATCGCCAGAGGT TATCCCGAAAATCA CTGGCTG CAGCGGAC AGGGCAAGGGACTCGAAATTCAG GGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGANGATACAGTACAATCTGCACGGCATCGTCGGTACGGGCGATACGGTCGCGGCAAGATGA ] consensusID : consensus_9291#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence [TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCAGTCGTTGTTCGCAGAAGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTCATGCACAGATGAAAACGAGCCATGAGTT] [+] EMBL AL933333 [TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCAGTCGTTGTTCGCAGAAGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTCATGCACAGATGAAAACGAGCCATGAGTT] consensusID : consensus_9291#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 244 fasta sequence [CGCAGAAGAAGCAATATACATCTCCTGTGGTGCTGTGCCGCAGCGCTAAGATGACACACCTCCATGCACAGTATGAAAACGAGCCATGAGTCAGAGCAGTAACGAATAAGCGTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAAACACATCGCGTAAAGAGAACGGTAGTACCATACGTAACGATACAATCCACACATCGTCCGTCGGGACTACCTAAATAAAGTAAAAACGATGAAA] [+] EMBL BX612248 [CGCAGAAGAAGCAATATACATCTCCTGTGGTGCTGTGCCGCAGCGCTAAGATGACACACCTCCATGCACAGTATGAAAACGAGCCATGAGTCAGAGCAGTAACGAATAAGCGTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAAACACATCGCGTAAAGAGAACGGTAGTACCATACGTAACGATACAATCCACACATCGTCCGTCGGGACTACCTAAATAAAGTAAAAACGATGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9291#0 GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTC 60 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 GGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGA 120 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 TACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACC 180 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 TGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCA 240 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 ACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGG 300 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 AAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATA 360 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 CGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGG 420 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 ------------------------------------------------------------ consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 GTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC 480 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 -------------------------GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCT 35 consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 TGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGG 540 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------------------------------------------------------ consensus_9291#1 GGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGC 95 consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 TCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACG 600 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ------------TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGG 48 consensus_9291#1 ACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGT 155 consensus_9291#2 ------------------------------------------------------------ consensus_9291#0 CGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACC 660 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACG 108 consensus_9291#1 GAGCAGC-TCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCA 214 consensus_9291#2 AGGCAGAATTGCCCGAGGTNTA---TCCGAAAATCACCTGGCTGCCAGCGGACAAGGGCA 57 consensus_9291#0 GTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGT 720 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 AGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATG 168 consensus_9291#1 AGGGACTCGAAATTCAG-GGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATG 273 consensus_9291#2 AGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATG 117 consensus_9291#0 TGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGT 780 consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTAC 228 consensus_9291#1 ACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAAC 333 consensus_9291#2 ACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAAC 177 consensus_9291#0 TGTTCGCAGAAG-----AGGCAATATTCATCTTCTG-TGGTTCTGTT-CTGCAGCGCTAT 833 consensus_9291#4 ----CGCAGAAG-----AAGCAATATACATCTCCTG-TGGTGCTGTG-CCGCAGCGCTAA 49 consensus_9291#3 CAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAA-AC-TATCGCCGG 286 consensus_9291#1 AGCTTTCGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCG 393 consensus_9291#2 AGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCG 237 * * ** * *** * consensus_9291#0 TATTATATTTCTTCATGCACAGTATGAAAACGAGCCATG----AGTTTTAGTAGTAT--- 886 consensus_9291#4 GATGACACACCTCCATGCACAGTATGAAAACGAGCCATG----AGTCAGAGCAGTAA--- 102 consensus_9291#3 GCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCT 346 consensus_9291#1 GTTGATACGTCGCT-CGCCCTTGGCACGACCGGGCCGGT--GCAGCGTATGGAGCCGC-- 448 consensus_9291#2 GTTGATACGTCGCT-CGCCCTTGGCACGACCGGGCCGGT--GCAGCGTATGGAGCCGC-- 292 * ** * * ** ** * * consensus_9291#0 ------CGAATAAGC-GTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAA-ACAC 938 consensus_9291#4 ------CGAATAAGC-GTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAA-ACAC 154 consensus_9291#3 TTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAG-ACTCAACGCGCGCGAACCACCA 405 consensus_9291#1 ------TGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCT 502 consensus_9291#2 ------TGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCT 346 * * * * * * * * consensus_9291#0 ATCGCGTAAAGAGAACTGTAGTACC-ATATGTATCGATACAATTCACACATCGTCCGTCG 997 consensus_9291#4 ATCGCGTAAAGAGAACGGTAGTACC-ATACGTAACGATACAATCCACACATCGTCCGTCG 213 consensus_9291#3 ACCGTGTGTAGAGTTTAGTATTGTT-ATA--TTCCATTAGATTGTAACCGTTGGACAAAG 462 consensus_9291#1 GTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTC 562 consensus_9291#2 GTCTCGTGCACGGCAACGTACTGTT-GTGGAGGACGGACAGCTGGATAAGCGCGTCTTTC 405 * ** * * *** * * * * * consensus_9291#0 TGACTACCTAAATAAAGTAT-AATCGATGATATACTACTAAACGGAA------------- 1043 consensus_9291#4 GGACTACCTAAATAAAGTAA-AAACGATGAAA---------------------------- 244 consensus_9291#3 ATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGT 522 consensus_9291#1 TGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCG 622 consensus_9291#2 TGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCG 465 * *** * * consensus_9291#0 ------------------------------------------------------------ consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 GGCAAAATCGTTACGCGGACTCGAA-GCACACATTGTGGGCGGCAGTCGTTGTTCGCAGA 581 consensus_9291#1 TCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGA 682 consensus_9291#2 TCGGTACGGCCGATACGGTCGCGGC-AAGATGACGGCGAACAGCATCTTCACCATCGCGA 524 consensus_9291#0 ------------------------------------------------------------ consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 AGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTC 641 consensus_9291#1 AGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCT 742 consensus_9291#2 AGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCT 584 consensus_9291#0 ------------------------------------------------------------ consensus_9291#4 ------------------------------------------------------------ consensus_9291#3 ATGCACAGATGAAAACGAGCCATGAGTT-------------------------------- 669 consensus_9291#1 GGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC---------------------- 780 consensus_9291#2 GGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAA 644 consensus_9291#0 ------------------------------------------ consensus_9291#4 ------------------------------------------ consensus_9291#3 ------------------------------------------ consensus_9291#1 ------------------------------------------ consensus_9291#2 CGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG 686 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||