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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9299#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2420 fasta sequence
[CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTTTATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGACGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACAATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACTACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATGTAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCAGTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGCTCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGCAGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCACTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC-GAGCAGCTTATCCATCGGGACC-GTAACCAT-CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG-TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG-AAGCTCAACATG-ATCACCAA-CCGTGTCATCGAAGAGG-CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA-CTTCATACGCTTCCTGCCTACATCT-GGTCCGAGGACTA-CC-AGACGCGTGTCTT-CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG-TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGATCTGTTCCTGTACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGTGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAACCCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTGTTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA]
[+] EMBL BM596081 [CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTTTATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGACGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACG ]
[+] EMBL CNS09CRC [ CGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATCGATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGTACACGGACGATCTGGCCCGGTTTCGCAAAACGATCCAGATGCCCGTGCCGAGCAGTTACAACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCAAGTTCTTCGTCCCGAGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTTCTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTGGACATCTTCCGTTTGAGGCCGACGTGACGAA GCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGA ]
[+] EMBL BX621253 [ TTCCGTTTGAGGCCGACGTGACGAAGGCGCTTAAATACGGCGCCGAGAACCGCATTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACAATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACTACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATGTAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCAGTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGCTCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGCAGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCACTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACNGTATCATGATCATCGACGAGTGTCCTAGCGTANACACGGAGAATT ]
[+] EMBL BX617407 [ ACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGCTGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCCTAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACCCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTC ]
[+] EMBL BX611242 [ TTCGGATATACGTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCGGTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG AAGCTCAACATG ATCACCAA CCGTGTCATCGAAGAGG CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTTCGCAAGCAGAACTTCTTCATC ]
[+] EMBL BX618136 [ GAACGTCCCACTATCCCTACTCGTAGGAAAGCATGCAGTTTGCCGACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATC GAGCAGCTTATCCATCGGGACC GTAACCAT CCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGG AAGCTCAACATG ATCACCAA CCGTGTCATCGAAGAGG CGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTATGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCC ]
[+] EMBL AL932189 [ aACCCGGAGA TTCACAGATCCTGCTGGAAAAGCACAAATCCAGCATCAGAGCAGCTTATCCATCGGGACCAGTAACCATACCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGATACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTANATGATGATGTTGCGGGACAATACCTGGACATTGTCAGGTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGTAAGCTCAACATGTATTACCAAGCCGTGTCATCGAAGAGGACGGAAGCATGGAACAATAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGA CTTCATACGCTTCCTG CTACATCTGGGTCCGANGACTA CCNAGACGCGTGTCTTACAGGCAGCACTTCAAGGCG TCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGATTTGTGTGGAACTTTGCTGACTTCA ]
[+] EMBL AGA285937 [ AAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAG TACACGAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGG ]
[-] EMBL AGA284578 [ tcCGGAGTATGGTGCCGATACGCAGGAAGGACCTTCATACGCTTCCTGCCTACATCT GGTCCGAGGACTACCC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAA ]
[+] EMBL BX618501 [ ATCT GGTCCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTC ]
[-] EMBL CNS09CRD [ CCGAGGACTA CC AGACGCGTGTCTT CAGCCAGCACTTCAAGGCGTTCGA ATGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGT GAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTC GGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTG TGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGATCTGTTCCTGTACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGTGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAACCCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTGTTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA]
[+] EMBL BX618864 [ CTTCAAGGCGTTCGAAGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAG TTTGTGTGGAACTTTGCCGACTTCAAAACGGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAGAGTCACCTGCCGGACGAACTGTTCCTGGACACGGCCCCCGAGAACAGCCAGCTATCACATGAGAAGACGGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGTGAGTGGGGAGCTGCCATTAACGCCAAACAACCCACTTACA ]
consensusID : consensus_9299#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 799 fasta sequence
[CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACCATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGACGGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAAGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATCCACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTGTGTAGTGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG]
[+] EMBL BX468268 [CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACCATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGCGTTCGATGCGCTGCGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGACGGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCAACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAAAGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATCCACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTGTGTAGTGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG]
consensusID : consensus_9299#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 675 fasta sequence
[CCGCGCGGGTTCGCGGGTCGGGTTTGGTTGGATGAGATGTCCACAGCGCCTTAATTTGATTGTCGTAATCGGAAGTGTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCACGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCAACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATGTCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTGTGTTCCGGTCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGTGATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAGAAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCA]
[+] EMBL BM656726 [CCGCGCGGGTTCGCGGGTCGGGTTTGGTTGGATGAGATGTCCACAGCGCCTTAATTTGATTGTCGTAATCGGAAGTGTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCACGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCAACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATGTCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTGTGTTCCGGTCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGTGATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAGAAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTGGTGACGTTTGCGGTAATGGGCATGATCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCA]
consensusID : consensus_9299#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence
[CCCCGAGGTTTAAATCAGCATCGAGCAGCTTATCATCGGGACGTNACATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGGCGTTCGATGCGCTGCGCAAGCAGAA]
[+] EMBL AL930893 [CCCCGAGGTTTAAATCAGCATCGAGCAGCTTATCATCGGGACGTNACATCCGAGCGTGGTGATGTGGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCGCGAGTCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGACGCGTCCCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACATTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTACCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGATGTCGGAGTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCTGGTCCGAGGACTACCAGACGCGTGTCTTCAGCCAGCACTTCAAGGGCGTTCGATGCGCTGCGCAAGCAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CCGCCACTGGTGGTGGATGTTTCTCGTTCAGCTAGCTCGCTAGTTATTACTCACACGTTT 60
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TATGAGTCGTTAGTGCGTTTTTTTGTTTCTTAATGTTATCAAACAATACCAAACCTGTGA 120
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CGACCGTATCTTCATCAGTATCGTTAAACAGCAACAGCATCCGATGGCGACTTGTGGATC 180
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GATTGCGCGCCAATCTGTTGGCCCTTCTTAGAGTGGTGACGTTTGCGGTAATGGGCATGA 240
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TCGGTTGCATGGTGAACGTCGTGTTTGGAGCAATGTACACCTCAGGCAATGAGTCCTCCA 300
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CCGAGGGCCTTCTCTATCCGATTGAATCGGAAACTCGCGAAATGAAGAAGCTGGACGGTA 360
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TGTGGAACTTTGTGCGCTCGGAAAGCAACAACCCATCGCAAGGTATCCGGGAGAAGTGGT 420
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ACACGGACGATCTGGCCCGGTTCCGCAAGACGATCCAGATGCCCGTGCCGAGCAGTTACA 480
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ACGACGTCACGGAGGATGCGGGCCTGCGCGATCACGTCGGCACGGTGTGGTACGATCGCA 540
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 AGTTTTTCGTCCCGCGGGCATGGTCCAAGGGTGATGATCGCGTTTTCCTGCGGTTCGGTT 600
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CTGTGCACTACTCTACAATTGTGTGGATCAATGGAGTTCAGGTGATGACCCACGAGTTTG 660
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GACATCTTCCGTTTGAGGCCGACGTGACGAACGCGCTTAAATACGGCGCCGAGAACCGCA 720
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TTACCGTGCTGTGTGACAATGTGCTGCTTCAGGTGACGGTTCCACAGGGCAAGGTCGACA 780
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ATCAGGCGATTGACAACGGTGTGGAATTGGTCCAGTCGTACACGTTCGACTTCTTCAACT 840
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ACGCAGGTATCCATCGGTCGGTTGTGCTGTACACGGTGCCGCGGGTCTACATCCGCGATG 900
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TAGTCATCCACACCAGCTACGAAGGAGATGAAGGCCGGGTGGACTACCAGGTCACGACCA 960
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GTACGAACGAAACCGACCATCTGCTGCTGAAGGTGAAGCTGTACGATCGCAACGGCACGC 1020
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TCGTCAGCAAGGACGAATCGGAGGCGAAACTGCAGGGCACGGTAGTTGTGCCGCAGGTGC 1080
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 AGCTCTGGTGGCCATATCTGATGCATCCCGAGCCGGGCTATCTCTACACGATGGAGATCA 1140
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CTCTCGGGAAAGCACAATCAAACGATGCGCCTACCGATGAGAAGGAAGAGGATACGGTGC 1200
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TGGATGTGTACCGGTTCAAGGTTGGCATCCGTACGCTCGAGTGGAACAACAGTTCGTTCC 1260
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TAATCAACGGGAAGCCTATTTACTTCAGGGGATTTGGACGCCACGAAGATTCGGATATAC 1320
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GTGGCAAGGGATTAGATTTAGCGCTTCTAACCAAAGATTTCAATCTGCTCAAATGGGTCG 1380
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GTGCCAACGCGTACCGAACGTCCCACTATCCCTACTCGGAGGAAAGCATGCAGTTTGCCG 1440
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ACGAGCACGGTATCATGATCATCGACGAGTGTCCTAGCGTAGACACGGAGAATTTTTCAC 1500
consensus_9299#2 ------------------------------------------CCGCGCGGGTTCGCGGGT 18
consensus_9299#1 -----------CAGATCCGCACGANGGACATCGAGCAGCTTATCCATCGCGGACGTAACC 49
consensus_9299#3 ---------CCCCGAGGTTTA-AATCAGCATCGAGCAGCTTATC-ATCG-GGACGTNAC- 47
consensus_9299#0 AGATCCTGCTGGAAAAGCACAAATCCAGCATCGAGCAGCTTATCCATCGGGACCGTAACC 1560
consensus_9299#2 CGGGTTTGGTTGGATGAGATGTCCACAGCGCCT--TAATTTGATTGTCGTAATCGGAAGT 76
* * * ** *** ** *
consensus_9299#1 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCG 106
consensus_9299#3 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGTACGGGCAAGATGGTCG 104
consensus_9299#0 ATCCGAGCGTG-GTGATGT--GGTCGATCGCCAATGAACCTCGCACGGGCAAGATGGTCG 1617
consensus_9299#2 GTTGGAACGTGTGTGGTGTAGGGTGTACTAGTTCAGGAGCAGCTACAGCATTGGAAAGCA 136
* ** **** *** *** *** * * * * ** * * *
consensus_9299#1 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGA--CGCG-C 162
consensus_9299#3 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACCAAAAAGCTGGACCCGA--CGCGTC 161
consensus_9299#0 CGAG-TCCTTACTTCGAGGCCGTGGCGCAGTACACGAAAAAGCTGGACCCGA--CGCGTC 1674
consensus_9299#2 CGTGATTCAAAGTACACAGCAGCAAGTCAGTGCTCGGAGTGCATCGGATTGAACCACGCA 196
** * * * * * * ** * **** * * * * * ** * **
consensus_9299#1 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 222
consensus_9299#3 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 221
consensus_9299#0 CCATAACGGCCGCCATTGCCGTGAACGTAAATGATGATGTTGCGGCACAATACCTGGACA 1734
consensus_9299#2 ACAGGTTTGACGAAGAGGGTACGAAAGCATGCGAAGACCTATGTTTACCGACCGCCAATG 256
** * ** * *** * * ** ** * ** * *
consensus_9299#1 TTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTA 282
consensus_9299#3 TTGTCAGCTTCAACCGGTACAACGCGTGGTACGCCAACTCCGGGAAGCTCAACATGATTA 281
consensus_9299#0 TTGTCAGCTTCAACCGGTACAACGCGTGGTATGCCAACTCCGGGAAGCTCAACATGATCA 1794
consensus_9299#2 TCGGTAACTTTTGCTGGCCAAGCGAACCCAACTGTGATTGAAGAGTGTTTG-TGTTCCGG 315
* * * *** * ** * ** * * * * * * *
consensus_9299#1 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 342
consensus_9299#3 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 341
consensus_9299#0 CCAACCGTGTCATCGAAGAGGCGGAAGCATGGAACAAAAAACACAATAAGCCGGTCTTGA 1854
consensus_9299#2 TCTACCATTGGCTGTGGCGGTTAGAAGCACCAGCACGCAATAATGGTGGCGCCATCTAGT 375
* *** * * * ****** ** * * * *** *
consensus_9299#1 TGTCGGA---GTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 399
consensus_9299#3 TGTCGGA---GTACGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 398
consensus_9299#0 TGTCGGA---GTATGGTGCCGATACGCAGGAAGGACTTCATACGCTTCCTGCCTACATCT 1911
consensus_9299#2 GATGGGTCCCGCAAGCTACTGCTGCTCAGGGATGCAGACCGACGCAAGCGGCGGATAGAG 435
* ** * * * * * * * * **** * * * **** * ** * *
consensus_9299#1 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGG-CGTTCGATGCG 455
consensus_9299#3 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGGGCGTTCGATGCG 455
consensus_9299#0 GGTCCGAGGACTACCAGACGCGTGTCTT-CAGCCAGC--ACTTCAAGG-CGTTCGATGCG 1967
consensus_9299#2 AAGTTGCGCCGCATCCAGCACGATCATTGCATGCGACTGATTGTGATAGCGTTAATAGTG 495
* * * * * ** ** ** * * * * * **** * *
consensus_9299#1 CTG-CGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCTGACTTCAAGAC 514
consensus_9299#3 CTG-CGCAAGCAGAA--------------------------------------------- 469
consensus_9299#0 CTG-CGCAAGCAGAACTTCTTCATCGGCGAGTTTGTGTGGAACTTTGCCGACTTCAAAAC 2026
consensus_9299#2 GTGACGTTTGCGGTAATGGG-CATGATCGGTTGCATGGTGAAC---GTCGTGTTTGGAGC 551
** ** ** * *
consensus_9299#1 GGCCCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTCACCCGCAACCGGCA 574
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 GGCGCAAACGTACACACGTGTCGGGGGCAACAAGAAGGGCATTTTTACTCGCAACCGGCA 2086
consensus_9299#2 AATGTACACCT---CAGGCAATGAGTCCTCCACCGAGGGCCTTCTCTATCCGATTGAATC 608
consensus_9299#1 ACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAA 634
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 ACCGAAGGCGGCCGCGTATCTGCTGCGCCAGCGGTACCACGCGCTGGGCGAGCTGGGCAA 2146
consensus_9299#2 GGAAACTCGCGAAATGAAGAAGCTGGACGGTATGTGGAACTTTGTGCGCTCGGAAAGCAA 668
consensus_9299#1 AGAGTCACCTGCCGGGACGATCTGTTCCTGTACACGGACCCCCGAGAAACAGCCAGTATC 694
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 -GAGTCACCTGCCGG-ACGATCTGTTCCTGTACACGG--CCCCCGAGAACAGCCAGCTAT 2202
consensus_9299#2 CAACCCA----------------------------------------------------- 675
consensus_9299#1 CACAGGAGAAGAACGGGAACTGTAGAGAAAGAGAAATTAGCGAATTGAGTNAATTAAGTG 754
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CACATGAGAAGAC--GGAACTGTAGAGAAAGAGAGAATGAGTGAGCGAGTGAGT-GAGTG 2259
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 TGTAG-TGCCATTTACGGCAAAAACCCAGTTTANCAATTGGTTAAG-------------- 799
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 TGTAGCTGCCATTAACGCCAAACAACCCACTTACAATTGGTTTAGAGTTATGCACGAAAC 2319
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 ------------------------------------------------------------
consensus_9299#3 ------------------------------------------------------------
consensus_9299#0 CCTGAAGTATTGGACAATCGTTTTGCGTTGTTCCGCTATTATTTCTCTAGCATCTAGCTG 2379
consensus_9299#2 ------------------------------------------------------------
consensus_9299#1 -----------------------------------------
consensus_9299#3 -----------------------------------------
consensus_9299#0 TTAAGTGTTACTACGGAACTATTTCTGGACTGATAATGCAA 2420
consensus_9299#2 -----------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||