These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9303#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1327 fasta sequence [TTAAATAACATGTAAACAAAACGAAAAACCTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAAGATTTTCTGCAACTGTACAACAAAATCACCGACATGTGTTTTAACTCCTGCGTAGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCCGAAGCCCAGCAGCAGCAGCAACAAGAGCAACA---AGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACGCCCGAAGTGGCCACCGCATCAAACTCTACAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA--TTTTTATATCG-TTTTTTAGTTACACTT---AAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG-GGCCG-AA-G-TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG-TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATCATACATGCGCTGAAAGAGAACGACCACTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC-CTAATGCGCTCAGACGTTGTGTTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTCTCTTTCGCTTGCTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGGCAAGCTTTACCACCAAGAGCATGACTTCATAACAATTAACGACCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTGAACATCCTCAGGAAAACCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACGTTCACAAGGTAGACATTATTTTGAGAAAATTGATATCAAAAAAGATCACCGAAGCGAAAGATTCGATGACGGCAACGAAGCAAAATTTGCAATCGTACGCCAAAGTGCTGCAGGAAAGGAAAAAGTACGTACTGGAGCAG] [+] EMBL CNS09LOO [TTAAATAACATGTAAACAAAACGAAAAACCTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAAGATTTTCTGCAACTATACAACAAAATCACCGACATGTGTTTTAACTCCTGCGTAGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCCGAAGCCCAGCAGCAGCAGCAACAAGAGCAACA AGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACGCCCGAAGTGGCCACTGCATCAAACTCTACAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATACCG TTTTTTAGTTACACTT AAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTATTGTCAGCAGCTCGTTGCGTTACCGCCGCCC AA G T ] [+] EMBL CNS09GUU [ AATAACATGTAAACAAAACGAAAAACCTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAAGATTTTCTGCAACTATACAACAAAATCACCGACATGTGTTTTAACTCCTGCGTAGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCCGAAGCCCAGCAGCAGCAGCAACAAGAGCAACA AGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACGCCCGAAGTGGCCACTGCATCAAACTCTACAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATACCG TTTTTTAGTTACACTT AAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTATTGTCAGCAGCTCGTTGCGTTACCG GGCCG AA G TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATCATACATGCGCTAAAAGAGAACGACCACTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGCGCTCAGACGTTGTGTCCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCCACACGTCTCTTTCGCTTGCTCTGGAACGGAATCGGGAAAGAGCCCAAAAAATCGGTGAAGATGTAATCA ] [+] EMBL CNS09ONX [ GTAAACAAAACGAAAAACCTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAGGATTTTCTGCAACTGTACAACAAAATCACCGACATGTGTTTTAACTCCTGCGTAGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTCAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCAGAAGCACAGCAGCAGCAGCAACAGCAAGACCA A CA AGCAGTAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTGAGTGATTTA TTTTTATATCG TTTTTTAGTTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG GGCCGAAA A TTTGAAGTTGTTCAGGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGATGCTATTAACTTACATTGAAATGATCATACATGCGCTGAAAGAGAACGACCCCTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGCGCTCAGACGTTGTGGTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCTAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTCTCTTTCGCTTGCTCTGGAACGGAATCGGGAAAGA ] [+] EMBL BM633709 [ ccgAAAACGAAAAACCTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTCAAATTTACCAACGTAAATCAGCGATTGCTGAAGGTGTACGTTGGCGTGCAGTCGGACATCAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCAGAAGCCCAGCAGCAGCAGCAACAGCAAGACCA A CA AGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTGAGTGATTTA TTTTTATATCG TTTTTTAGTTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG GGCCG AA GATTTGAAGTAGTTCACGTATGTTATGATTCGTACATCAAGATTGATTGTCATTATGATACG TTTCGGGATGTAGCTGGTTTGTACAAAGCGAGCCGTCAGAAGCTATTAA ] [+] EMBL BM592843 [ ccgGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAAGATTTTCTGCAACTGTACAACAAAATCACCGACATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGTGCTGATAATTGTGTGCTCAAGTTTACTAACGTAAATCAGCGATTGCTGAAGGTGTACGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCCGAAGCC CAGCAGCAGCAACAAGAGCAACA AGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACGCCCGAAGTGGCCACCGCATCAAACTCCACAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATATCGTTTTTTTAGTTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAAGCACCTACTGTCAGCAGCTCCTTGCGTTACCG GGCCG AAGG TTTGAAGTAGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACGTTTTCGGGATGTGTTCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTg ] [+] EMBL BM600512 [ ccgACGAATTACGGAATATCAAGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTCCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGACTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAGAAGCC CAGCAGCAGCAACAAGAGCAACA AGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACGCCCGAAGTGGCCACTGCATCAAACTCTACAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTATTTTTTTATATCG TTTTTTAGTTACACTTACAAAATGGCTAGAATATGTTTGAACGTTCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTTCCG GGCCG AA GTTTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATAC ] [-] EMBL CNS096CA [ gaacagCAGCGGCGGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATATCG TTTTTTAGTTATACTT AAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG GGCCG AAGG TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATCATACATGCGCTGAAAGAGAACGACCACTCCCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGTGCTCAGACGTTGTGTTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAGACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTTTTTTTCGCTTACTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGACAAGCTTTACCACCAAGAGC ] [+] EMBL BX616306 [ cagCAGCAGCAGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATATCG TTTTTTAGTTATACTT AAATGGCTAGA ATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG GGCCG AAGG TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAG ] [-] EMBL CNS09GUV [ CAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTA TTTTTATACCG TTTTTTAG TAAACTT AAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTATTGTCAGCAGCTCGTTGCGTTACCG GGCCG AAGG TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTTACTTACATTGAAATGATCATACATGCGCTAAAAGAGAACGACCACTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGCGCTCAGACGTTGTGTCCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCCACACGTCTCTTTCGCTTGCTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGGCAAGCTTTACCACCAAGAGCATGACTTCATAACAATTAACGACCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTGAACATCCTCAGGAAAACCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACGTTCACAAGGTAGACATTATTTTGAGAAAATTGATATCAAAAAAGATCACCGAAGCGAAAGATTCGATGACGGCAACGAAGCAAAATTTGCAATCGTACGCCAAAGTGCTGCAGGAAAGGAAAAAGTACGTACTGGAGCAG] [-] EMBL CNS09ONY [ TATTTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCG GGCCGAAA A TTTGAAGTTGTTCAGGTATGTTATGATTCGTACATCAAGATTGATCGTCATTTTGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGATGCTATTTACTTACATTGAAATGATCATACATGCGCTGAAAGAGAACGACCCCTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGCGCTCAGACGTTGTGGTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCTAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTCTCTTTCGCTTGCTCTGGAACGGAATCGGGAAAGAGCCCTTCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGGCAAGCTTTACCACCAAGAGCATGACTTCATAACAATTAACGACCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTGAACATCCTCAGGAAAACCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACGTTCACAAGGTAGACATTATTTTGAGAAAATTGATATCAAAAAAGATCACCGAAGCGAAAGATTCGATGACGGCAACGAAGCAAAATTTGCAATCGTACGCCAAAGTGCTGCAGGAAAGGAAAAAGTACGTACTGGAGCAG] [+] EMBL BX615027 [ ACTGTCAGCAGCTCGTTGCGTTACCG GGCCG AAGG TTTGAAGTTGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACG TTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATCATACATGCGCTGAAAGAGAACGACCACTCCCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGC CTAATGTGCTCAGACGTTGTGTTCTTAATCGATGATAATAACT TACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAGACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTCTCTTTCGCTTACTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGACAAGCTTTACCACCAAGAGCATGACTTCATAACAATTAACGGCCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTGAACATCCTCAGGAAAGCCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACGTTCACAAGGTAGACATTATTTTGAGAAAATTGGTATCAAAAAAGATCACCGAAGCGAAACATTCGATGGCGGCAACGAAGCAAAACTTGCAATCATACGCCAAAGTGCTGCA ] [-] EMBL CNS09LOP [ TATTAACTTACATTGAAATGATCATACATGCGCTAAAAGAGAACGACCACTCTCAACTAGATGAAGCGTTGTTTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGCGCTAATGCGCTCAGACGTTGTGTTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAAAGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCCACACGTTTTTTTCGCTTGCTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTATGTGGGCGCGTTTAGAAAAACCATGCGGCAAGCTTTACCACCAAGAGCATGACTTCATAACAATTAACGACCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTGAACATCCTCAGGAAAACCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACGTTCACAAGGTAGACATTATTTTGAGAAAATTGATATCAAAAAAGATCACCGAAGCGAAAGATTCGATGACGGCAACGAAGCAAAATTTGCAATCGTACGCCAAAGTGCTGCAGGAAAGGAAAAAGTACGTACTGGAGCAG] consensusID : consensus_9303#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 858 fasta sequence [TCATGCAGATCCCCNCGGTTATGGTAGCAGAACTTCCGTAGCATAATAGAGCCATTCCACCACCGCCTGGCCAATGCTTAGTGATTTATTANTTATATCGTTTTTTAGTTATACTTAAATGGCTAGAATATGTNTTGAACGTGCTTGTCNGGCATCCCGGGGTCAGTGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCTGGGCCGAAGGTTTGNAGTTGTTCACGTATGTTATGATTCGTACATACAAGATTGCATCGTCATATATGATACGTTTCGGGATGTGGCCGGTTTGTAACAAGAAAAGGCCTGTCAGAAGCTATACCTATACATTTGNACNTGNTCATCACCATGCGCTGCAACAGAGAACTGAACACTCCCAACTANGCATTGAACGCGTTGTTTNCGTTGGCCGTACAAGACACTTTAACAACCATGACATTTGTNGGCCATTTANCCTATCAANGCCCTANANTGTTGCTACAGAACGTNCNCGTAGTAACGTCNACATACGACTTGATAAATAAACTACTAACAGAAGCATGACGCGTAGCAATGGACAAAACAGATTATGCCCGTGAGACTTTCCATACGGCNTCATTTCTCNGAACTACCCTAATAGNCGACCAGCGGTACTCTATNACACNGGCTTANACTACCTAGGGCAAAGCGGGCAGACGTACGGGGAAAAGGAAGGCCACAAATANCNAAAATCCGGAGTGGANAAGAATTGGTACACATCCCACAATACGGTAAATTGTAGGGGACGGCGGTATAACGGACAACCAAAGCCCAANTGACGAACACACGACATANAACACACAGACAAAGAAGGCATTGGACTATCAATCGAAG] [+] EMBL AL692325 [TCATGCAGATCCCCNCGGTTATGGTAGCAGAACTTCCGTAGCATAATAGAGCCATTCCACCACCGCCTGGCCAATGCTTAGTGATTTATTANTTATATCGTTTTTTAGTTATACTTAAATGGCTAGAATATGTNTTGAACGTGCTTGTCNGGCATCCCGGGGTCAGTGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCTGGGCCGAAGGTTTGNAGTTGTTCACGTATGTTATGATTCGTACATACAAGATTGCATCGTCATATATGATACGTTTCGGGATGTGGCCGGTTTGTAACAAGAAAAGGCCTGTCAGAAGCTATACCTATACATTTGNACNTGNTCATCACCATGCGCTGCAACAGAGAACTGAACACTCCCAACTANGCATTGAACGCGTTGTTTNCGTTGGCCGTACAAGACACTTTAACAACCATGACATTTGTNGGCCATTTANCCTATCAANGCCCTANANTGTTGCTACAGAACGTNCNCGTAGTAACGTCNACATACGACTTGATAAATAAACTACTAACAGAAGCATGACGCGTAGCAATGGACAAAACAGATTATGCCCGTGAGACTTTCCATACGGCNTCATTTCTCNGAACTACCCTAATAGNCGACCAGCGGTACTCTATNACACNGGCTTANACTACCTAGGGCAAAGCGGGCAGACGTACGGGGAAAAGGAAGGCCACAAATANCNAAAATCCGGAGTGGANAAGAATTGGTACACATCCCACAATACGGTAAATTGTAGGGGACGGCGGTATAACGGACAACCAAAGCCCAANTGACGAACACACGACATANAACACACAGACAAAGAAGGCATTGGACTATCAATCGAAG] consensusID : consensus_9303#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 782 fasta sequence [GCCAGAATCGGCACGTAGGACAAACGAAAAACTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAGAAGCACAGCAGCAGCAGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCTGGGTGATTTATTTTTATATCGTTTTTTTAGCTACACTTACAAAATGGCTAGAATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTTACTGTCAGCAGCTCGGTTGCGTTTACCGGGGCCGAAGATTTGAAAGTAGTTCACGTATGTTATTGATTCGGTACATCCAAGAATTGAATTCGTCATTATGATACGTTTCGGGATGTGGGCCGGTTTGTACAAGACAAGCCGGTCAGAAGCTATTACTTACATGGNAATGATCATACATGCGCTGAAGANACGAACACTNTCAAATGGGATAAGCGTTNTTCGGTGGG] [+] EMBL BX468398 [GCCAGAATCGGCACGTAGGACAAACGAAAAACTCTGTACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAGAAGCACAGCAGCAGCAGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCTGGGTGATTTATTTTTATATCGTTTTTTTAGCTACACTTACAAAATGGCTAGAATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTTACTGTCAGCAGCTCGGTTGCGTTTACCGGGGCCGAAGATTTGAAAGTAGTTCACGTATGTTATTGATTCGGTACATCCAAGAATTGAATTCGTCATTATGATACGTTTCGGGATGTGGGCCGGTTTGTACAAGACAAGCCGGTCAGAAGCTATTACTTACATGGNAATGATCATACATGCGCTGAAGANACGAACACTNTCAAATGGGATAAGCGTTNTTCGGTGGG] consensusID : consensus_9303#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence [CCGCCCACGCGTCCGGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAGAAGCACAGCAGCAGCAGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCTGGGTGATTTATTTTTATATCGTTTTTTAGCTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCGGGCCGAAGATTTGAAGTAGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACGTTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATC] [+] EMBL BM635518 [CCGCCCACGCGTCCGGGATTTTCTGCAACTGTACAACAAAATCACCGATATGTGTTTTAACTCCTGCGTGGACAATCTGTTCGGCCGGGATCTGACGCGTGAGGAAGTATCGTGCGCTGATAATTGTGTGCTAAAGTTTACCAACGTAAATCAGCGATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTAACCAGCGCCGGTTGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAGAAGCACAGCAGCAGCAGCAACAGCAAGACCAACAAGCAGCAGCAGCAGCAGCAGCAGTTCCAGCAACACCTGAAGTGGCCACCGCATCAAACTCTGCAGAACCTTCCGTAGCATAATAGAGCCATGCCACCACCGCCTGGCCTGGGTGATTTATTTTTATATCGTTTTTTAGCTACACTTACAAAATGGCTAGAATATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAGGGAAAACCACCTACTGTCAGCAGCTCGTTGCGTTACCGGGCCGAAGATTTGAAGTAGTTCACGTATGTTATGATTCGTACATCAAGATTGATCGTCATTATGATACGTTTCGGGATGTGGCCGGTTTGTACAAGACAAGCCGTCAGAAGCTATTAACTTACATTGAAATGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9303#2 -----------------------GCCAGAATCGGCACGTAGGACAAACGAAAAAC-TCTG 36 consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 --------------------------TTAAATAACATGTAAACAAAACGAAAAACCTCTG 34 consensus_9303#1 TCATGCAGATCCCCNCGGTTATGGTAGCAGAACTTCCGTAGCATAATAGAGCCATTCCAC 60 consensus_9303#2 TACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAGGATTTTCTGCAAC 96 consensus_9303#3 ----------------------------CCGCCCACG---CGTCCGGGATTTTCTGCAAC 29 consensus_9303#0 TACATAGCAGCGCCGCAAGGATGGATTACGAATTACGGAATATCAAAGATTTTCTGCAAC 94 consensus_9303#1 CACCGCCTGGCCAATGCTTAGTGATTTATTANTTATATCGTTTTTTAGTTATACTTAAAT 120 * * * * * ** ** consensus_9303#2 TGTACAACAAAATCACCGATATG--TGTTTTAACTCCTGCG-----TGGACAATCTGTTC 149 consensus_9303#3 TGTACAACAAAATCACCGATATG--TGTTTTAACTCCTGCG-----TGGACAATCTGTTC 82 consensus_9303#0 TGTACAACAAAATCACCGACATG--TGTTTTAACTCCTGCG-----TAGACAATCTGTTC 147 consensus_9303#1 GGCTAGAATATGTNTTGAACGTGCTTGTCNGGCATCCCGGGGTCAGTGAAAACCACCTAC 180 * * * * * ** *** *** * * * * * * * consensus_9303#2 GGCCGGGATCT-GACGCGTGA---GGAAGTATCGTGCGCTGATAATT--GTGTGCTAAAG 203 consensus_9303#3 GGCCGGGATCT-GACGCGTGA---GGAAGTATCGTGCGCTGATAATT--GTGTGCTAAAG 136 consensus_9303#0 GGCCGGGATCT-GACGCGTGA---GGAAGTATCGTGCGCTGATAATT--GTGTGCTAAAG 201 consensus_9303#1 TGTCAGCAGCTCGTTGCGTTACCTGGGCCGAAGGTTTGNAGTTGTTCACGTATGTTATGA 240 * * * * ** * **** * ** * ** * * * * ** ** ** consensus_9303#2 TTTACCAACGTAAATCAGCG--ATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTA 261 consensus_9303#3 TTTACCAACGTAAATCAGCG--ATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTA 194 consensus_9303#0 TTTACCAACGTAAATCAGCG--ATTGCTGAAGGTGTATGTTGGCGTGCAGTCGGACATTA 259 consensus_9303#1 TTCGTACATACAAGATTGCATCGTCATATATGATACGTTTCGGGATGTGGCCGGTTTGTA 300 ** * ** ** * * * * * * ** ** * *** ** consensus_9303#2 ACCAGCGCCGGT-TGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAG--AAGCAC 318 consensus_9303#3 ACCAGCGCCGGT-TGGCTGAGGTGGAGACTCAGCAGGCAAAAATGGTAGCAG--AAGCAC 251 consensus_9303#0 ACCAGCGCCGGT-TGGCTGAGGTGGAGACACAGCAGGCAAAAATGGTAGCCG--AAGCCC 316 consensus_9303#1 ACAAGAAAAGGCCTGTCAGAAGCTATACCTATACATTTGNACNTGNTCATCACCATGCGC 360 ** ** ** ** * ** * * ** * ** * * ** * consensus_9303#2 AGCAGCAGCAGCAACAGCAAGACCAA-CA--AGCAGCAGCAGCAGCAGCAGCAGTTCCAG 375 consensus_9303#3 AGCAGCAGCAGCAACAGCAAGACCAA-CA--AGCAGCAGCAGCAGCAGCAGCAGTTCCAG 308 consensus_9303#0 AGCAGCAGCAGCAACAAGAGCAACAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTTCCAG 376 consensus_9303#1 TGCAACAGAGAACTGAACACTCCCAACTANGCATTGAACGCGTTGTTTNCGTTGGCCGTA 420 *** *** * * *** * * * * * * * * consensus_9303#2 CAACAC-CTGAAGTGGCCACCGCATCAAACT-CTGCAGAACCTTCCGTAGC---ATAATA 430 consensus_9303#3 CAACAC-CTGAAGTGGCCACCGCATCAAACT-CTGCAGAACCTTCCGTAGC---ATAATA 363 consensus_9303#0 CAACGC-CCGAAGTGGCCACCGCATCAAACT-CTACAGAACCTTCCGTAGC---ATAATA 431 consensus_9303#1 CAAGACACTTTAACAACCATGACATTTGTNGGCCATTTANCCTATCAANGCCCTANANTG 480 *** * * * *** *** * * *** * ** * * * consensus_9303#2 GAGCCATGCCACCACCGCCTGGCC-----TGGGTGATTTATTTTTATATCGTTTTTTTAG 485 consensus_9303#3 GAGCCATGCCACCACCGCCTGGCC-----TGGGTGATTTATTTTTATATCGTTTTTT-AG 417 consensus_9303#0 GAGCCATGCCACCACCGCCTGGCCAATGCTTAGTGATTTATTTTTATATCGTTTTTT-AG 490 consensus_9303#1 TTGCTACAGAACGTNCNCGTAGTAACGTCNACAT-ACGACTTGATAAATAAACTACTAAC 539 ** * ** * * * * * * ** ** ** * * * consensus_9303#2 CTACACTTACAAAATGGCTA-GAA--TGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAG 542 consensus_9303#3 CTACACTTACAAAATGGCTA-GAATATGTTTGAACGTGCTCGTCGGCATCCCGGGGTCAG 476 consensus_9303#0 TTACACTT---AAATGGCTA-GAATATGTTTGAACGTGCTTGTCGGCATCCCGGGGTCAG 546 consensus_9303#1 AGAAGCATGACGCGTAGCAATGGACAAAACAGATTATGCCCGTGAGACTTTCCATACGGC 599 * * * * ** * * * ** *** ** * * * consensus_9303#2 GGAAAACCACCTTACTGTC--AGCAGCTCGGTTGCGTTTACCGGGGCCGAAGATTTGAAA 600 consensus_9303#3 GGAAAACCACCT-ACTGTC--AGCAGCTCG-TTGCGTT-ACCGGG-CCGAAGATTTGAA- 529 consensus_9303#0 GGAAAACCACCT-ACTGTC--AGCAGCTCG-TTGCGTT-ACCGGG-CCGAAG-TTTGAA- 598 consensus_9303#1 NTCATTTCTCNGAACTACCCTAATAGNCGACCAGCGGTACTCTATNACACNGGCTTANA- 658 * * * *** * * ** *** * * * * ** * consensus_9303#2 GTAGTTCACGTATGTTATTGATTCGGTACATCCAAGAATTGAATTCGTCATTATGATACG 660 consensus_9303#3 GTAGTTCACGTATGTTAT-GATTCG-TACATC--AAGATTGA--TCGTCATTATGATACG 583 consensus_9303#0 GTTGTTCACGTATGTTAT-GATTCG-TACATC--AAGATTGA--TCGTCATTATGATACG 652 consensus_9303#1 CTACCTAGGGCAAAGCGGGCAGACG-TACGGG-GAAAAGGAAGGCCACAAATANCNAAAA 716 * * * * * ** *** * * * * * ** * consensus_9303#2 TTTCG---GGATGTGGGCCGGTTTGTACAAGACAAGCCGGTCAGAAGCTATTA-CTTACA 716 consensus_9303#3 TTTCG---GGATGTGG-CCGGTTTGTACAAGACAAGCCG-TCAGAAGCTATTAACTTACA 638 consensus_9303#0 TTTCG---GGATGTGG-CCGGTTTGTACAAGACAAGCCG-TCAGAAGCTATTAACTTACA 707 consensus_9303#1 TCCGGAGTGGANAAGAATTGGTACACATCCCACAATACGGTAAATTGTAGGGGACGGCGG 776 * * *** * *** * **** ** * * * * consensus_9303#2 TGGNAATGATCATACATGCGCTGAAGAN--ACGAACACTNTCAAATGGGATAAGCGTTNT 774 consensus_9303#3 TTGAAATGATC------------------------------------------------- 649 consensus_9303#0 TTGAAATGATCATACATGCGCTGAAAGAGAACGACCACTCTCAACTAGATGAAGCGTTGT 767 consensus_9303#1 TATAACGGACAACCAAAGCCCAANTGACGAACACACGACATANAACACACAGACAAAGAA 836 * * ** consensus_9303#2 TCGGTGGG---------------------------------------------------- 782 consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 TTCGTTGGCGTCAAGAATTTAAACATGAATTGTGCATTTCTTCAAGCCTAATGCGCTCAG 827 consensus_9303#1 GGCATTGGACTATCAATCGAAG-------------------------------------- 858 consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 ACGTTGTGTTCGTAATCGATGATAATAACTACTACAGAAGCATGCGCGTAGAATGGCAAA 887 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 AGATTGCCCGGAAACTTTCCATCGGTTATTTCGAATCCTATTTCGACACGTCTCTTTCGC 947 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 TTGCTCTGGAACGGAATCGGGAAAGAGCCCATCCAATCGGTGAAGATGTAATCAATCGTA 1007 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 TGTGGGCGCGTTTAGAAAAACCATGCGGCAAGCTTTACCACCAAGAGCATGACTTCATAA 1067 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 CAATTAACGACCTCAGTGTCGATTACGAAGTCATTGTGACAAAGATACAATATTGCTTTG 1127 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 AACATCCTCAGGAAAACCCAGCAGTACAGATGGTAGCAGAACCGATGGAACAATCAAACG 1187 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 TTCACAAGGTAGACATTATTTTGAGAAAATTGATATCAAAAAAGATCACCGAAGCGAAAG 1247 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 ------------------------------------------------------------ consensus_9303#3 ------------------------------------------------------------ consensus_9303#0 ATTCGATGACGGCAACGAAGCAAAATTTGCAATCGTACGCCAAAGTGCTGCAGGAAAGGA 1307 consensus_9303#1 ------------------------------------------------------------ consensus_9303#2 -------------------- consensus_9303#3 -------------------- consensus_9303#0 AAAAGTACGTACTGGAGCAG 1327 consensus_9303#1 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||