These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9315#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1408 fasta sequence [CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGT--------TCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA-AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA-GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC--TATCGTAAAACAACCACCGTGTTTTCTTTTTCT-TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG-TTTAAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCACGCACACTTCGCGGGGGTTTGTT] [+] EMBL BM631414 [CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAA AACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAA ] [+] EMBL BM653321 [ ccgGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGT TCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGGAGCCGCTACAGGCTACACA ] [+] EMBL BM613838 [ ccgCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGTCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACAACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCG ] [+] EMBL BX629252 [ GCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG TTTAAATTAGAG ] [+] EMBL BX629143 [ ACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTGTA AAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCA GGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACG TTTAAATTAGAG ] [+] EMBL BM656273 [ ccgCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGGGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGG GGCAGGGAAAGCTCATCAACTATATCGTAAAACAACCACCGTGTTTTCTTTTTTTCTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCACCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGT AAAAACCAGAAACGTTTTAAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCACGCACACTTCGCGGGGGTTTGTT] [+] EMBL BX603822 [ GAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAAC TATCGTAAAACAACCACCGTGTTTTCTTTTTCT TTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCA ] consensusID : consensus_9315#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 937 fasta sequence [CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCTGACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCGCATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT] [+] EMBL BM622111 [CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCTGACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCGCATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATG ] [+] EMBL BM591511 [ ccgTCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGCCCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAAGTTCCCGTTCATAATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGTCGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCG C CCATCACATGTCGCCGTCGCCGCTGCTC ] [+] EMBL BX628538 [ TCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAACAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGCCGCCGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATGCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATT ] [-] EMBL AGA281833 [ agaAACATGAAGCAGGCCGGCTCGGTCGTGCAGTCGTCGCCCGGTGCCGAGGACGAACCGATGCAGGCCCGATAAATCGATCG C CCATCACATGCCGCCGCCGTCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGGGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGCCGTTTCATCCTCCGGCCAAGCGAGCCAGCG ] [+] EMBL BM577741 [ CGCCGTCGCCGCTGCTCCCCAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT] consensusID : consensus_9315#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCGGGCGGCGGCGGTGGCGGCGGCCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCTCAATAGTCGGAACAATAATAACAACATCAACGTCACAGACGAACCGCGCCGG] [+] EMBL BM583890 [CCGCGGACGCGTGGGCGGACGCGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAGTTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAAAACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAAAGGCTACTCTCTCACTTGGCCAACCCAGGGAGCCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCGGTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCGGGCGGCGGCGGTGGCGGCGGCCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCTCAATAGTCGGAACAATAATAACAACATCAACGTCACAGACGAACCGCGCCGG] consensusID : consensus_9315#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 537 fasta sequence [ATCCCCCGAGGTTAAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGGTGCGTAACCACCAGCAACAGCAGCGTAGCGTGTGTTTTAGAGTAGAAGGAAGCGAAAGAAGCGAAAAAGAAAATAGNAAGCGAAGGGTGGTGGTCTTGCGTTTGTCGGTAGCGTGTCCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAACGCGCGTGGATCGATCACGGGGACCACGAGA] [+] EMBL AL692286 [ATCCCCCGAGGTTAAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACCGATACAGAAGTTGTGCAAGCGAAAGGAAGGAAGAAGTGTATTCTGAAAGTGTGTTTGTTTGGTCCGATATCATATCGCCCAGCCCTTGCGCCCAATTTCACCCCCCAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCGTGTGGAGCGCAATTCCACTGGAAGTCGCGTGGCCTGTTCGGTGTGTGTGTATTGTGAGTGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCGAAAAGTGTGCAGCAGCCGCCAGCAGGTGCGTAACCACCAGCAACAGCAGCGTAGCGTGTGTTTTAGAGTAGAAGGAAGCGAAAGAAGCGAAAAAGAAAATAGNAAGCGAAGGGTGGTGGTCTTGCGTTTGTCGGTAGCGTGTCCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAACGCGCGTGGATCGATCACGGGGACCACGAGA] consensusID : consensus_9315#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence [CCGCCCACGCGTCCGTGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT] [+] EMBL BM614377 [CCGCCCACGCGTCCGTGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGGCCCCGTATGATATGGTCGTTTCATCCTCCGGCCAAGCGAGCCAGCGAGGGACGGCAGGGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCATATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCTCGCGTTTGTGAGTGACAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACAAGTAGTGTGTTAAGCTAGAGCTGCGTGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 ------------------------------------------------------------ consensus_9315#1 CCGGAACCGCATCCAGCCGCCAAGCAAGATTCTTCACTTCTTCAACACACCGCCTGGGCT 60 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 ------------------------------------------------------------ consensus_9315#1 GACCGACGAGCAGCTGATTGCGGCATTCGGCAGCAACGATTGCCACCCGTCGCAAGTGCG 120 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 ------------------------------------------------------------ consensus_9315#1 CATGTTCCCGCTGAAATCGGAACGCTCCTCGTCCGGGCTGGTCGAGTTCCCGAGCGTCGC 180 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ---------------------------------------CCGCGGACGCGTGGGCGGACG 21 consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 ------------------------------------------------------------ consensus_9315#1 CCTTGCCGTCCAGGCGATCATGAAGTGCAACCACACCGCCATCGATCACAAAGGCACAAA 240 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 CGTGGGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAG 81 consensus_9315#3 --------------------------------------------------ATCCCCCGAG 10 consensus_9315#0 ---CCGGCGTTGCGTTCGCCGTGGTACGCGTTAGTTTCCGTTTTTCCTGAGCCCGCCGAG 57 consensus_9315#1 GTTCCCGTTCATCATGAAGCTCTGCTTCTCGTCCTCGAAAACGATGAACGGCGCGTGGAA 300 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 TTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 140 consensus_9315#3 GTT---AAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 66 consensus_9315#0 TTCTGAGAAGGAAGTGTTCCGTGCACAGCAATTCACAGCCGTGTTTTCTTCACC-GATAC 116 consensus_9315#1 CAACGAAAACATCGAGAACATGAAGCAGGCCGGCTCGGTCGTGCAGACGTCGCCCGGTGC 360 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAATCTGTACGTTCTAA 197 consensus_9315#3 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAAG-TGTGTTTGTTTG 122 consensus_9315#0 AGAAGTTGTGCAAGCGAAAG---GAAGGAAGAAGTGTATTCTGAAAG-TGTGTTTGTTTG 172 consensus_9315#1 CGAGGACGAACCGATGCAGGCCCGATAAATCGATCGTCGTCCATCACATGCCGCCGTCGC 420 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 AACAACAACAACAACAACACACTCTCACACCCCGTTCGACTGACACCTAACTCAATTCGA 257 consensus_9315#3 GTC--------CGATATCATA-TCGCCCAGCCCTTGCG-------CCCAATTTCACCCCC 166 consensus_9315#0 GTC--------CGATATCATA-TCGCCCAGCCCTTGCG-------CCCAATTTCACCCCC 216 consensus_9315#1 CGCTGCTCCC-CAAGACCGTTGCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGG 479 consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 GTAACAGCCAAAAAGCAAACAACTACAACTACAACAACAAACGAAAACAATAAACAACAA 317 consensus_9315#3 ----CAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCG-------TGTGGAGCGC 215 consensus_9315#0 ----CAACAAAAAATCACCCTGTCTCCTCCCCCCCCATTACCG-------TGTGGAGCGC 265 consensus_9315#1 C--GCAACCGTAGGGCTTCGGGGCAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAG 537 consensus_9315#4 ---------------------------------------------CCGCCCACGCGTCCG 15 consensus_9315#2 A---AGCACACACGAAAAAAAACTCACAAAACGCAAAGCGGCTGCCCGTGA-CCAACAAA 373 consensus_9315#3 A---ATTCCACTGGAAG------TCGCGTGGC-CTGTTCGG-TGTGTGTGT-ATTGTGAG 263 consensus_9315#0 A---ATTCCACTGGAAG------TCGCGTGGC-CTGTTCGG-TGTGTGTGT-ATTGTGAG 313 consensus_9315#1 ATGTGATGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGG 597 consensus_9315#4 ------TGCTTATAGAGATGAGGTGGCGTAATAGAAGAAGAAAAGCGATATTAATACCGG 69 * * * * * * consensus_9315#2 CAAGGCGCCA-AGGTGTGTTAAAGCCCACCTTCCCGCACAGCTTATATAAAAAAAAGCAA 432 consensus_9315#3 TGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCG-AAAAGTGTGCAG 322 consensus_9315#0 TGCTTTGTTGTGAGTGAGTGAGAGCAGAGCCCTCCAGAGTGTTTGCG-AAAAGTGTGCAG 372 consensus_9315#1 CCCCGTATGATATGGCCGTTTCATCCT-CCGGCCAAGCGAGCCAGCG--AGGGGCGGCAG 654 consensus_9315#4 CCCCGTATGATATGGTCGTTTCATCCT-CCGGCCAAGCGAGCCAGCG--AGGGACGGCAG 126 * ** * * * * * * *** consensus_9315#2 AGGCTACTCTCTCACT-TGGCCAACCCAGGGAGCCGCTACAGGCTACACAACC-CGCATC 490 consensus_9315#3 CAGCCGCC---------------AGCAGGTGCGTAACCACCAGCAACAGCA----GCGTA 363 consensus_9315#0 CAGCCGCCAGCAGTCT-GTACGTTCTAAAACAACAACAAC-AACAACACACTCTCACACC 430 consensus_9315#1 GGAAAGCTCATCAACTATCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTT 714 consensus_9315#4 GGAAAGCTCATCAACTGTCGTAAAACAACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTT 186 * * * consensus_9315#2 ACGATCGC---------------GTTCACGCAGCAAC-AGCATCCCCCCGG-TGCCGGTG 533 consensus_9315#3 GCG--TGT---------------GTTTTAG-AGTAGA-AGGAAGCGAAAGA-AGCGAAAA 403 consensus_9315#0 CCGTTCGACTGACACCTAACTCAATTCGAGTAACAGCCAAAAAGCAAACAACTACAACTA 490 consensus_9315#1 GTTGTTGTCCTGTGTCC------GATCCGGCATATTCATTCACCTTCCATAATGATGAAG 768 consensus_9315#4 GTTGTTGTCCTGTGTCC------GATCCGGCATATTCATTCACCTTCCATAATGATGAAG 240 * * * * * consensus_9315#2 TGATGATCA-TGGCGTCATTCAACGGTGGCAGTGC-CGCGGGCGGCGGCGGTGGCGGCGG 591 consensus_9315#3 AGAAAATAG-NA-----AGCGAAGGGTGGTGGTCT-TGCGTTTGTCGGTAGCG----TGT 452 consensus_9315#0 CAACAACAAACGAAAACAATAAACAACAAAAGCACACACGAAAAAAAACTCACAAAACGC 550 consensus_9315#1 CATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCT-CGCGTTCGTGAGTGGCAGCAACGC 827 consensus_9315#4 CATCGCTGCTCGTTTGTGGGCGGCACACGCGTTCT-CGCGTTTGTGAGTGACAGCAACGC 299 ** * consensus_9315#2 CCAGGATGGGCCGCACAACAAGCGGCTCTGTACCGGCCAGGAGATGGGCGAGGTGCCGCT 651 consensus_9315#3 CCGGAAGTACCCGGAGATCTTCCATCTCCACACACACACACACACAAACACAAA--CGCG 510 consensus_9315#0 AAAGCGGCTGCCCGTGACCAACAAACAAGGCGCCAAGGTGTGTTAAAGCCCACCTTCCCG 610 consensus_9315#1 TCACGACTCCTCGTCTATCCA-TATTGCGCTACAAGTAGTGTGTTAAGCTAGAG-CTGCG 885 consensus_9315#4 TCACGACTCCTCGTCTATCCA-TATTGCGCTACAAGTAGTGTGTTAAGCTAGAG-CTGCG 357 * * * * * * consensus_9315#2 CA---ATAGTCGGA-ACAATAATAAC-AACATCAACGTCACAGACGAACCGCGCCGG--- 703 consensus_9315#3 CG---TGGATCGATCACGGGGACCAC-GAGA----------------------------- 537 consensus_9315#0 CA---CAGCTTGTAAAAAAAAAGCA--AAGGCTACTCTCTCACTTGGCCAACCCAGGGAG 665 consensus_9315#1 TGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGT-------- 937 consensus_9315#4 TGAACTCAAGCAGCCGTAAAAACCAGAAACGTTTACATTAGAGATATGCTGTAGATGAGC 417 * * * consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 CCGCTACAGGCTACACAACCCGCATCACGATCGCGTTCACGCAGCAACAGCATCCCCCCG 725 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 AAAGGCTTGGCAAGAAAGAGGGAGAGCAAGAAAAGCGAAAAGCGCCACTATCCGCGCTCT 477 consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 GTGCCGGTGTGATGATCATGGCGTCATTCAACGGTGGCAGTGCCGCTCCCCAAGACCGTT 785 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 GCTTTGTGCGCGAAATGCTGCGATTCCGGTGCGAGTAGGCGCAACCGTAGGGCTTCGGGG 845 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 CAGGTTCATCCCTGTGTAATGTGTGTATGAGTGTTAGATGTGATGCTTATAGAGATGAGG 905 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 TGGCGTAATAGAAGAAGAAATGCGATATTAATACCGGCCCCGTATCATATTGCCGTTTCA 965 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 TCCTCCGGCCAAGCGAGCCAGCGAGGGGCGGCAGGGAAAGCTCATCAACTATCGTAAAAC 1025 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 AACCACCGTGTTTTCTTTTTCTTTTTTCTTCTTTGTTGTTGTCCTGTGTCCGATCCGGCA 1085 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 TATTCATTCACCTTCCATAATGATGAAGCATCGCTGCTCGTTTGTGGGCGGCACACGCGT 1145 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 TCTCGCGTTCGTGAGTGGCAGCAACGCTCACGACTCCTCGTCTATCCATATTGCGCTACA 1205 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 AGTAGTGTGTTAAGTTAGAGCTACGTGAACTCAAGCAGCCGTAAAAAACCAGAAACGTTT 1265 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 AAATTAGAGATATGCTGTAGATGAGCAAAGGCTTGGAAGAAAGAGGGAGAGCAAGAAAAG 1325 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ------------------------------------------------------------ consensus_9315#3 ------------------------------------------------------------ consensus_9315#0 CGAAAAGCGCCACTATCCGCGCTCTCCGTTTTGTGATGTGTGGGGGGGTTTGTGTGCGCA 1385 consensus_9315#1 ------------------------------------------------------------ consensus_9315#4 ------------------------------------------------------------ consensus_9315#2 ----------------------- consensus_9315#3 ----------------------- consensus_9315#0 CGCACACTTCGCGGGGGTTTGTT 1408 consensus_9315#1 ----------------------- consensus_9315#4 ----------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||