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Anopheles gambiae
cluster # 9319 cluster # 9319       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9319#0 length = 1609 sequences # 14  
consensus_9319#1 length = 614 sequences # 1  

consensusID : consensus_9319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1609
fasta sequence
                              [CCGCGGACGCGT--CCGGCCG-GCG-AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT---TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA-GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG-CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACGAGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGAACCTGTCGATCAAGAAGCCGCGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGAACCTGTTCCTGAAGGAAAACGGCCACGAGGTGCTGCGTGCCCTGCAGCCGCAGCTGCAGAAGAAGCTGTCGTCCGAATTCACCGGCATCGCTAACCAGCTGCTGGACAACGTTCCAATTCACTTCTTCATCGTAGACTAATGCGCAACGGGCGTAAGGCGCGCGCGCAAACTTTTGTTTCGGGACGGGCACTATGTGATACTGTTTGTTATAGAATTAAGCTCCCAGACCAGACCAGAACCGTGCGACCGTTGTTCGTGTCGTGCTTAGGCTTGTTAGCATTTTCTTTGCTTTTGCACAATATCGTTGTGTAACAAGAGAGTAGGACGCATTGCTGCGTTGTTGTTTTGAGAAACAAGCAAACGTTCAGTGTGATGCATTCTACGGTTATCGGGTGGTTAAATTTTGATGGTTAAGGAAACATCCCTTGCAGTACAAACGACAAAAAACAACGACAACAGCAAACATAATCAATTAGAGAAGCTTCATGAGAAATTTCAGCTCCAAAGGCGAGCCTAAAGCGCACTCGCTACAAAACAAGTTTATAATGTTGTGAATGTAGAAAACTCTTCTTATGCTTGATGTAATAA]

[+] EMBL BM636499             [CCGCGGACGCGT    GG GA GCG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAA CCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM596320             [CCGCCCACGCGT  CCGG TT GCGTTATTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAA CCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM638494             [CCGCGGACGCGTGGGCGGACGCGTG GGCTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCCCTCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCATATCATACGCGAAGCCCTTAATCCCTTAATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM657032             [                  CCG GCG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTCCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGTGCCTGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTATCGTGTGTGTGAGTGCGTTCCGTGTTGAAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCTGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM592159             [                  CCG GCG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCCCTCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCATATCATACGCGAAGCCCTTAATCCCTTAATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTGCCCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAACAAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM602389             [                  CCGAGCG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCCCTCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCATATCATACGCGAAGCCCTTAATCCCTTAATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGAGGACCTCAAGGATATCGGATCAACCTGAAAAACATGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM654916             [                   cc GCG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCCCTCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM619113             [                     ccgG AACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGT   TGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAA CCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08FM6             [                                       CGGACGTCCGTTGTGGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTCCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGTGCCTGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTATCGTGTGTGTGAGTGCGTTCCGTGTTGAAGTTTGTGATTGTCGTATCATACGCGAAG CCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCTGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGAAATTTTACCGTCCGGTCGATCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACGAGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGAACCTGTCGATCAAGAAGCCGCGCCTCAGCGTTTCGAAGATCTTCAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX606140             [                                                     GGTGGTTTGCCTCAGGTTTGCGCACTACTGTCTTCTCCCAGTTCCCAGATCCCCATACACCGGTGGCTGTCCGTGCCTGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAACGCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTATCGTGTGTGTGAGTGCGTTCCGTGTTGAAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCTGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACGAGAAACCGACGGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX604958             [                                                                                                                                                                                            GCTGTAGTGGAAGTGGTTAAAATA GGAAGTGTCAACACCCGTAATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCCCTCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCATATCATACGCGAAGCCCTTAATCCCTTAATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGAGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX622617             [                                                                                                                                                                                                         TGGTTANAATATGGAAGTGTCAACACCCGTNATTCGATTGAATTCCCAACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAA CCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCNCCCCTATCTGTCCANCGGCATCCCCGAGATAAAGCTACCCTCGGNCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCNAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTANCAATTTTACCGTCCGGNCGATCAAGTTGGCTGACGGCAGNAAACCATTCNAGACCCGGTTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTGCTGATCATCATCCCCGCCAGCGGATNCGGTGACTTCGATGCCGTGTTCGATGGTGTTACCGCCGACGTTAANGGACTCGTATCGACGAACGAGAAACCGACCGGNATGCATCTGCGCGTCTGAAAGCTCGACCTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM641148             [                                                                                                                                                                                                                                                           ccgCGGCGTACGTGCACAAGTGGACGCGTGTTAGAA CCTCCTCCCCTCCGTTTTGCAGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTTGAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGCTGAAGTTTGTGACCATTTGCTG CCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAATTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAGTTGGCTGACGGCAGCAAACCATTCGAGACCCGGTTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTGCTGATCATCATCCCCGCCAGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CNS08FM7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACGAGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGAACCTGTCGATCAAGAAGCCGCGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGAACCTGTTCCTGAAGGAAAACGGCCACGAGGTGCTGCGTGCCCTGCAGCCGCAGCTGCAGAAGAAGCTGTCGTCCGAATTCACCGGCATCGCTAACCAGCTGCTGGACAACGTTCCAATTCACTTCTTCATCGTAGACTAATGCGCAACGGGCGTAAGGCGCGCGCGCAAACTTTTGTTTCGGGACGGGCACTATGTGATACTGTTTGTTATAGAATTAAGCTCCCAGACCAGACCAGAACCGTGCGACCGTTGTTCGTGTCGTGCTTAGGCTTGTTAGCATTTTCTTTGCTTTTGCACAATATCGTTGTGTAACAAGAGAGTAGGACGCATTGCTGCGTTGTTGTTTTGAGAAACAAGCAAACGTTCAGTGTGATGCATTCTACGGTTATCGGGTGGTTAAATTTTGATGGTTAAGGAAACATCCCTTGCAGTACAAACGACAAAAAACAACGACAACAGCAAACATAATCAATTAGAGAAGCTTCATGAGAAATTTCAGCTCCAAAGGCGAGCCTAAAGCGCACTCGCTACAAAACAAGTTTATAATGTTGTGAATGTAGAAAACTCTTCTTATGCTTGATGTAATAA]


>consensus_9319#0 CCGCGGACGCGTCCGGCCGGCGAACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCC TCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTC CGTTGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAA CGCTGTAGTGGAAGTGGTTAAAATAGGAAGTGTCAACACCCGTAATTCGATTGAATTCCC AACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGC AGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTT GAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGC TGAAGTTTGTGACCATTTGCTGCCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAA TTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGG AAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCT CGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGAT ATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGA TCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGA TTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTG ACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACG AGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGAACCTGTCGATCAAGA AGCCGCGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGA ACCTGTTCCTGAAGGAAAACGGCCACGAGGTGCTGCGTGCCCTGCAGCCGCAGCTGCAGA AGAAGCTGTCGTCCGAATTCACCGGCATCGCTAACCAGCTGCTGGACAACGTTCCAATTC ACTTCTTCATCGTAGACTAATGCGCAACGGGCGTAAGGCGCGCGCGCAAACTTTTGTTTC GGGACGGGCACTATGTGATACTGTTTGTTATAGAATTAAGCTCCCAGACCAGACCAGAAC CGTGCGACCGTTGTTCGTGTCGTGCTTAGGCTTGTTAGCATTTTCTTTGCTTTTGCACAA TATCGTTGTGTAACAAGAGAGTAGGACGCATTGCTGCGTTGTTGTTTTGAGAAACAAGCA AACGTTCAGTGTGATGCATTCTACGGTTATCGGGTGGTTAAATTTTGATGGTTAAGGAAA CATCCCTTGCAGTACAAACGACAAAAAACAACGACAACAGCAAACATAATCAATTAGAGA AGCTTCATGAGAAATTTCAGCTCCAAAGGCGAGCCTAAAGCGCACTCGCTACAAAACAAG TTTATAATGTTGTGAATGTAGAAAACTCTTCTTATGCTTGATGTAATAA



consensusID : consensus_9319#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence
                              [CCGCCCACGCGTCCGCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAGTTGGCTGACGGCAGCAAACCATTCGAGACCCGGTTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTGCTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTTACCGCCGACGTTAAGGGACTCGTATCGACGAACGAGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGACCTGAACCTGTCGATCAAGAAGCCACGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGAACCTGTTCCTGAAGGAAAACGGCCACGAGGTTCTGCGTGCCCTGCAGCCGCAGCTGCAGAAGAAGCTGTCGTCCGAATTCACCGGCATCGCTAA]

[+] EMBL BM603212             [CCGCCCACGCGTCCGCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAGTTGGCTGACGGCAGCAAACCATTCGAGACCCGGTTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGCAGCGGTGTGCTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGATGGTGTTACCGCCGACGTTAAGGGACTCGTATCGACGAACGAGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGACCTGAACCTGTCGATCAAGAAGCCACGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGAACCTGTTCCTGAAGGAAAACGGCCACGAGGTTCTGCGTGCCCTGCAGCCGCAGCTGCAGAAGAAGCTGTCGTCCGAATTCACCGGCATCGCTAA]


>consensus_9319#1 CCGCCCACGCGTCCGCCCGGCCTGACCGACTGCCTGAAGGAAGCGCTGCAGCATCTGCGC CCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCTCGGTCGAGCCGTTCGTGATG GATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGATATCGGATCAACCTGAAAAAC ATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGATCAAGTTGGCTGACGGCAGC AAACCATTCGAGACCCGGTTGACCATTCCCCGGCTAACGATTCACGCCAAGTACACCAGC AGCGGTGTGCTGATCATCATCCCCGCCAGCGGATCCGGTGACTTCGATGCCGTGTTCGAT GGTGTTACCGCCGACGTTAAGGGACTCGTATCGACGAACGAGAAACCGACCGGCATGCAT CTGCGCGTCGAAAAGCTCGACCTGAACCTGTCGATCAAGAAGCCACGCCTCAGCGTTTCG AAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGAACCTGTTCCTGAAGGAAAAC GGCCACGAGGTTCTGCGTGCCCTGCAGCCGCAGCTGCAGAAGAAGCTGTCGTCCGAATTC ACCGGCATCGCTAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9319#0      CCGCGGACGCGTCCGGCCGGCGAACTCGACGATCGCGGACGTCCGTTGTGGTGGTTTGCC 60
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      TCAGGTTTGCGCACTACTGTCTTCTTCCAGTTCCCAGATCCCCATACACCGGTGGCTGTC 120
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      CGTTGTACCGTGCGGTGTATCCAGCCTCCAGTGCATCCCAAAGGGGGAAAACGAGAGTAA 180
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      CGCTGTAGTGGAAGTGGTTAAAATAGGAAGTGTCAACACCCGTAATTCGATTGAATTCCC 240
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      AACGTCCGGCGTACGTGCACAAGTGGACGCGTGTTAGAACCCTCCTCCCCTCCGTTTTGC 300
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      AGTGTCCAAGTGTGTGCGTGTCTGTGCGTAGTACCTTGTGTGTGAGTGCGTTCCGTGTTT 360
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      GAGTTTGTGATTGTCGTATCATACGCGAAGCCCTTAATCCCTTCATCAACGACACGATGC 420
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      TGAAGTTTGTGACCATTTGCTGCCTGCTGGGCTGGGCCGGCTGGGCCGTTGGGCAGGAAA 480
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      TTCCGCCGTACATCAAACAGTGTCGCCGTTCCGATCCCGGCCTGACCGACTGCCTGAAGG 540
consensus_9319#1      -------------------CCGCCCACGCGTCCG-CCCGGCCTGACCGACTGCCTGAAGG 40
                                           * *  **   *   *************************

consensus_9319#0      AAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCT 600
consensus_9319#1      AAGCGCTGCAGCATCTGCGCCCCTATCTGTCCAGCGGCATCCCCGAGATAAAGCTACCCT 100
                      ************************************************************

consensus_9319#0      CGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGAT 660
consensus_9319#1      CGGTCGAGCCGTTCGTGATGGATCAGCTGTCGCTGCAGCTCACCGGTGGACCTCAAGGAT 160
                      ************************************************************

consensus_9319#0      ATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGA 720
consensus_9319#1      ATCGGATCAACCTGAAAAACATGGAAGTGTTTGGCGCTAGCAATTTTACCGTCCGGTCGA 220
                      ************************************************************

consensus_9319#0      TCAAATTGGCTGACGGCAGCAAACCATTCGAGACCCGGCTGACCATTCCCCGGCTAACGA 780
consensus_9319#1      TCAAGTTGGCTGACGGCAGCAAACCATTCGAGACCCGGTTGACCATTCCCCGGCTAACGA 280
                      **** ********************************* *********************

consensus_9319#0      TTCACGCCAAGTACACCAGCAGCGGTGTACTGATCATCATCCCCGCCAGCGGATCCGGTG 840
consensus_9319#1      TTCACGCCAAGTACACCAGCAGCGGTGTGCTGATCATCATCCCCGCCAGCGGATCCGGTG 340
                      **************************** *******************************

consensus_9319#0      ACTTCGATGCCGTGTTCGATGGTGTCACCGCCGACGTTAAGGGACTCGTATCAACGAACG 900
consensus_9319#1      ACTTCGATGCCGTGTTCGATGGTGTTACCGCCGACGTTAAGGGACTCGTATCGACGAACG 400
                      ************************* ************************** *******

consensus_9319#0      AGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGATCTGAACCTGTCGATCAAGA 960
consensus_9319#1      AGAAACCGACCGGCATGCATCTGCGCGTCGAAAAGCTCGACCTGAACCTGTCGATCAAGA 460
                      **************************************** *******************

consensus_9319#0      AGCCGCGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGA 1020
consensus_9319#1      AGCCACGCCTCAGCGTTTCGAAGATCTTCAACAACAATCGCATTCTGACCGAAGCGACGA 520
                      **** *******************************************************

consensus_9319#0      ACCTGTTCCTGAAGGAAAACGGCCACGAGGTGCTGCGTGCCCTGCAGCCGCAGCTGCAGA 1080
consensus_9319#1      ACCTGTTCCTGAAGGAAAACGGCCACGAGGTTCTGCGTGCCCTGCAGCCGCAGCTGCAGA 580
                      ******************************* ****************************

consensus_9319#0      AGAAGCTGTCGTCCGAATTCACCGGCATCGCTAACCAGCTGCTGGACAACGTTCCAATTC 1140
consensus_9319#1      AGAAGCTGTCGTCCGAATTCACCGGCATCGCTAA-------------------------- 614
                      **********************************                          

consensus_9319#0      ACTTCTTCATCGTAGACTAATGCGCAACGGGCGTAAGGCGCGCGCGCAAACTTTTGTTTC 1200
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      GGGACGGGCACTATGTGATACTGTTTGTTATAGAATTAAGCTCCCAGACCAGACCAGAAC 1260
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      CGTGCGACCGTTGTTCGTGTCGTGCTTAGGCTTGTTAGCATTTTCTTTGCTTTTGCACAA 1320
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      TATCGTTGTGTAACAAGAGAGTAGGACGCATTGCTGCGTTGTTGTTTTGAGAAACAAGCA 1380
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      AACGTTCAGTGTGATGCATTCTACGGTTATCGGGTGGTTAAATTTTGATGGTTAAGGAAA 1440
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      CATCCCTTGCAGTACAAACGACAAAAAACAACGACAACAGCAAACATAATCAATTAGAGA 1500
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      AGCTTCATGAGAAATTTCAGCTCCAAAGGCGAGCCTAAAGCGCACTCGCTACAAAACAAG 1560
consensus_9319#1      ------------------------------------------------------------
                                                                                  

consensus_9319#0      TTTATAATGTTGTGAATGTAGAAAACTCTTCTTATGCTTGATGTAATAA 1609
consensus_9319#1      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)