These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9326#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2524 fasta sequence [GATCGCCCGAGGTCACTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAACGCCTCACGCCGTCCAGGTGTGTTGGAAATTAAGCATAGATCATCGTAGGGATGGGGTGATATGCAACGGATTTGTGGCAGGCGCAACGCAACATAGTGGCCACAACAGTCAATATAATACCAGGTTACAGAACGGGGGACAAAGTGATGCAGTGTAGAGAGAGAATTATACCTTTCCACGCATGTCTATCGTGAGAATATGAGTTTGTATGTATGATCATGTAATGTATGTATGCATGTATGTGTGTATGTATGGATGTGTGTATGCATGCAAGCAAACAACGNGCTCTGGCCGGCACTGGCTTAAGCTCGTAGCTACAGGCTCANGCTGTGCACGCTGGACTGCTAAAGTAAACAGGGCTAACGATCGTGTAATCAAACTTCTTAGTTCTGA-AGTGTAA-GAACAACATATACAAGCATATAACGCGTATGGATGTAATTGGTTTCGGAGGTAATGCAATAACAATTAGCTATAATTACATTCATAACTTTCGTAATAATTGTAGGGATAAGCAGGCAAGATCATCTACCAACCGTCTAAACCCCCAAACACATACACACACAAGTAATGTGTGACAAGAGATATCAGCTTCAAGCGTTTGAATTATTATAAACTATGTGGCCATGATGCAAGTAGCCCAAACATATTTGCATAGGTCGCACGTAAGTCAACGTTCTTTGGAATGTTTTTTGAGTTGTATATTTGATTTCCTTCTTTAATTGATTTAAACTGAACATTTTCATGCAACTAACCATTAGGCGCGGGCAACGAAAAATTACGAATAGCCTTCTTGACAGTCGCTGCAAAACAAAACACGTGTAAAGTACCAATTTAAAATGTATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAACAGGATTTTTAGATAATTTAATTTCAGAAATAGTACTACGATTGTTTAGGCAACCACATAGTTGTCACAAAACGTTGTCGAAAAGAAGATAGAGATCCACAACTGTTCGAGGACGGTATAAAATGAATCCACTTTCTGAACCAAAACATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTTAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTGTGGCAATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACAATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAATGCACCACGTTTCCAGTCGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTAGGGACGGGAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATATAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGCATAACAATGGCGGGGAAGGGGAGGGGAAGATTTATGTTAAGCGTAAAAGAAACGCTAAACCATGTAAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCAAGTATGTG--TGTGTGTATTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACACAGATGTGCATATCGAA-CCACGTG-GATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTATTTTATTAGTGTTTGTTTTACCAGTAGAATAAGAAACCGGAATACGAAGAAACATCTAAACATTGGACGTAAAGTGTAGTAAGCATTACGGAAACCAGCCCGCAACTCAATCGATTGATACTACAGTCCGAATGCACTAAATGAACTTCGATTGCAACTATTGAATTTGTGCCAGTTAATTGGCACGCTTTTT-TTCAAACAGAAAACATCCAGATTTTGTTCTTGATACGTGTTCTAAAATGCAAACTATTTAATTGTGTCTGTATTGCTTAAAATAATAATTATTCAATCATACCTCACCCAGACAAACTGCACCAACTATTGCAAATATGCGATTTTTCTCCCAATAGGAAATGACAATTGTATCAAGAGTGTAGATCAAAAGACGTAACCGGGCGGCTTTGCATTATAATACAGACAGTGGATTAACTTGCAATGAAATAAAATCAAACATCATCCGATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAA] [+] EMBL AL930071 [GATCGCCCGAGGTCACTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAACGCCTCACGCCGTCCAGGTGTGTTGGAAATTAAGCATAGATCATCGTAGGGATGGGGTGATATGCAACGGATTTGTGGCAGGCGCAACGCAACATAGTGGCCACAACAGTCAATATAATACCAGGTTACAGAACGGGGGACAAAGTGATGCAGTGTAGAGAGAGAATTATACCTTTCCACGCATGTCTATCGTGAGAATATGAGTTTGTATGTATGATCATGTAATGTATGTATGCATGTATGTGTGTATGTATGGATGTGTGTATGCATGCAAGCAAACAACGNGCTCTGGCCGGCACTGGCTTAAGCTCGTAGCTACAGGCTCANGCTGTGCACGCTGGACTGCTAAAGTAAACAGGGCTAACGATCGTGTAATCAAACTTCTTAGTTCTGACAGTGTAACGAACAACATATACAAGCAT ] [+] EMBL BM644103 [ ccgCAGGGCTAACGATCGTGTAATCAAACTTCTTAGTTCTGA AGTGTAA GAACAACATATACAAGCATATAACGCGTATGGATGTAATTGGTTTCGGAGGTAATGCAATAACAATTAGCTATAATTACATTCATAACTTTCGTAATAATTGTAGGGATAAGCAGGCAAGATCATCTACCAACCGTCTAAACCCCCAAACACATACACACACAAGTAATGTGTGACAAGAGATATCAGCTTCAAGCGTTTGAATTATTATAAACTATGTGGCCATGATGCAAGTAGCCCAAACATATTTGCATAGGTCGCACGTAAGTCAACGTTCTTTGGAATGTTTTTTGAGTTGTATATTTGATTTCCTTCTTTAATTGATTTAAACTGAACATTTTCATGCAACTAACCATTAGGCGCGGGCAACGAGAAATTACGAATAGCCTTCTTGACAGTCGCTGCAAAACAAAACACGTGTAAAGTACCAATTTAAAATGTATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAGCAGGATTTTTAGATAATTTAATTTCAGAAATAGTACTACGATTGTTTAGGCAACCACATAGTTGTCACAAAACGTTGTCGAAAAGAAGATAGAAATCAACTACTGTCCGAGAACGGTATAAAATGAATCCACTTTCTGAACCAAAA ATCAATGGAAGAAGGAATTGCACAGCACCAGGGA ] [+] EMBL AGA281460 [ tTTTTTTTTTTGATTTAAACTGAACATTTTCATGCAACTAACCATTAGGCGCGGGCAACGAAAAATTACGAATAGCCTTCTTGACAGTCGCTGCAAAACAAAACACGTGTAAAGTACCAATTTAAAATGTATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAACAGGATTTTTAGATAATTTAATTTCAGAAATAGTACTACGATTGTTTAGGCAACCACATAGTTGTCACAAAACGTTGTCGAAAAGAAGATAGAGATCCACAACTGTTCGAGGACGGTATAAAATGAATCCACTTTCTGAACCAAAACATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTTAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTGTGGCAATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACAATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCA CCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAATGCACCACGTTTCCAGTCGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTAGGGACGGGAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATATAATGCAGAGAATTG ] [+] EMBL BX620853 [ ATTGATTTAAACTGAACATTTTCATGCAACTAACCATTAGGCGCGGGCAACGAAAAATTACGAATAGCCTTCTTGACAGTCGCTGCAAAACAAAACACGTGTAAAGTACCAATTTAAAATGTATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAACAGGATTTTTAGATAATTTAATTTCAGAAATAGTACTACGATTGTTTAGGCAACCACATAGTTGTCACAAAACGTTGTCGAAAAGAAGATAGAGATCCACAACTGTTCGAGGACGGTATAAAATGAATCCACTTTCTGAACCAAAACATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTTAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTGTGGCAATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACAATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCA CCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAAT ] [+] EMBL BM630838 [ TATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAACAGGATTTTTAGATAATTTAATTTCAGAGGGGGGACTACGATTGTTTAGGCAATCACATAGTTGTCACAAAATGTTGTCGAAAAGAAGATAGAGATCCACAACTGTTCGAGGACGGTATAAAATGAATCCACTTTCTGAACCAAAACATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTGAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGGTTGGGGGGATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACGATGGGCCATGGGCCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTG ] [+] EMBL BM621487 [ ccGGCCATGGGCCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAATGCACCACGTTTCCAGTCGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAATTATTGGAACAACATTGCAATAATTTAGGGACGGGAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATATAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGCATAACAATGGCGGGGAAGGGGAGGGGAAGATTTATGTTAAGCGTAAAAGAAACGCTAAACCATGTAAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGC ] [+] EMBL BM647609 [ ccgCTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTAACACAATGTTGCGCCCCATTAAAGGCACCACGTTTCCAGACGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTGGGGACGGAAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATACAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGAATAACAATGGCGGGAAAGGGGAGGGGAAGATTTATGTT AGAAACGCTAAACCATGTAAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCAAGTATGTG TGTGTGTATTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACACAGATGTGCATATCGAACCCACGTGCGATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTATTTTATTAG ] [+] EMBL BX608033 [ GAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATATAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGCATAACAATGGCGGGGAAGGGGAGGGGAAGATTTATGTTAAGCGTAAAAGAAACGCTAAACCATGTAAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCATGTATGTGTTTGTGTGTATTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACACAGATGTGCATATCGAA CCACGTG GATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTATTTTATTAGTGTTTGTTTTACCAGTAGAATAAGAAACCGGAATACGAAGAAACATCTAAACATTGGACGTAAAGTGTAGTAAGCATTACGG ] [+] EMBL BM654410 [ ccgGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAGGTTCTTAAATTTTATTTCACTTCACTGCAATTAGTACATGCGAATACAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGAATAACAATGGCGGGAAAGGGGAGGGGAAGATTTATGTT AGAAACGCTAAACCATGTAAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCAAGTATGTG TGTGTGTATTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACACAGATGTGCATATCGAA CCACGTG GATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTATTTTATTAGTGTTTGTTTTACCAGTAGAATAAGAAACCGGAATACGAAGAAACATCTAAACATTGGACGTAAAGTGTAGAAAGCATTACGAAAACCAGCCCGCAACTCAATCGATTGATACTACAGTCCGAATGCACTAAATGAACTTCGATTGCAACTATTGAATTTGTGCCAGTTAATTGGCACGCTTTTTATTCAAACAGAAAACATCCAGATT ] [-] EMBL AGA283063 [ GGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCTGTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCATGTATGTGTTTGTGTGTATTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACACAGATGTGCATATCGAA CCACGTG GATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTATTTTATTAGTGTTTGTTTTACCAGTAGAATAAGAAACCGGAATACGAAGAAACATCTAAACATTGGACGTAAAGTGTAGTAAGCATTACGGAAACCAGCCCGCAACTCAATCGATTGATACTACAGTCCGAATGCACTGAATGAACTTCGATTGCAACTATTGAATTTGTGCCAGTTAATTGGCACGCTTTTT TTCAAACAGAAAACATCCAGATTTTGTTCTTGATACGTGTTCTAAAATGCAAACTATTTAATTGTGTCTGTATTGCTTAAAATAATAATTATTCAATCATACCTCACCCAGACAAACTGCACCAACTATTGCAAATATGCGATTTTTCTCCCAATAGGAAATGACAATTGTATCAAGAGTGTAGA ] [+] EMBL BM579095 [ ccgATGAACTTCGATTGCAACTATTGCATTTGTGCCAGTTAATTGGCACGCTTTTT TTCAAACAGAAAACATCCAGATTTTGTTCTTGATACGTCTTCTAAAATGCAAACTATTTAATTGTGTCTGTATTGCTTAAAATAATAATTATTCAATCATACCTCACCCAGACAAACTGCACCAACTATTGCAAATATGCGATTTTTCTCCCAATAGGAAATGACAATTGTATCAAGAGTGTAGATCAAAAGACGTAACCGGGCGGCTTTGCATTATAATACAGACAGTGGATTAACTTGCAATGAAATAAAATCAAACATCATCCGATTAC ] [+] EMBL CNS08NBI [ TTCTTGATACGTGTTCTAAAATGCAAACTATTTAATTGTGTCTGTATTGCTTAAAATAATAATTATTCAATCATACCTCACCCAGACAAACTGCACCAACTATTGCAAATATGCGATTTTTCTCCCAATAGGAAATGACAATTGTATCAAGAGTGTAGATCAAAAGACGTAACCGGGCGGCTTTGCATTATAACACAGACAGTGGATTAACTTACAATGAAATAAAATCAAACATCATCCGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCCCAA] consensusID : consensus_9326#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1128 fasta sequence [CCGGCTCAATTTGGCCTTTGTAGCTAATCTGTTCAACAATCATCCGGGACTGGACCAGCCGGAAGAGATCGAAGGGCTAGAGTCGATCGAGGAGACGCGCGAAGAGAAAACTTATCGCAACTGGATGAATTCGATGGGTGTCAAACCGCACGTGAACTGGCTGTACTCGGATCTGGCGGACGGACTCATCATTTTCCAGCTGTTCGACATTATTCAGCCGGGCAGTGTGCAGTGGAAGCGGGTGCATCAAAAATTCACACCGTTACGGAAGTTCATGGAAAAGCTGGAGAACTGCAACTATGCGGTTGAGCTAGGCAAGCAGCAAAAGTTTTCGCTGGTCGGCATTGCCGGACAGGATCTGAGCGATGGCAATGCGACGCTTACGCTGGCACTTATCTGGCAGCTGATGAGAGCTTACACGCTTTCGATTCTGTCCCGCTTGGCCAACACTGGCAATCCGATCATCGAGAAGGAAATTGTCCAGTGGGTGAACTCAAAGCTGCAGAGCGCAGGCAAACGGACGAGCCTGAAAAGCTTCCAGGATCCGGCGATCGCTGATGGCAAAATCATTATCGATCTGATCGATACGATCAAACCCGGCAGCATCAACTACGACAACGTCCGCGACGGTGGCAACCCGGAGGAGAACTTGGAGAACGCCAAGTACGCGGTGTCAATGGCACGTAAGATCGGTGCACGTGTTTACGCCCTGCCGGAGGATATCACCGAGGTGAAGGCAAAGATGATCATGACCGTGTTCGCCTGCCTGATGGCGATGGACTACGTGCCAAACATGGACAGTGCGAAATCGGCACCACCGGTCGCTGCAGTCGTTCAGGCTCCGGTTCCCCAGCAGCTTCCACAGCCACCCGTGGACAACGAACCGACGGTAGCAGCTCCAGCAGCGGTCGTAACCAACGGCACGAACGGGAACGGTACCGTCGGTGACGACGAAGAGGAGCATCATCTACAAGAGGAGCCGCAGGAAGCATCAGAGGAATCCACCACCGTACCGGCGACCACGGTCAGCGAAACGATACCATCCACCTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAACGCCTCACGCCGTCCAGGGTGTGTTGGAAATTAAGCA] [+] EMBL BM624914 [CCGGCTCAATTTGGCCTTTGTAGCTAATCTGTTCAACAATCATCCGGGACTGGACCAGCCGGAAGAGATCGAAGGGCTAGAGTCGATCGAGGAGACGCGCGAAGAGAAAACTTATCGCAACTGGATGAATTCGATGGGTGTCAAACCGCACGTGAACTGGCTGTACTCGGATCTGGCGGACGGACTCATCATTTTCCAGCTGTTCGACATTATTCAGCCGGGCAGTGTGCAGTGGAAGCGGGTGCATCAAAAATTCACACCGTTACGGAAGTTCATGGAAAAGCTGGAGAACTGCAACTATGCGGTTGAGCTAGGCAAGCAGCAAAAGTTTTCGCTGGTCGGCATTGCCGGACAGGATCTGAGCGATGGCAATGCGACGCTTACGCTGGCACTTATCTGGCAGCTGATGAGAGCTTACACGCTTTCGATTCTGTCCCGCTTGGCCAACACTGGCAATCCGATCATCGAGAAGGAAATTGTCCAGTGGGTGAACTCAAAGCTGCAGAGCGCAGGCAAACGGACGAGCCTGAAAAGCTTCCAGGATCCGGCGATCGCTGATGGCAAAATCATTATCGATCTGATCGATACGATCAAACCCGGCAGCATCAACTACGACAACGTCCGCGACGGTGGCAACCCGGAGGAGAACTTGGAGAACGCCAAGTACGCGGTGTCAATG ] [+] EMBL BM624823 [ CGAGCCTGAAAAGCTTCCAGGATCCGGCGATCGCTGATGGCAAAATCATTATCGATCTGATCGATACGATCAAACCCGGCAGCATCAACTACGACAACGTCCGCGACGGTGGCAACCCGGAGGAGAACTTGGAGAACGCCAAGTACGCGGTGTCAATGGCACGTAAGATCGGTGCACGTGTTTACGCCCTGCCGGAGGATATCACCGAGGTGAAGGCAAAGATGATCATGACCGTGTTCGCCTGCCTGATGGCGATGGACTACGTGCCAAACATGGACAGTGCGAAATCGGCACCACCGGTCGCTGCAGTCGTTCAGGCTCCGGTTCCCCAGCAGCTTCCACAGCCACCCGTGGACAACGAACCGACGGTAGCAGCTCCAGCAGCGGTCGTAACCAACGGCACGAACGGGAACGGTACCGTCGGTGACGACGAAGAGGAGCATCATCTACAAGAGGAGCCGCAGGAAGCATCAGAGGAATCCACCACCGTACCGGCGACCACGGTCAGCGAAACGATACCATCCACCTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAACGCCTCACGCCGTCCAGGGTGTGTTGGAAATTAAGCA] consensusID : consensus_9326#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 742 fasta sequence [GATGCCGAGGTTACCTTTTGTTTTCGAAACTTGTTCGCTGAACAATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAATGCACCACGTTTCCAGTCGTTCCTTTGCGCACCCGATTAACGCTCTAACATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTAGGGACGGGAANGACCATTCCTATAGGAACTAGGAACGGAACAACTAACACACTGGNTCTCACTACTTGCCTCTTGCCAAAATTTGCAAATCTNGACTCTGCCCCACTAGCGCTTCCTTANNACTNCNCACCTTCTCACCTTCCACCTGCCACACTCTAGTACCATGCCGAAACTACTTACATGGCCAAGCACGCANACTCGGTGTATCTTCCCCCCAACTTCTCTCTAACTTTCTCCACTTGGGCTAACCCAANGGCCTTAAGACCACATTNANCCCAACTGGGCCGGGGCGGAACAACGCGGGCCGCAGCGCGCGACACACGCAACTCNCTCACCTCGGCTCCCAACACGGCCCCGCTTACAACAACGGCACAACAACCCGCCCCTNNACACCACACCCAACTGGC] [+] EMBL AL692953 [GATGCCGAGGTTACCTTTTGTTTTCGAAACTTGTTCGCTGAACAATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACAATGTTGCGCCCCATTAAATGCACCACGTTTCCAGTCGTTCCTTTGCGCACCCGATTAACGCTCTAACATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTAGGGACGGGAANGACCATTCCTATAGGAACTAGGAACGGAACAACTAACACACTGGNTCTCACTACTTGCCTCTTGCCAAAATTTGCAAATCTNGACTCTGCCCCACTAGCGCTTCCTTANNACTNCNCACCTTCTCACCTTCCACCTGCCACACTCTAGTACCATGCCGAAACTACTTACATGGCCAAGCACGCANACTCGGTGTATCTTCCCCCCAACTTCTCTCTAACTTTCTCCACTTGGGCTAACCCAANGGCCTTAAGACCACATTNANCCCAACTGGGCCGGGGCGGAACAACGCGGGCCGCAGCGCGCGACACACGCAACTCNCTCACCTCGGCTCCCAACACGGCCCCGCTTACAACAACGGCACAACAACCCGCCCCTNNACACCACACCCAACTGGC] consensusID : consensus_9326#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence [CCGCCCACGCGTCCGCTTTCTGAACCAAAAAATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTGAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTGTGGCAATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACGATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTAACACAATGTTGCGCCCCATTAAAGGCACCACGTTTCCAGACGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTGGGGACGGAAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAAGGTCTTA] [+] EMBL BM594574 [CCGCCCACGCGTCCGCTTTCTGAACCAAAAAATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAAAAGTAGAAACTTTGAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTGTGGCAATATTTTTACCCTTTTGTTTTCGAAACTTGTTCGCTGAACGATGGGCCATGGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGCAAAAATTAGCAGTTATGTGCCAAACTGAAATTAAATTGTTCACCCCCTTCACATAATTTACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTAACACAATGTTGCGCCCCATTAAAGGCACCACGTTTCCAGACGTTCCTTTGCGCACCCGATTAACGCTCTAAATGGTTAAAGAATTACTATCAACTATTGGAACAACATTGCAATAATTTGGGGACGGAAAAGAAATTCCTATAGGAATAGGAAGGAACAACTAACACATGGTTATATTGCTTTGCAAATTTGCAATTTGATTGAAATAAGGTCTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9326#0 GATCGCCCGAGGTCACTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAAC 60 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 GCCTCACGCCGTCCAGGTGTGTTGGAAATTAAGCATAGATCATCGTAGGGATGGGGTGAT 120 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 ATGCAACGGATTTGTGGCAGGCGCAACGCAACATAGTGGCCACAACAGTCAATATAATAC 180 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 CAGGTTACAGAACGGGGGACAAAGTGATGCAGTGTAGAGAGAGAATTATACCTTTCCACG 240 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 CATGTCTATCGTGAGAATATGAGTTTGTATGTATGATCATGTAATGTATGTATGCATGTA 300 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TGTGTGTATGTATGGATGTGTGTATGCATGCAAGCAAACAACGNGCTCTGGCCGGCACTG 360 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 GCTTAAGCTCGTAGCTACAGGCTCANGCTGTGCACGCTGGACTGCTAAAGTAAACAGGGC 420 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TAACGATCGTGTAATCAAACTTCTTAGTTCTGAAGTGTAAGAACAACATATACAAGCATA 480 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TAACGCGTATGGATGTAATTGGTTTCGGAGGTAATGCAATAACAATTAGCTATAATTACA 540 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TTCATAACTTTCGTAATAATTGTAGGGATAAGCAGGCAAGATCATCTACCAACCGTCTAA 600 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 ACCCCCAAACACATACACACACAAGTAATGTGTGACAAGAGATATCAGCTTCAAGCGTTT 660 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 GAATTATTATAAACTATGTGGCCATGATGCAAGTAGCCCAAACATATTTGCATAGGTCGC 720 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 ACGTAAGTCAACGTTCTTTGGAATGTTTTTTGAGTTGTATATTTGATTTCCTTCTTTAAT 780 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TGATTTAAACTGAACATTTTCATGCAACTAACCATTAGGCGCGGGCAACGAAAAATTACG 840 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 AATAGCCTTCTTGACAGTCGCTGCAAAACAAAACACGTGTAAAGTACCAATTTAAAATGT 900 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 ATAACTTAGGCTCAGATTAACTTGCGCTACCGGCGTGGAGGGACATAGGAGAACAGGATT 960 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TTTAGATAATTTAATTTCAGAAATAGTACTACGATTGTTTAGGCAACCACATAGTTGTCA 1020 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 CAAAACGTTGTCGAAAAGAAGATAGAGATCCACAACTGTTCGAGGACGGTATAAAATGAA 1080 consensus_9326#3 -------------------------------------------------CCGCCCACGCG 11 consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------CCGGCTCAATTTGGCCTTTGTAGCTAATCTGTTCAACAATCATCCGGGACTGGA 54 consensus_9326#0 TCCACTTTCTGAACCAAAACATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAA 1140 consensus_9326#3 TCCGCTTTCTGAACCAAAAAATCAATGGAAGAAGGAATTGCACAGCACCAGGGAATTTAA 71 consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 CCAGCCGGAAGAGATCGAAGGGCTAGAGTCGATCGAGGAGACGCGCGAAGAGAAAACTTA 114 consensus_9326#0 AAGTAGAAACTTTTAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTG 1200 consensus_9326#3 AAGTAGAAACTTTGAAAGAATGATTGATTGCAATAACACATCCTTTCGCGCAATCGTTTG 131 consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 TCGCAACTGGATGAATTCGATGGGTGTCAAACCGCACGTGAACTGGC-TGTACTCGGATC 173 consensus_9326#0 TGGCA-ATATTTTTACCCTTTTG----TTTTCGAAACTTGTTCGCTGAACAATGGGCCAT 1255 consensus_9326#3 TGGCA-ATATTTTTACCCTTTTG----TTTTCGAAACTTGTTCGCTGAACGATGGGCCAT 186 consensus_9326#2 -GATG-CCGAGGTTACC-TTTTG----TTTTCGAAACTTGTTCGCTGAACAATGGGCCAT 53 consensus_9326#1 TGGCGGACGGACTCATCATTTTCCAGCTGTTCGACATTATTCAGCCGGGCAGTGTGCAGT 233 * * * * **** * ***** * * * ** * * ** ** * consensus_9326#0 GGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGC 1315 consensus_9326#3 GGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGC 246 consensus_9326#2 GGGTCCATTTGTTTCATTAAACCAAAAGACAGAATATTAAAAACGTAAACAAAACAAAGC 113 consensus_9326#1 GGAAGCGGGTGCATCA-------AAAATTCACACCGTTACGGAAGTTCATGGAAAAGCTG 286 ** * ** *** **** ** * *** * ** * ** * consensus_9326#0 AAAAATTAGCAGTTATGTGCCAAACTGAAATTA--AATTGTTCACCCCCTTCACATAATT 1373 consensus_9326#3 AAAAATTAGCAGTTATGTGCCAAACTGAAATTA--AATTGTTCACCCCCTTCACATAATT 304 consensus_9326#2 AAAAATTAGCAGTTATGTGCCAAACTGAAATTA--AATTGTTCACCCC-TTCACATAATT 170 consensus_9326#1 GAGAACT-GCAACTATGCGGTTGAGCTAGGCAAGCAGCAAAAGTTTTCGCTGGTCGGCAT 345 * ** * *** **** * * * * * * * * consensus_9326#0 TACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACA-ATGTTGCGCC 1432 consensus_9326#3 TACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTAACACA-ATGTTGCGCC 363 consensus_9326#2 TACGACACGGTGGCACATTATATGCTTAGCAATGCTTGCAAGTGACACA-ATGTTGCGCC 229 consensus_9326#1 TGCCGGACAGGATCTGAGCGATGGCAATGCGACGCTTACGC-TGGCACTTATCTGGCAGC 404 * * ** * * * ** ** * **** * * *** ** * ** * consensus_9326#0 CCATTAAATGCACCACGTTTCCAGTCGT-TCCTTTGCGCACCCGATTAACGCTCTAA--A 1489 consensus_9326#3 CCATTAAAGGCACCACGTTTCCAGACGT-TCCTTTGCGCACCCGATTAACGCTCTAA--A 420 consensus_9326#2 CCATTAAATGCACCACGTTTCCAGTCGT-TCCTTTGCGCACCCGATTAACGCTCTAAC-A 287 consensus_9326#1 TGATGAGAGCTTACACGCTTTCGATTCTGTCCCGCTTGGCCAACACTGGCAATCCGATCA 464 ** * * **** ** * * *** * * * * * ** * * consensus_9326#0 TGGTTAAAGAATTACTATCAACTATTGGAAC--AACATTGCAATAATTTAGGGACGGGAA 1547 consensus_9326#3 TGGTTAAAGAATTACTATCAACTATTGGAAC--AACATTGCAATAATTTGGGGACGGAAA 478 consensus_9326#2 TGGTTAAAGAATTACTATCAACTATTGGAAC--AACATTGCAATAATTTAGGGACGGGAA 345 consensus_9326#1 TCGAGAAGGAA--ATTGTCCAGTGGGTGAACTCAAAGCTGCAG-AGCGCAGGCAAACGGA 521 * * ** *** * * ** * * **** ** **** * ** * * consensus_9326#0 AGAA-ATTCCTATAGGAA-TAGGAA-GGAACAACTAACACA-TGGTTATATTGCTTTGCA 1603 consensus_9326#3 AGAA-ATTCCTATAGGAA-TAGGAA-GGAACAACTAACACA-TGGTTATATTGCTTTGCA 534 consensus_9326#2 NGACCATTCCTATAGGAACTAGGAACGGAACAACTAACACACTGGNTCTCACTACTTGCC 405 consensus_9326#1 CGAG---CCTGAAAAGCTTCCAGGATCCGGCGATCGCTGA--TGGCAAAATCATTATCGA 576 ** * * * * * * * * *** * consensus_9326#0 AATTTGCAATTTGATTGAAATAGG-TTCTTAAATTTTATTTCACTTCACTGCAATTAGTA 1662 consensus_9326#3 AATTTGCAATTTGATTGAAATAAG-GTCTTA----------------------------- 564 consensus_9326#2 TCTTGCCAAAATTTGCAAATCTNG-ACTCTGCCCCACTAGCGCTTCCTTANNACTNCNCA 464 consensus_9326#1 TCTGATCGATACGATCAAACCCGGCAGCATCAACTACGACAACGTCCGCGACGGTGGCAA 636 * * * ** * * consensus_9326#0 CATGCGAATATAATGCAGAGAATTGTGTTCTCCCATTTATTCATGTACAGCTAGCATAAC 1722 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 CCTTCTCACCTTCCACCTGCCACACTCTAGTACC----ATGCCGAAACTACTTACATGGC 520 consensus_9326#1 CCCGGAGG---AGAACTTGGAGAACGCCAAGTACGCGGTGTCAATGGCACGTAAGATCGG 693 consensus_9326#0 AATGGCGGGGAAGGGGAGGGGAAGATTTATGTTAAGCGTAAAAGAAACGCTAAACCATGT 1782 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 CAAGCACGCANACTCGGTGTAT---CTTCCCCCCAACTTCTCTCTAACTTT---CTCCAC 574 consensus_9326#1 TGCACGTGTTTACGCCCTGCCGGAGGATATCACCGAGGTGAAGGCAAAGAT-----GATC 748 consensus_9326#0 AAAGGGCGAATAATTAGCGTAAAAAGGATGACTAAACCATTCAGAATGAAAAATCTATCT 1842 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 TTGGGCTAACCCAANGGCCTTAAGACCACATTNANCCCAACTGGGCCGGGGCGGAACAAC 634 consensus_9326#1 ATGACCGTGTTCGCCTGCCTGATGGCGATGGACTACGTG-CCAAACATGGACAGTGCGAA 807 consensus_9326#0 GTAAAATGCAGTATTAGGTTCATTGTATTGTTCGTGAGCGTGCAAGTATGTGTGTGTGTA 1902 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 GCGGGCCGCAGCGCGCGACACA----------CGCAACTCNCTCACCTCGGCTCCCAACA 684 consensus_9326#1 ATCGGCACCACCGGTCGCTGCAGTCGTTCAGGCTCCGGTTCCCCAGC---AGCTTCCACA 864 consensus_9326#0 TTGCATCATTCATACCGATGATGTTTTATCCGCGCACGCTCACACATAAACACATAAACA 1962 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 CGGCCCCGCTTACAACAACGGCACAACAACC-CGCCCCTNNACACCACACCCAACTGGC- 742 consensus_9326#1 GCCACCCGTGGACAACGAACCGACGGTAGCAGCTCCAGCAGCGGTCGTAACCAACGGCAC 924 consensus_9326#0 CAGATGTGCATATCGAACCACGTGGATTGAAAAGCTTATGTTTGATGCTTCTTTGAATTA 2022 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 GAACGGGAACGGTACCGTCGGTGACGACGAAGAGGAGCATCATCTACAAGAGGAGCCGCA 984 consensus_9326#0 TTTTATTAGTGTTTGTTTTACCAGTAGAATAAGAAACCGGAATACGAAGAAACATCTAAA 2082 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 GGAAGCATCAGAGGAATCCACCACCGTACCGGCGACCACGGTCAGCGAAACGATACCATC 1044 consensus_9326#0 CATTGGACGTAAAGTGTAGTAAGCATTACGGAAACCAGCCCGCAACTCAATCGATTGATA 2142 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 CACCTCACCTACACCGCCGCAAACCAACGATGAGTTCGCCGATTGAACGCCTCACGCCGT 1104 consensus_9326#0 CTACAGTCCGAATGCACTAAATGAACTTCGATTGCAACTATTGAATTTGTGCCAGTTAAT 2202 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 CCAGGGTGTGTTGGAAATTAAGCA------------------------------------ 1128 consensus_9326#0 TGGCACGCTTTTTTTCAAACAGAAAACATCCAGATTTTGTTCTTGATACGTGTTCTAAAA 2262 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TGCAAACTATTTAATTGTGTCTGTATTGCTTAAAATAATAATTATTCAATCATACCTCAC 2322 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 CCAGACAAACTGCACCAACTATTGCAAATATGCGATTTTTCTCCCAATAGGAAATGACAA 2382 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 TTGTATCAAGAGTGTAGATCAAAAGACGTAACCGGGCGGCTTTGCATTATAATACAGACA 2442 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 GTGGATTAACTTGCAATGAAATAAAATCAAACATCATCCGATTACAAAAAAAAAAAAAAA 2502 consensus_9326#3 ------------------------------------------------------------ consensus_9326#2 ------------------------------------------------------------ consensus_9326#1 ------------------------------------------------------------ consensus_9326#0 AAAAAAAAAAAAAAAAGCCCAA 2524 consensus_9326#3 ---------------------- consensus_9326#2 ---------------------- consensus_9326#1 ---------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||