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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9329#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1397 fasta sequence
[CTCAGGCAAGAATTGCCCAGGTTTTATGCAGAGCTGAAGAATATGGTGCTGCAGTGACATCTCTAATCAACCGAAACAACAATCAACAAGCCCGTACATTACGGAAGTGCAGAAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCTTGTTTCAACAATAAGTGCTGGACCTGGGAGTGTATACGAGAGCCATCGATGCAAGGGATGAGTGCCTGGCAACTGTAACCTGTCCGGTGTTTGCCAAACCATTCGTATGCATTGCGCTGCAAAGCAACCGGTACCGAAATGCCACACACGACTGGCAAAAATATTTTGTACCCGTCATGGAAAAGCCCTGGTTAATTCAACTGCCCNGTGCACGTGATTTGGTCTTGGCCAAATTGTGANGCTTACTCGTGCCGTGNNACTAAAGGATTAACACCTGGTTACAGTGTGTTGTAATTGTAACCTTGCAGCAGCTGGAGATCCAATCTCCTCGCGCCTTGGTTCCACACGCGANGTGCCCAATCAGGTTCCATTACGTAAGCAAGCTGTGCCTTAAGATCCCGTATATTGTCAGTGTACCAGNAGTCGTATACAGTTCGATATATTATGNATTGTCGCTCNTAANNTTTTAAACCGTNGTTTAACCCAACAGCCAGCAATTCCCCCAAAAAAAGGGCCTCCCTTGGTTGAAGGACCCTATTCCACAACGTCCCACNCACCAACGATGCCGTACGCGTTACATTCCTCACNGTTTACCTTCAGGAAAAACCTTGGCGATNGGGGCGCCACCAGGAACCACACTGTGGCCTATGCACACACGCCAGAGNACANATTTAAGCCCGGTTTGCATNACATTTAGGTGNGNCCTTTNGGCNGTTCCCACGCNAAGGCCAANCAACTTCGCGTTNGGGACGACACGGCGCCATTATTTGCACACCACGGAACTTACGTTTAACTTTACTCGTCAAGCATTTCGTNAACGCGCGTGGAACAACAGCCGACACGACTTGGTACAAACACCCCATTTTATACACGATTTGCCCGACGGGNCACACTTGGCAACACCTTTCACAACGTNATNGNATANTGGGAGGCCACCCACAACTTCCCCGGCGAACAATNGATTTCCGACACAGACGCTTAAAAGACTGCCTCGTGCCTTAAAGANCAGGGCCTACAGAGGGTAGANTTAAAACGTAACAACGCTGTTGGGGANAANCGCACACAAGCAAGTATNCCCTGNCCAACTCTCCCCTTTTTCATCAACACACNCNCAAAGTCGTGGACCACTTTGGGAACATTCNCCAGNTCCCCCNCCAAAGCACTGGAGTTATGTCCGGAGCAACAACACCCACAATTTTGCTAGGGCGCCGCAAACCCGGTNTACNACGNATGGCANCTTTTNGGGT]
[+] EMBL AL693863 [CTCAGGCAAGAATTGCCCAGGTTTTATGCAGAGCTGAAGAATATGGTGCTGCAGTGACATCTCTAATCAACCGAAACAACAATCAACAAGCCCGTACATTACGGAAGTGCAGAAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCTTGTTTCAACAATAAGTGCTGGACCTGGGAGTGTATACGAGAGCCATCGATGCAAGGGATGAGTGCCTGGCAACTGTAACCTGTCCGGTGTTTGCCAAACCATTCGTATGCATTGCGCTGCAAAGCAACCGGTACCGAAATGCCACACACGACTGGCAAAAATATTTTGTACCCGTCATGGAAAAGCCCTGGTTAATTCAACTGCCCNGTGCACGTGATTTGGTCTTGGCCAAATTGTGANGCTTACTCGTGCCGTGNNACTAAAGGATTAACACCTGGTTACAGTGTGTTGTAATTGTAACCTTGCAGCAGCTGGAGATCCAATCTCCTCGCGCCTTGGTTCCACACGCGANGTGCCCAATCAGGTTCCATTACGTAAGCAAGCTGTGCCTTAAGATCCCGTATATTGTCAGTGTACCAGNAGTCGTATACAGTTCGATATATTATGNATTGTCGCTCNTAANNTTTTAAACCGTNGTTTAACCCAACAGCCAGCAATTCCCCCAAAAAAAGGGCCTCCCTTGGTTGAAGGACCCTATTCCACAACGTCCCACNCACCAACGATGCCGTACGCGTTACATTCCTCACNGTTTACCTTCAGGAAAAACCTTGGCGATNGGGGCGCCACCAGGAACCACACTGTGGCCTATGCACACACGCCAGAGNACANATTTAAGCCCGGTTTGCATNACATTTAGGTGNGNCCTTTNGGCNGTTCCCACGCNAAGGCCAANCAACTTCGCGTTNGGGACGACACGGCGCCATTATTTGCACACCACGGAACTTACGTTTAACTTTACTCGTCAAGCATTTCGTNAACGCGCGTGGAACAACAGCCGACACGACTTGGTACAAACACCCCATTTTATACACGATTTGCCCGACGGGNCACACTTGGCAACACCTTTCACAACGTNATNGNATANTGGGAGGCCACCCACAACTTCCCCGGCGAACAATNGATTTCCGACACAGACGCTTAAAAGACTGCCTCGTGCCTTAAAGANCAGGGCCTACAGAGGGTAGANTTAAAACGTAACAACGCTGTTGGGGANAANCGCACACAAGCAAGTATNCCCTGNCCAACTCTCCCCTTTTTCATCAACACACNCNCAAAGTCGTGGACCACTTTGGGAACATTCNCCAGNTCCCCCNCCAAAGCACTGGAGTTATGTCCGGAGCAACAACACCCACAATTTTGCTAGGGCGCCGCAAACCCGGTNTACNACGNATGGCANCTTTTNGGGT]
consensusID : consensus_9329#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1141 fasta sequence
[AAGAATCGGCNGAGGCTGCACAAACAGTTCGCACATGTTTGCAAGCCGTGCAGCAAAGGGTTTCTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC-GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG-CGA-GCTGGAGGAGGA--A-GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG-AAGAATATGGTGCTGCA-GGACATCT-CTAATCAACCGAAACAA-CAATCAACAA-CCCGTCCACTA-CGAAAAT-GCA-GGAA-CAAAAGTACCT-GCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTCTGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTGTATGTACTGCGAGCGAGATCAATCTCTCGGCTGGTTCAAGCAGTGCCATAGTTCATGCTAAGAAGCGGCTAGTCCGTTTGTAGGACAGAGTCGTTCGTTCATT-TTATTTTATTACTTTACAACACATCCAAAGCTCTGTGAGCTTCAAGCAACAGGTAGTAGCTAATATCGG-AACTGGTGGGCAAGAAAGG-TTGCAGCAAATACGTTTCT-GCTGCTCAGA]
[+] EMBL BX468621 [AAGAATCGGCNGAGGCTGCACAAACAGTTCGCACATGTTTGCAAGCCGTGCAGCAAAGGGTTTCTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATCGGGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTGGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGAGGCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAAGCAATCAA ]
[+] EMBL BM576443 [ ccgCATGTTTGCAAGCCGTGCAGCAAAGGGCTTTTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCGTCGTTACAAATGAAATGTACAATCCTGCGTTGCTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTAACGAAACAGAACGCTTCCAACAACACGACCGAGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGGACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATTCAGATTTCATTCCGATGTTAATC GGTCAATCGCATTACAAGATTGATCTGAGATCGCTTATCAAGGAAGCCCGCGCGAACAAGTGGCGTAATACGACGTTAGATGAAATTTGTGCAGATTTTGACGCGAACGGGACTCCCTGCCGA GCTGGAGGAGGAGGAGGTGGACCTGCAGGCAAAGCACGCGCCGGAAATGGATGGAAGCGAACTTATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTACATTA CGGAAGT GCA GAAA C ]
[+] EMBL BM609181 [ ccgGCCGTGCAGCAAAGGGTTCTTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATTGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTACAATCCTGCGTTACTAGTGTAAAACATTGCTTATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCAGGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGGACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGGGGTCGCTTATCATGGAAGCCCGGGCAAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGGACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTAATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCACTA CGGAAAT GCA GAAA CAAAAGTACCT GCG ]
[+] EMBL BX628686 [ GCCGTGCAGCAAAGGGTTTCTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCACTA CGAAAAT GCA GGAA CAAAAGTACCT GCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTG ]
[+] EMBL BX623922 [ GTGCANCAAAGGGTTTCTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTGAAAGAATATGGTGCTGCAGGGACATCTCCTAATCAACCGAAACNA CAATCAACAACCCCGTCCACTACCGAAAATGGCAGGGAACCAAAAGTACCTGGCGAGCT ]
[+] EMBL CNS08UGE [ AGCAAAGGGCTTTTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGAATAATTTTAATGCGTCGTTACAAATGAAATGTACAATCCTGCGATGCTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTAACGAAACAGAACGCTTCCAACAACACGACCGAGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGGACGAGCAAATGAATGAGGCTGCAAGAAAATTTTTAAAAAATTATTCAGATTTCATTCCGATGTTAATC GGTCAATCGCATTACAAGATTGATCTGAGATCGCTTATCAAGGAAGCCCGCGCGAACAAGTGGCGTAATACGACGTTAGATGAAATTTGTGCAGATTTTGACGCGAACGGGACTACCTG CGA GCTGGAGGAGGAGGAGGTGGACCTGCAGGCAAAGCACGCGCCGGAAATGGATGGAAGCGAACTTATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCATTA CGGAAGT GCA GAAA CAAAAGTACCT GCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAAAAAAACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTCTGGCAATGGAGCTACGGCG ]
[+] EMBL AL932914 [ tcgcccgaGGTTATCCGCA TG TTGGTCAGCTTTTT ATGTGTTTTCGCTTAATCGCTTTTGTTTGTGT ATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAA AA CCCGTCCACTA CGAAAAT GCA GGAA CAAAAGTACCT GCGAGCTGGATCACTGTGTGTTCTG TTCAACAATAAGGCGGA CGGGAGGTATACGAGAG CATCGATGCA GATGAGGCC GC ACGTAA CTGTCGGGTG AACATTCGTATGCATGC ]
[+] EMBL BX623803 [ TGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACNACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCT ]
[+] EMBL BX603309 [ TCGCTTAATCGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCACTA CGAAAAT GCA GGAA CAAAAGTACCT GCGAGCTGGATC ]
[+] EMBL BX626423 [ ATGTATAATCCTGCGTTACTAGTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATC GGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCACTA CGAAAAT GCA GGAA CNAAAGTACCT GCGAGCTGGATCAC ]
[-] EMBL CNS08UGF [ GTGTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTAACGAAACAGAACGCTTCCAACAACACGACCGAGGAAGCATTGTGGAAACTAAAACTCGCTCCATACGGTTGGGACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATTCAGATTTCATTCCGATGTTAATC GGTTAATCGCATTACAAGATTGATCTGAGATCGCTTATCAAGGAAGCCCGCGCGAACAAGTGGC GTTTACGACGTTAGATGAAATTTGTGCAGATTTTGACGCGAACGGGACTACCTG CGA GCTGGAGGAGGAGGAGGTGGACCTGCAGGCAAAGCACGCGCCGGAAATGGATGGAAGCGAACTTATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCATTA CGGAAGT GCA GAAA CAAAAGTACCT GCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTTTCTGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTGTATGTACTGCGAGCGAGATCAATCTCTCGGCTGGTTCAAGCAGTGCCATAGTTCATGCTAAGAAGCGGCTAGTCCGTTTGTAGGACAGAGTCGTTCGTTCATT TTATTTTATTACTTTACAACACATCCAAAGCTCTGTGAGCTTCAAGCAACAGGTAGTAGCTAATATCGG AACTGGTGGGCAAGAAAGG TTGCAGCAAATACGTTTCT GCTGCTCAG ]
[+] EMBL BX625504 [ CCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTG CGA GCTGGAGGAGGA A GTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTG AAGAATATGGTGCTGCA GGACATCT CTAATCAACCGAAACAA CAATCAACAA CCCGTCCACTA CGAAAAT GCA GGAA CAAAAGTACCT GCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTCTGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTGTATGTACTGCGAGCGAGATCAATCTCTCGGTTGGTTCAAGCAGTGCCATAGTTCATAGTAAGAAGCGGCTAGTCCGTTTGTAGGACAGAGTCGTTCGTTCATTCCTTTTTTATTACTTTACAACACATCCAAAGCTCTGTGAGCTTCAAGCAACAGGTAGTAGCTGACATCGGAAACTGGTGGGCAAGAAAGGCTTGCAGCAAATATGTTTTTGGCTGCTCNGA]
consensusID : consensus_9329#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGAACAGTTCGCACATGTTTGCAAGCCGTGCGGCAAAGGGTTCTTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATTGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTACAATCCTGCGTTATTAGTGTAAAACATTGCTTATTCCCGAAAGCAAGATGGAGGTGATGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATCGGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGAGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTGCGAGCTGGAGGAGGAAGTGGACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTGAAGAATATGGTGTTGCAGGACATCTCTAATCAACCGAAACAACAATCAACAACCCGTCC]
[+] EMBL BM606972 [CCGCCCACGCGTCCGCCCACGCGTCCGAACAGTTCGCACATGTTTGCAAGCCGTGCGGCAAAGGGTTCTTGATGGTGATCCGCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATTGCTTTTGTTTGTGTAATGTTTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTACAATCCTGCGTTATTAGTGTAAAACATTGCTTATTCCCGAAAGCAAGATGGAGGTGATGAAACAGAACGCTTCCGACAACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAATGAATGAGGCTGCAAGAGAATTTTTAAAAAATTATCCAGACTTCATTCCGATGTTAATCGGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGAGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTGCGAGCTGGAGGAGGAAGTGGACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTGAAGAATATGGTGTTGCAGGACATCTCTAATCAACCGAAACAACAATCAACAACCCGTCC]
consensusID : consensus_9329#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 596 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGAGACTTCATTCCGATGTTAATCGGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTGCGAGCTGGAGGAGGAAGTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTGAAGAATATGGTGCTGCAGGACATCTCTAATCAACCGAAACAACAATCAACAACCCGTCCACTACGAAAATGCAGGAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTCTGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTG]
[+] EMBL BM586100 [CCGCCCACGCGTCCGCCCACGCGTCCGAGACTTCATTCCGATGTTAATCGGTCAATCGCCTTACAAAATTGATCTGAGGTCGCTTATCATGGAAGCCCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAAGCAAACGGGACTACCTGCGAGCTGGAGGAGGAAGTGTACCTGCAGCCAAAGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCTGTGGATGTTGCAGCAGAGCTGAAGAATATGGTGCTGCAGGACATCTCTAATCAACCGAAACAACAATCAACAACCCGTCCACTACGAAAATGCAGGAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCTGTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCGGCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTACGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTCTGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTG]
[+] EMBL BX615310 [ GCTGCAGGACATCTCTAATCAACCGAAACAACAATCAACAACCCGTCCACTACGAAAAGGCAGGAACAAAAGTACCGGCGAGCTGGATCACTGTGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9329#1 ------------------------------------------------------------
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 CTCAGGCAAGAATTGCCCAGGTTTTATGCAGAGCTGAAGAATATGGTGCTGCAGTGACAT 60
consensus_9329#1 ------------------------------------------------------------
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 CTCTAATCAACCGAAACAACAATCAACAAGCCCGTACATTACGGAAGTGCAGAAACAAAA 120
consensus_9329#1 ------------------------------------------------------------
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 GTACCTGCGAGCTGGATCACTGTGTGTTCTTGTTTCAACAATAAGTGCTGGACCTGGGAG 180
consensus_9329#1 --------------------------------------------AAGAATCGGCNGAGGC 16
consensus_9329#2 --------------------------------------CCGCCCACGCGTCCGCCCACGC 22
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 TGTATACGAGAGCCATCGATGCAAGGGATGAGTGCCTGGCAACTGTAACCTGTCCGGTGT 240
consensus_9329#1 TGCACAAACAGTTCGCACATGTTTGCAAGCCGTGCAGCAAAGGGTTTCTGATGGTGATCC 76
consensus_9329#2 -GTCCGAACAGTTCGCACATGTTTGCAAGCCGTGCGGCAAAGGGTTCTTGATGGTGATCC 81
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 TTGCCAAACCATTCGTATGCATT---GCGCTGCAAAGCAACCGGTACCGAAATGCCACAC 297
consensus_9329#1 GCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATCGCTTTTGTTTGTGTAA-TGT 135
consensus_9329#2 GCAGTGTTTGGTCAGCTTTTTAATGTGTTTTCGCTTAATTGCTTTTGTTTGTGTAA-TGT 140
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 ACGACTGGCAAAAATATTTTGTACCCGTCATGG---AAAAGCCCTGGTTAATTCAACTGC 354
consensus_9329#1 TTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTATAATCCTGCGTTACTAGT 195
consensus_9329#2 TTTGTCGGTATAATTTTTATGCATTGTTACAAATGAAATGTACAATCCTGCGTTATTAGT 200
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 CCNGTGCACGTGATTT---GGTCTTGGCCAAATTGTGANGCTTACTCGTGCCGTGNNAC- 410
consensus_9329#1 GTAAAACATTGCTAATTCCCGAAAGCAAGATGGAGGTGACGAAACAGAACGCTTCCGACA 255
consensus_9329#2 GTAAAACATTGCTTATTCCCGAAAGCAAGATGGAGGTGATGAAACAGAACGCTTCCGACA 260
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 -TAAAGGATTAACACCTGGTTACAGTGTGTTGTAATTGTAACCTTGCAGCAGCTGGAGAT 469
consensus_9329#1 ACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAA 315
consensus_9329#2 ACAAGACCACGGAAGCATTGTGGAAACTAATACTCGCTCCATACGGTTGGAACGAGCAAA 320
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 CCAATCTCCTCGCGCCTTGGTTCCACACGCGANGTGCCCAATCAGGTTCCATTACGTAAG 529
consensus_9329#1 TGAATGAGGCTGCAAGAGA--ATTTTTAAAAAATTATCCAGACTTCAT------TCCGAT 367
consensus_9329#2 TGAATGAGGCTGCAAGAGA--ATTTTTAAAAAATTATCCAGACTTCAT------TCCGAT 372
consensus_9329#3 ---------CCGCCCACGC--GTCCGCCCACGCGT-CCGAGACTTCAT------TCCGAT 42
consensus_9329#0 CAAGCTGTGCCTTAAGATCCCGTATATTGTCAGTGTACCAGNAGTCGTATACAGTTCGAT 589
* * * ** ** * * ****
consensus_9329#1 GTTAATCGGTCAATCGC-CTTACAAAATTGATCTGAGGTC--GCTTATCAT---GGAAGC 421
consensus_9329#2 GTTAATCGGTCAATCGC-CTTACAAAATTGATCTGAGGTC--GCTTATCAT---GGAAGC 426
consensus_9329#3 GTTAATCGGTCAATCGC-CTTACAAAATTGATCTGAGGTC--GCTTATCAT---GGAAGC 96
consensus_9329#0 ATATTATGNATTGTCGCTCNTAANNTTTTAAACCGTNGTTTAACCCAACAGCCAGCAATT 649
* * **** * ** ** * * * ** * * ** * **
consensus_9329#1 CCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAA-GCAA 480
consensus_9329#2 CCGCGAGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAA-GCAA 485
consensus_9329#3 CCGCGCGAACAAGTGGCACAATACGACGTTAGATGAAATTCGTGAAGATTTTGAA-GCAA 155
consensus_9329#0 CCCCCAAAAAAAGGGCCTCCCTTGGTTGAAGGACCCTATTCCACAACGTCCCACNCACCA 709
** * ** *** * * * * * * ** **** ** * * *
consensus_9329#1 ACGGGACTACCTGCGAG------CTGGAGG---------AGGAAGTGTACCTGCAGCCAA 525
consensus_9329#2 ACGGGACTACCTGCGAG------CTGGAGG---------AGGAAGTGGACCTGCAGCCAA 530
consensus_9329#3 ACGGGACTACCTGCGAG------CTGGAGG---------AGGAAGTGTACCTGCAGCCAA 200
consensus_9329#0 ACGATGCCGTACGCGTTACATTCCTCACNGTTTACCTTCAGGAAAAACCTTGGCGATNGG 769
*** * *** ** * ***** **
consensus_9329#1 AGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCT---GTGGATGTTGCAGCAG 582
consensus_9329#2 AGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCT---GTGGATGTTGCAGCAG 587
consensus_9329#3 AGCACGCGCCGGAAATGGACGGAAGCGAACTGATGGAAGCT---GTGGATGTTGCAGCAG 257
consensus_9329#0 GGCGCCACCAGGAACCACACTGTGGCCTATGCACACACGCCAGAGNACANATTTAAGCCC 829
** * * **** ** * ** * * * ** * * ** ***
consensus_9329#1 AGCT-GAAGAATATGGTGCTGCAGGACATCTCTAAT--CAACCGAAACAACAATCAACAA 639
consensus_9329#2 AGCT-GAAGAATATGGTGTTGCAGGACATCTCTAAT--CAACCGAAACAACAATCAACAA 644
consensus_9329#3 AGCT-GAAGAATATGGTGCTGCAGGACATCTCTAAT--CAACCGAAACAACAATCAACAA 314
consensus_9329#0 GGTTTGCATNACATTTAGGTGNGNCCTTTNGGCNGTTCCCACGCNAAGGCCAANCAACTT 889
* * * * * ** * ** * * * ** ** *** ****
consensus_9329#1 CCCGTCCACTACGAAAATGCAGGAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCT 699
consensus_9329#2 CCCGTCC----------------------------------------------------- 651
consensus_9329#3 CCCGTCCACTACGAAAATGCAGGAACAAAAGTACCTGCGAGCTGGATCACTGTGTGTTCT 374
consensus_9329#0 CGCGTTNGGGACGACACGGCGCCATTATTTGCACACCACGGAACTTACGTTTAACTTTAC 949
* ***
consensus_9329#1 GTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCG 759
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 GTTTCAACAATAAGGCGGACCGGGAGGTATACGAGAGCCATCGATGCAAGGATGAGGCCG 434
consensus_9329#0 TCGTCAAGCATTTCGTNAACGCGCGTGGAACAACAGCCGACACGACTTGGTACAAACACC 1009
consensus_9329#1 GCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTA 819
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 GCAACGTAACCTGTCCGGTGTTGCAAACATTCGTATGCATGCGCTGCAAAGCAACCGGTA 494
consensus_9329#0 CCATTTTATACACGATTTGCCCGACGGGNCACACTTGGCAACACCTTTCACAACGTNATN 1069
consensus_9329#1 CGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTC 879
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 CGAAAGCACACACCGCCAAATATTGTCCGTTGAAGCCGGTTATCACGCCGGAGGATTGTC 554
consensus_9329#0 GNATANTGGGAGGCCACCCACAACTTCCCCGGCGAACAATNGATTTCCGACACAGACGCT 1129
consensus_9329#1 TGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTGTATGTACTGCGAGCGAGA 939
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 TGGCAATGGAGCTACGGCGGCATAAGATACACCGTAAGGGTG------------------ 596
consensus_9329#0 TAAAAGACTGCCTCGTGCCTTAAAGANCAGGGCCTACAGAGGGTAGANTTAAAACGTAAC 1189
consensus_9329#1 TCAATCTCTCGGCTGGTTCAAGCAGTGCCATAGTTCATGCTAAGAAGCGGCTAGTCCGTT 999
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 AACGCTGTTGGGGANAANCGCACACAAGCAAGTATNCCCTGNCCAACTCTCCCCTTTTTC 1249
consensus_9329#1 TGTAGGACAGAGTCGTTCGTTCATTTTATTTTATTACTTTACAACACATCCAAAGCTCTG 1059
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 ATCAACACACNCNCAAAGTCGTGGACCACTTTGGGAACATTCNCCAGNTCCCCCNCCAAA 1309
consensus_9329#1 TGAGCTTCAAGCAACAGGTAGTAGCTAATATCGGAACTGGTGGGCAAGAAAGGTTGCAGC 1119
consensus_9329#2 ------------------------------------------------------------
consensus_9329#3 ------------------------------------------------------------
consensus_9329#0 GCACTGGAGTTATGTCCGGAGCAACAACACCCACAATTTTGCTAGGGCGCCGCAAACCCG 1369
consensus_9329#1 AAATACGTTTCTGCTGCTCAGA------ 1141
consensus_9329#2 ----------------------------
consensus_9329#3 ----------------------------
consensus_9329#0 GTNTACNACGNATGGCANCTTTTNGGGT 1397
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||