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Anopheles gambiae
cluster # 9331 cluster # 9331       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9331#0 length = 1516 sequences # 14  
consensus_9331#1 length = 640 sequences # 1  
consensus_9331#2 length = 590 sequences # 1  

consensusID : consensus_9331#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1516
fasta sequence
                              [CCGATTTTGTGCGCCACTGTGCTGCTTTCGTTGGTG-T-CAGAAATCGTAATTCTCGTTCCGCGGCTCGTGTCTACGAATTCAGTGT-GTAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT-GGGGCCGC-AAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCA---CGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGG-TTGCCGGATGTGACGAAGCC--GGAGGGG-AAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCTACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCC-ATCCGGATC-TGCGGCTGCGGGG-CCA-CCAGAAGGAGGGCTATGGGC-TGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCT-GCCTATGGGACATCA-ATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTGGCCTGGCATCTGCTGCAC-GAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAG-CTGATGATATGGGACACGCGGTGCAACAACACCTC-GAAACCGT-CGCACACGGTCGATGCGCACACG-GCCGAGGTGAACTGCCTC-AGCTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACGGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACCGGGGACGAAATTTTCCAGGTACAGTGGTCGCCGCACAACGAAACGATTCTCGCGTCGTCCGGCACCGATCGGCGATTGCACGTGTGGGATCT]

[+] EMBL BM626039             [CCGATTTTGTGCGCCACTGTGCTGCTTTCGTTGGTGAA CAGAAATCGTAATTCTCGTTCCGCGGCTCGTGTCTACGTATTCGGTGTCCAAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACTGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT GGGGCCGCAAAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCA   CGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGG TTGCCGGATGTGACGAAGCC  GGAGGGG AAGGATTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08RIZ             [                        ccTTCGTTGGTG TACAGAAATCGTAATTCTCGTTCCGCGGCTCGTGTCTACGAATTAAGTGT GTAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT GGGGCCGC AAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCACGGCGGCAGGCAGCAACCCTTTCCTTTCCCGATTGGAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCTTTTGAACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCAAAAAGCCCTCATTAACTGCCCAGTGG TTGCCGGATGTGACGAAGCC  GGAGGGG AAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS08RIX             [                                  TG T CAGAAATCGTAATTCTCGTTCCGCGGCTCGTGTCTACGAATTAAGTGT GTAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT GGGGCCGC AAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCACGGCGGCAGGCAGCAACCCTTTCCTTTCCCGATTGGAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCTTTTGAACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCAAAAAAAGCCCTCATTAACTGCCCAGTGG TTGCCGGATGTGACGAAGCC  GGAGGGG AAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTTATCGCTACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCGGGAACCGAGCGGTGAGTTCC ATCCGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM576212             [                                   ccg CAGAAATCGTAATTCTCGTTCCGCGGCTCGTGTCTACGTATTCGGTGTCCAAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACTGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT GGGGCCGCAAAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCA   CGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGGATTGCCGGATGTGACGAAGCCCGGGAGGGGAAAGGATTACTCGGGGCATCGGCTCATCCTCGGCACGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM613634             [                                                      cCGTTCCGCGGCTCGTGTCTACGAATTCAGTGT GTAAAACACATTGCACAAAGTGTCCCTAACCGCCTGCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTT GGGGCCGC AAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCCGCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAAAAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCA   CGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGGCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGG TTGCCGGATGTGACGAAGCC  GGAGGGG AAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09GKZ             [                                                                                                                                       AACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGGTTGGGGGCCGC AAAAAAAAATTGCTATCGGCATTTTGGCTCCGTGAACTGCCGTGAACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08RJ0             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CATCGGACGAGCAGAACCCTCTGCTGATTGCGAGCGTGCCGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTTTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCTACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCCTATCCGGATC TGCGGCTGCGGGGCCCC CCAGAAGGAGGGCTTTGGGC TGTCGTGGAACCCGAACCTGAACGGCTTTCTGCTATCGGCCAGCGACGACCATACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AL694809             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      aggttAAACATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGACGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGG CCGCTACATGCCACAGAACCCGTGCGTTATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCAACCGAACAAGCCGGAACCGAGCGGTGAGTGGC ATCCGGATCTTGNGGCTTGGGGG CCACCCAAAAGGAGGGCTATGGGCTTGTCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08RIY             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAAAAGGGCGAGTTTGGCGGGTTCGGGTCGGTTTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCTACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTAAACAAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCC ATCCGGATC TGCGGCTGCGGGG CCA CCAGAAGGAGGGCTATGGGC TGTCGTGGAACCCGAACCTGAACGGCTTTCTGCTATCGGCCAGCGACGACCATACGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM587430             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCGGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCC ATCCGGATC TGCGGCTGCGGGG CCA CCAGAAGGAGGGCTACGGGC TGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCT GCCTGTGGGACATCA ATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTGGCCTGGCATCTGCTGCAC GAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAG CTGATGATATGGGACACGCGGTGCAACAACACCTC GAAACCGT CGCACACGGTCGATGCGCACACG GCCGAGGTGAACTGCCTC AGCTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACGGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACCGGGGACGAAATTTTCCAGGTACAGTG                                                                  ]
[+] EMBL BX625681             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCC ATCCGGATC TGCGGCTGCGGGG CCA CCAGAAGGAGGGCTACGGGC TGTCGTGGAATCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCT GCCTATGGGACATCA ATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTAGCCTGGCATCTGCTGCAC GAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAG CTGATGATATGGGACACGCGGTGCAACAACACCTC GAAACCGT CGCACACGGTCGATGCGCACACG GCCGAGGTGAACTGTCTC AGCTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACGGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACC GGGACGAAATTTTCCAGGTACAGTGGTCGCCGCACAACGAAACGATTCTCGCGTCGTCCGGCACCGATCGGCGATTGCACGTGTGGGATCT]
[+] EMBL BM594052             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgGAGCGGTGAGTGCC ATCCGGATC TGCGGCTGCGGGG CCA CCAGAAGGAGGGCTACGGGC TGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCT GCCTGTGGGACATCA ATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTGGCCTGGCATCTGCTGCAC GAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAG CTGATGATATGGGACACGCGGTGCAACAACACCTC GAAACCGT CGCACACGGTCGATGCGCACACG GCCGAGGTGAACTGCCTC AGCTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACAGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACCGGGGACGAAATTTTCCAGGTACAGTGGTCGCCGCACA                                                       ]
[+] EMBL BX619765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           aattCCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCTGGCCTATGGGACATCANATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTAGCCTGGCATCTGCTGCACGGAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAGNCTGATGATATGGGACACGCGGTGCAACAACACCTCGGAAACCGTGNGCACACGGTCGATGCGCACACGTGCCGAGGTGAACTGTCTCNAGCTTC ACCCGTACTCGGATTT                                                                                                                                                                                     ]
[+] EMBL BX605011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCT GCCTATGGGACATCA ATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCC                                                                                                                                                                                                                                                                                                                                                                                   ]


>consensus_9331#0 CCGATTTTGTGCGCCACTGTGCTGCTTTCGTTGGTGTCAGAAATCGTAATTCTCGTTCCG CGGCTCGTGTCTACGAATTCAGTGTGTAAAACACATTGCACAAAGTGTCCCTAACCGCCT GCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGG TTGGGGCCGCAAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCC GCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAA AAGAGAAGCAGGAACGATTTGGCACAAAACCGGCCGGATTCGCACGGCAGGCAGCAACCC TTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAG ACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGC TGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGAGTACAA AATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTG GCCCTCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGATTACTC GGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGC GAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAA GGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAA CCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCTAC TAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGA ACCGAGCGGTGAGTGCCATCCGGATCTGCGGCTGCGGGGCCACCAGAAGGAGGGCTATGG GCTGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGAT CTGCCTATGGGACATCAATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACAT CTTCACCGGCCACACGGCCGTGGTGGAGGATGTGGCCTGGCATCTGCTGCACGAGTCGCT GTTCGGGTCGGTGGCGGACGATCAGAAGCTGATGATATGGGACACGCGGTGCAACAACAC CTCGAAACCGTCGCACACGGTCGATGCGCACACGGCCGAGGTGAACTGCCTCAGCTTCAA CCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACGGTGGCGCTGTGGGA TCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACCGGGGACGAAATTTTCC AGGTACAGTGGTCGCCGCACAACGAAACGATTCTCGCGTCGTCCGGCACCGATCGGCGAT TGCACGTGTGGGATCT



consensusID : consensus_9331#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 640
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGGGCCGGATTCGCACGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGC]

[+] EMBL BM603849             [CCGCCCACGCGTCCGCCCACGCGTCCGGGCCGGATTCGCACGGCAGGCAGCAACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGATGGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGAGTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCCTCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGATTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCACGAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGC]


>consensus_9331#1 CCGCCCACGCGTCCGCCCACGCGTCCGGGCCGGATTCGCACGGCAGGCAGCAACCCTTTC CTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGGACAGACCA TTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATCGAGCTGAT GGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGAGTACAAAATC TGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCTCGAGTGGCCC TCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGATTACTCGGTG CATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCTGATTGCGAGC GTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAACGAGAAGGGC GAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAAGATTAACCAC GAGGGCGAGGTTAATCGGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAA ACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGC



consensusID : consensus_9331#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 590
fasta sequence
                              [CCGCCCACGCGTCCGGAGGGCGAGGTTAATCTGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCCATCCGGATCTGCGGCTGCGGGGCCACCACAAGGAGGGCTACGGGCTGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCTGCCTGTGGGACATCAATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCACGTGGTGGAGGATGTGGTCTGGCATCTGCTGCACGAGTCGCTGTTCGGGTCGGTGGCGGACGATCAAAAGCTGATGATATGGGACACGCGGTGCAACAACACCTCGAAACCGTCTCACACGGTCGATGCGCACACGGGCGAGGTGAACTGCCTCAACTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACCAAACGGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAAT]

[+] EMBL BM577746             [CCGCCCACGCGTCCGGAGGGCGAGGTTAATCTGGCCCGCTACATGCCACAGAACCCGTGCGTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGCAAGCCGGAACCGAGCGGTGAGTGCCATCCGGATCTGCGGCTGCGGGGCCACCACAAGGAGGGCTACGGGCTGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGACCATACGATCTGCCTGTGGGACATCAATGCGACGCCGAAGGAGCACCGGTTGATCGACGCGAAGAACATCTTCACCGGCCACACGGCACGTGGTGGAGGATGTGGTCTGGCATCTGCTGCACGAGTCGCTGTTCGGGTCGGTGGCGGACGATCAAAAGCTGATGATATGGGACACGCGGTGCAACAACACCTCGAAACCGTCTCACACGGTCGATGCGCACACGGGCGAGGTGAACTGCCTCAACTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACCAAACGGTGGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAAT]


>consensus_9331#2 CCGCCCACGCGTCCGGAGGGCGAGGTTAATCTGGCCCGCTACATGCCACAGAACCCGTGC GTAATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCG AGCAAGCCGGAACCGAGCGGTGAGTGCCATCCGGATCTGCGGCTGCGGGGCCACCACAAG GAGGGCTACGGGCTGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGAC GACCATACGATCTGCCTGTGGGACATCAATGCGACGCCGAAGGAGCACCGGTTGATCGAC GCGAAGAACATCTTCACCGGCCACACGGCACGTGGTGGAGGATGTGGTCTGGCATCTGCT GCACGAGTCGCTGTTCGGGTCGGTGGCGGACGATCAAAAGCTGATGATATGGGACACGCG GTGCAACAACACCTCGAAACCGTCTCACACGGTCGATGCGCACACGGGCGAGGTGAACTG CCTCAACTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACCAAACGGT GGCGCTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9331#0      CCGATTTTGTGCGCCACTGTGCTGCTTTCGTTGGTGTCAGAAATCGTAATTCTCGTTCCG 60
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      CGGCTCGTGTCTACGAATTCAGTGTGTAAAACACATTGCACAAAGTGTCCCTAACCGCCT 120
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      GCAATAGCTTTAAACAGCACGGCTTTGTCGTTGGCGTGTGCCACTGGAGAGAGTTGCCGG 180
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      TTGGGGCCGCAAAAAAAAATTGCAATCGGCATTTTGGCTCCGTGAACTGCCGTGAACGCC 240
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      GCTTTGACAAACGTACGCACACATACATACAGAGAGACGCGCGCGCACGTAGCGTCGGAA 300
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      AAGAGAAGCAGGAACGATTTGGCACAAAACCGG----CCGGATTCGCACGGCAGGCAGCA 356
consensus_9331#1      -----CCGCCCACGCGTCCGCCCACGCGTCCGGG---CCGGATTCGCACGGCAGGCAGCA 52
consensus_9331#2      -----------------CCGCCCACGCGTCCGGAGGGCGAGGTTAATCTGGCCCGCTACA 43
                                            ***    ****    *  * **     ***  **  **

consensus_9331#0      ACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGG 416
consensus_9331#1      ACCCTTTCCTTTCCCGATTGCAAGCCTAACGGAATTTGGCGGGAGTGTGTGGTGCTGCGG 112
consensus_9331#2      TGCCA--CAGAACCCGTGCGTAATCGCAACTAAAAC--GCCGTCGAGCGATGTGCTCGTG 99
                        **   *    ****   * ** *  ***  **    ** *  * * *  *****   *

consensus_9331#0      ACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATC 476
consensus_9331#1      ACAGACCATTTGGACCTTTCCCGACCGCTACTAATCAGAAGAAAAGCAAAATGGGTGATC 172
consensus_9331#2      TTCGACTACACGAAGCA--CCCGAGC------AAGCCGGAACCGAGCGGTGAGTGCCATC 151
                         *** *   * * *   ***** *      ** * * *    ***     * *  ***

consensus_9331#0      --GAGCTGATGGTGCGGAAGCTTTTGACGATGCGGTCGAGGAGCGCGTCATTAATGAGGA 534
consensus_9331#1      --GAGCTGATGGTGCGGAAGCTTTCGACGATGCGGTCGAGGAGCGCGTCATCAATGAGGA 230
consensus_9331#2      CGGATCTGCGGCTGCGGGGCCACC--ACAAGGAGGGCTACGGGC-TGTCGT------GGA 202
                        ** ***  * *****   *     ** * * ** * * * **  *** *      ***

consensus_9331#0      GTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCT 594
consensus_9331#1      GTACAAAATCTGGAAGAAAAACACGCCCTTCCTGTACGACCTGGTCATGACACACGCGCT 290
consensus_9331#2      ACCCGAA--CCTGAACGGCTATCTGCTATCGGCCAGCGAC--GACCAT-ACG-ATCTGCC 256
                         * **  *  ***     *   **  *       ****  *  *** **  *   ** 

consensus_9331#0      CGAGTGGCCCTCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGA 654
consensus_9331#1      CGAGTGGCCCTCACTAACTGCCCAGTGGTTGCCGGATGTGACGAAGCCGGAGGGGAAGGA 350
consensus_9331#2      TGTGGGACATCAATGCGACGCCGAAGGAGCACCGGTTG-ATCGACGC--GAAGAACATCT 313
                       * * * *    *      *** *  *    **** **   *** **  ** *   *   

consensus_9331#0      TTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCT 714
consensus_9331#1      TTACTCGGTGCATCGGCTCATCCTCGGCACGCACACATCGGACGAGCAGAACCATCTGCT 410
consensus_9331#2      TCACCGGCCACA-CGGCACGTGGTGGAGGATGTGGTCTGGCATCTGCTGCACGAGTCGCT 372
                      * **  *   ** **** * *  * *           * * *   ** * ** *   ***

consensus_9331#0      GATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAA 774
consensus_9331#1      GATTGCGAGCGTGCAGCTGCCGAACGAGGATGCCCAGTTCGATACGGGCCACTACGACAA 470
consensus_9331#2      G--TTCGGGTCGGTGGCGGACGATCAAAAGCTGATGATATGGGACACGCGG-TGCAACAA 429
                      *  * ** *   *  ** * *** * *          *  *  **  **   * * ****

consensus_9331#0      CGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAA 834
consensus_9331#1      CGAGAAGGGCGAGTTTGGCGGGTTCGGGTCGGTGTCGGGCAAGATCGAGATCGAGATCAA 530
consensus_9331#2      CACCTCGAAACCGTCTCACACGGTCGATGCGCACACGGGCGAGGT---GAACTGCCTCAA 486
                      *     *     ** *  *  * ***   **    ***** ** *   ** *    ****

consensus_9331#0      GATTAACCACGAGGGCGAGGTTAATCGGGC--CCGCTACATGCCACAGAACCCGTGCGTA 892
consensus_9331#1      GATTAACCACGAGGGCGAGGTTAATCGGGC--CCGCTACATGCCACAGAACCCGTGCGTA 588
consensus_9331#2      CTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACCAAACGGTGGCGCT 546
                        * ****   *    *** * * ** ***  * * * *   * **  ***    ***  

consensus_9331#0      ATCGCTACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGCACCCGAGC 952
consensus_9331#1      ATCGCAACTAAAACGCCGTCGAGCGATGTGCTCGTGTTCGACTACACGAAGC-------- 640
consensus_9331#2      GTGGGATCT---GCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAAT------------- 590
                       * *   **    ***  **    * **         ***     *              

consensus_9331#0      AAGCCGGAACCGAGCGGTGAGTGCCATCCGGATCTGCGGCTGCGGGGCCACCAGAAGGAG 1012
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      GGCTATGGGCTGTCGTGGAACCCGAACCTGAACGGCTATCTGCTATCGGCCAGCGACGAC 1072
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      CATACGATCTGCCTATGGGACATCAATGCGACGCCGAAGGAGCACCGGTTGATCGACGCG 1132
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      AAGAACATCTTCACCGGCCACACGGCCGTGGTGGAGGATGTGGCCTGGCATCTGCTGCAC 1192
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      GAGTCGCTGTTCGGGTCGGTGGCGGACGATCAGAAGCTGATGATATGGGACACGCGGTGC 1252
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      AACAACACCTCGAAACCGTCGCACACGGTCGATGCGCACACGGCCGAGGTGAACTGCCTC 1312
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      AGCTTCAACCCGTACTCGGAGTTCATTCTGGCGACGGGTTCGGCCGACAAAACGGTGGCG 1372
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      CTGTGGGATCTGCGCAATCTGAAGCTGAAGCTCCACTCGTTCGAATCGCACCGGGGACGA 1432
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      AATTTTCCAGGTACAGTGGTCGCCGCACAACGAAACGATTCTCGCGTCGTCCGGCACCGA 1492
consensus_9331#1      ------------------------------------------------------------
consensus_9331#2      ------------------------------------------------------------
                                                                                  

consensus_9331#0      TCGGCGATTGCACGTGTGGGATCT 1516
consensus_9331#1      ------------------------
consensus_9331#2      ------------------------
                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)