These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9356#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1513 fasta sequence [CCGGGCCAGTCCACAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT---GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC-TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAGTGCTG] [+] EMBL BM601121 [CCGGGCCAGTCCACAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCA ] [+] EMBL BM609255 [ CCGGTCCACAGCGTTCTGTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTTTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCTGATGGTGAGTCGGATGATGATGAGGAGGTGAGCGATAGCGAAGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTGAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGA ] [+] EMBL BX605619 [ AGTCCACAGCGTTCTCTTCAGGGTTTTGAACTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAGTCCGCCTACATTATGTTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCCCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGTCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAA ] [+] EMBL BM596149 [ CCGCAGCGTTCTCTTCAGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTG ] [+] EMBL CNS092X6 [ GCGTTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGC ] [+] EMBL CNS08O9F [ CAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTTCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGAAGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGAATTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGA ] [+] EMBL BM589201 [ ccgGGGTTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGCAAGTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGAC GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTGGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCC ] [+] EMBL BX607413 [ AACTGCATGTGTGTCGATTTTACGAATAGTAAGCAAAAAAGTAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCT GGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGCTGGTGTGCGACGAGTCCGCCTACATTATGTTGCACCAGGCACATACCGGAGCACCCTGCCTCAGCTTCGACATTGTGAGCGATCCGCTCGGCGATGATCGGGAAACGTTCCCCCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCCCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGTCGACGGTGAGTCCGACGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCAACGGGCGACTGTCGGCGTGACATTCACATC ] [+] EMBL BX626945 [ GATGAGGATCTGGAGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAACAGCGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGATGGTGAGTCCGATGACGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGTTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGTGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAANGAANGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGGGCGACTGTCNGCGTGATATTCACATCTGGCGCCCGAACGACAANGGCGCGTGGATTGTGGACCANCGGCCGCTCG ] [-] EMBL CNS092X7 [ GTAACCCGGTTGCGTGTGTCCACGTTCGGCAGC TCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAAGGTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTC GGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAG ] [-] EMBL CNS09OQX [ GGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTAACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAAGGTTCGCGATCAACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGAAATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGCCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGAACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGAACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAGTGCTG] [-] EMBL CNS08O9G [ TGGACCAGCGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCCGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGAACTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTTCCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGcgcg ] [-] EMBL AGA282262 [ GGTGGCGATGACGGTGTGCTGCAGATATGGAATCTGCGTCAGTTCCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGAGTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCTGTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAAGGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCACTGGCATCCGCAGCTGAAGGGTGTGATACTGGGCACGGCACACAGCGGGTT ] consensusID : consensus_9356#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 928 fasta sequence [TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGCGGCCGCTCGTGGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGGTGGCAACGTTTAAGCACCACACC] [+] EMBL CNS09OQW [TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCAAGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGAGGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGATCGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCACATCTGGCGCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGCGGCCGCTCGTGGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCCTGCATGCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGAAAACACCGGGTGGCAACGTTTAAGCACCACACC] consensusID : consensus_9356#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 801 fasta sequence [CCCCGCNGGTTAAGCTGGCGGCATCGACGATAGCAGGTGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGTGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCTGGCGCCCGAACGACAAGGGCGCGTGGATTGTGGACCAGCTGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGCAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGATCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAATGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAACAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCCAAGGNAACAACANGGGGTCA] [+] EMBL AL692291 [CCCCGCNGGTTAAGCTGGCGGCATCGACGATAGCAGGTGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGTGCTTCGCGATCGACTGGTGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCTGGCGCCCGAACGACAAGGGCGCGTGGATTGTGGACCAGCTGGCCGCTCGTGGGACACACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGAACCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATCTGCGTCAGTTCCAGTCGCAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGATCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAATGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAACAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCCAAGGNAACAACANGGGGTCA] consensusID : consensus_9356#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence [CCGCCCACGCGTCCGAGCGTTCTCTTCGGGGGGTTTCAATTGAAAGTGTGCCGATTTTACGAATAGTAAGCAAAAAAGCAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAATAGTGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC] [+] EMBL BM657543 [CCGCCCACGCGTCCGAGCGTTCTCTTCGGGGGGTTTCAATTGAAAGTGTGCCGATTTTACGAATAGTAAGCAAAAAAGCAACTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCGAGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGCTGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCCTCAGCTTCGACATTGTAAGCGATCCGCTCGGTGATGATCGGGAAACGTTCCCTCTGACGGCGTATGTCGTCGCCGGTACGCAAGCGGCTCGTACGCACGTGAATAGTGTGATCGTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGACGATGACGAGGAGGTGAGCGATAGCGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 TTCTCTTCAGGGGTTTGAATTGCAAGTGTGTCGATTTTACGAATAGTAGGCAAAAAAGCA 60 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 AGTCTACTCACCATGTCGGAACCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATC 120 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 GAGGACGCCGATCTGGAAAATGCAAGCGCACGGGGACGACGATGATGAGGATCTGGAGGA 180 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 GAAGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGACGAGGA 240 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 GGTGAGCGATAACGAGGACGTGAACGAGGACCAAACGCCCATCCTGACGAGCGTGATGAT 300 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------------------------------ consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 CAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGGCAGCTCGCAGTACGT 360 consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ------------------------------------CCGGGCCAGTCCAC-AGCGTTCTC 23 consensus_9356#3 ------------------------------------CCGCCCACGCGTCCGAGCGTTCTC 24 consensus_9356#1 GGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAACGAACAGCTGGCGGC 420 consensus_9356#2 ------------------------------------CCCCGCNGGTTAA--GCTGGCGGC 22 * * * consensus_9356#0 TTCAGGGT-TTTGAAT-TGCAAGTGTGTCGATTTTACGAATAGTA--AGCAAAAAAGCAA 79 consensus_9356#3 TTCGGGGGGTTTCAAT-TGAAAGTGTGCCGATTTTACGAATAGTA--AGCAAAAAAGCAA 81 consensus_9356#1 CATCGACGATAGCAGGGCGCGCAAG-ACGTACCAGCAGAACAAGACCGGTGACGGGGTGA 479 consensus_9356#2 -ATCGACGATAGCAGG-TGCGCAAGTACGTACCAGCAGAACAAGACCGGTGACGGGGTGA 80 * * * * * * *** * * * * * * consensus_9356#0 GTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCG 139 consensus_9356#3 CTCTACTCACCATGTCGGAAGCCGACGAACAGATGGAGGTGGCCGAGGATCAAAACATCG 141 consensus_9356#1 AGCCAGATTTCACCTTTT---CCGGGCACCAGAAGGAAG-GCTTCGCGATCGAC---TGG 532 consensus_9356#2 AGCCAGATTTCACCTTTT---CCGGGCACCAGAAGGAAGTGCTTCGCGATCGAC---TGG 134 * * ** * *** * **** *** * * **** * * * consensus_9356#0 AGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGACGATGATGAGGATCTGGAGGAGA 199 consensus_9356#3 AGGACGCCGATCTGGAAAATGCAAGCGACGGGGACGATGATGATGAGGATCTGGAGGAGA 201 consensus_9356#1 TGTCCGACGACTCGTGGCATGCTAGCGACG-GGCGACTGTCGGC-GTGACATTCACATCT 590 consensus_9356#2 TGTCCGACGACGCGTGGCATGCTGGCGACGTGGCGACTGTCGGCTGTGATATTCACATCT 194 * ** *** * **** ****** ** * * ** * * consensus_9356#0 AGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGC 259 consensus_9356#3 AGGAGGATGGCAAGGCAAAGGTTTACCTACCCGGCGGTAAACTGTCCAACGATGAGGAGC 261 consensus_9356#1 GGC--GCCCGAACGACAAGGGCGCTTGGGAATGTGGACCAGC-GGCCGCTCGTGGGGA-- 645 consensus_9356#2 GGC--GCCCGAACGACAAGGGCGCGTGG-ATTGTGGACCAGCTGGCCGCTCGTGGG-A-- 248 * * * * * *** ** * * * * * ** ** * * consensus_9356#0 TGGTGTGCGACGAATCCGCCTACATTATGCTGCACCAGGCACATACCGGAGCACCCTGCC 319 consensus_9356#3 TGGTGTGCGACGAATCCGCGTACATTATGCTGCACCAGGCACATACCGGAGCGCCCTGCC 321 consensus_9356#1 -CACACG-GACTCGGTCGAAGATAT-ACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCC 702 consensus_9356#2 -CACACG-GACTCGGTCGAAGATAT-ACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCC 305 * *** ** * ** * ** * * * ** * ** * * *** consensus_9356#0 TCAGCTTCGACATTGTGAGCGATCCGC-TCGGCGATGATCGGGAAACGTTCCCCCTGACG 378 consensus_9356#3 TCAGCTTCGACATTGTAAGCGATCCGC-TCGGTGATGATCGGGAAACGTTCCCTCTGACG 380 consensus_9356#1 TCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCGCCAAAAGCC 762 consensus_9356#2 TCCTGCTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCC 365 ** *** * ******** * * ** ***** ** * * consensus_9356#0 GCGTATGTCGTCGCCGG-----TACGCAAGCGGCTCGTACGCACGTGAACAG-CGTGATC 432 consensus_9356#3 GCGTATGTCGTCGCCGG-----TACGCAAGCGGCTCGTACGCACGTGAATAG-TGTGATC 434 consensus_9356#1 -TGCATGCTGACGGCGGAG-AATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATC 820 consensus_9356#2 -TGCATGCTGACGGCGGAGCAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATC 424 * *** * ** *** * **** * * * * ** * ** * *** consensus_9356#0 GTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCCGAC 492 consensus_9356#3 GTAATGAAGATGGCCAATCTGACGCGCACCTCGAAACAGTCGGCCGACGGTGAGTCGGAC 494 consensus_9356#1 GTAACGAA--CCGCTCATCGCTAGTGGTGGCGATGACGG-TGTGCTGCAGATATGGGATC 877 consensus_9356#2 GTAACGAA--CCGCTCATCGCTAGTGGTGGCGATGACGGATGTGCTGCAGATATGGGATC 482 **** *** ** *** * * ** * * * * * * * consensus_9356#0 GACGACGAGG--AGGTGAGCGATAGCGA--GGACGTGAACGAGGACCAAACGCCCATCCT 548 consensus_9356#3 GATGACGAGG--AGGTGAGCGATAGCGA--GGACGTGAACGAGGACCAAACGCCCATCCT 550 consensus_9356#1 TGCGTCAGTTCCAGTCG-AAAACACCGGGTGGCAACGTTTAAGCACCACACC-------- 928 consensus_9356#2 TGCGTCAGTTCCAGTCGCAAAACACCGG-TGGCAACGTTTAAGCACCACACCGACCACAT 541 * * ** * * * ** ** * ** **** ** consensus_9356#0 GACGAGCGTGATGATCAAGCACCCCGGGTGCGTAAACCGGTTGCGTGTGTCCACGTTCGG 608 consensus_9356#3 GACGAGCGTGATGATCAAGCACCCTGGGTGCGTTAACCGGTTGCGTGTGTCC-------- 602 consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 AACGAACGTCGAGTGGCATCCGAAGGAATCGACATCCTGGCGTCAGGTGGTGACCGACGA 601 consensus_9356#0 CAGCTCGCAGTACGTGGCCTCGTGGAGCGAGATGGGCAAGGTGCACATTTACAACATCAA 668 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 TCAGATTGCCCTGTGGGGATCTTCCGNGGGAGAAGACCGCATGGGGACNCGNATGCGAAA 661 consensus_9356#0 CGAACAGCTGGCGGCCATCGACGATAGCAGGGCGCGCAAGACGTACCAGCAGAACAAGAC 728 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 TGACCGATCCCGAACTTGACAGGATCTTCCAACCCCAAGTGCTGTNCATCCACCAGGGAA 721 consensus_9356#0 CGGTGACGGGGTGAAGCCAGATTTCACCTTTTCCGGGCACCAGAAGGAAGGCTTCGCGAT 788 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 CAGAAGCGAGATCAANGAGCTTGGACTGGCATCCCGCACTGAAAGGGTGTGACACTGTCC 781 consensus_9356#0 CGACTGGTGTCCGACGACTCGTGGCATGCTAGCGACGGGCGACTGTCGGCGTGACATTCA 848 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 AAGGNAACAACANGGGGTCA---------------------------------------- 801 consensus_9356#0 CATCTGGCGCCCGAACGACAAGGGCGCTTGGAATGTGGACCAGCGGCCGCTCGTGGGACA 908 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 CACGGACTCGGTCGAAGATATACAGTGGAGCCCGAACGAAGCGAATGTGCTCGCCTCCTG 968 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 CTCGGTGGACAAATCGATCCGCATTTGGGACTGTCGGGCGGCGCCCGCCAAAGCCTGCAT 1028 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 GCTGACGGCGGAGAATGCGCACGAAAGCGATGTGAATGTAATTAGCTGGAATCGTAACGA 1088 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 ACCGCTCATCGCTAGTGGTGGCGATGACGGTGTGCTGCAGATATGGGATCTGCGTCAGTT 1148 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 CCAGTCGAAAACACCGGTGGCAACGTTTAAGCACCACACCGACCACATAACGACCGTCGA 1208 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 GTGGCATCCGAAGGAATCGACCATCCTGGCGTCCGGTGGTGACGACGATCAGATTGCCCT 1268 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 GTGGGATCTGTCCGTGGAGAAGGACGATGGGGACGATGCGAATGACGATCCGAACTTGAA 1328 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 GGATCTTCCACCCCAGCTGCTGTTCATCCACCAGGGACAGAGCGAGATCAAGGAGCTGCA 1388 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 CTGGCATCCGCAGCTGAAGGGTGTGATACTGTCCACGGCACACAGCGGGTTCAACGTTTT 1448 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 CCGTACGATAAGCGTTTAATGGCAATAGGAATACATTCACAGGAGCACAACGACGGTGAG 1508 consensus_9356#3 ------------------------------------------------------------ consensus_9356#1 ------------------------------------------------------------ consensus_9356#2 ------------------------------------------------------------ consensus_9356#0 TGCTG 1513 consensus_9356#3 ----- consensus_9356#1 ----- consensus_9356#2 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||