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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9362#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1862 fasta sequence
[CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCTTCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAAATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGACTGTTGCATCAACTTGTGCAAGAAGGACGTTG-----GTTCGC-AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG-GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC-GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA-CT-CCATTACAACACCTCGCTGCCG-GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG-AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC-CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCCACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGT-CAATATCGAA]
[+] EMBL BM594899 [CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCTTCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAAATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGACTGTTGCATCAACTTGTGCAAGAAGAACGTTGTTTCTTTTCTCAAAACAAAAATGATGAAAGTGTTGTGTTACACCATTAAAACAGCAAATACTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGTGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTTGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTACTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGCAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAA ]
[+] EMBL BM647838 [ ccggaTTGTGCAAGAAGGACGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCG ]
[+] EMBL BX627771 [ aggGCAAGAAGGAAGTTG ATTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATACTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACTCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTACTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGCAACACCGTCCACACCAGTGGCGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTC ]
[+] EMBL CNS096J4 [ AGGACGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGTGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGC GGGTTTGAGCTCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CTGCCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAA CCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTA CGTTAAGTACGAACTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGA ]
[+] EMBL BM646550 [ ccgGTTG GTTCGC AAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAAGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGC ]
[+] EMBL BX628003 [ AAAGTGTTGTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAANGTGCTGTACATTGCGGAGCACTATTT ]
[+] EMBL BX620170 [ CGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGCGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCAGCT CCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTA ]
[+] EMBL CNS08YS8 [ TTCACCCTAATCGGCG GTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCC GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTTCATTGCGGA CACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CT CCATTACAACACCTCGCTGCCG GTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAACCCGGCAC GATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGAAAAGTACGAGCTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCC ]
[+] EMBL CNS0979A [ TGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCCAAAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACG CGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAG ACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCA CT CCATTACAACACCTCGCTGCCGCGTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAA CCGGCAC GATGAAGCTGTGTACGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAA TCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGCATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCG ]
[-] EMBL CNS096J5 [ TCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAAT TGCGCACGAACCTAGTCGAGGTG AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCAC CCCGCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACAATGTACCTCATGAAGAAGGATTTCATGCCCCCACTCCGCTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGT CAATATCG ]
[-] EMBL CNS08YS9 [ GCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAACGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTGAAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCCC CCCCCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCATTTTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCAACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGTTGTCCAGCTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACATTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCATAATCAGTTGGTAAATAAACTATCAAATGCAACATGTGCAATATCAAA]
[-] EMBL CNS0979B [ aAATGTAAATCTGCGCACGAACCTAGTCGAGGTG AAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTGCACGTCACGCCCGCCGAT GGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCTAGTTACCGAGGTGGGCTTCGTAGACGTGAACAAGGATACGCTGCAGCATCAGAA TCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACAATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGGATGGGCCGGGACTGATGCGAAAGTTGATGCATTTCCGGCTGTAAGCGCAACGCGTTGAATGACCTGTCTGGTACATTGGTTTATTTTGCTCTTTGCTGTCCAACTTTTCGATATCGATCGAATAGGAATGAAGGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCCACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGATTTATCGTAAATGTGGTAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTGGTAAATAAACTATCAAATGCAACATGTg ]
consensusID : consensus_9362#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 819 fasta sequence
[CCAAGAATCGGCACGNTGGAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATAC-AATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCGAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGCAAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCTGTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAGAACGGGGCACATTTATTGTTACAATCTGGAGNCACG]
[+] EMBL BX467151 [CCAAGAATCGGCACGNTGGAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATAC AATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCGAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGCAAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCTGTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAGAACGGGGCACATTTATTGTTACAATCTGGAGNCACG]
[+] EMBL AL930189 [ TAAAAGTGTTGTGTTATACAAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGAT ]
consensusID : consensus_9362#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 535 fasta sequence
[ATCCCCCGAGGTTACTGCTGCACGTTACCCGCCCATTGGTGCCCGGATGTGCTGAAGGCTTGCAAAGCCTATTACCGAGGTGGGCTTCGTAACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGNATGCATTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGTACATTGGTTTATT]
[+] EMBL AL933454 [ATCCCCCGAGGTTACTGCTGCACGTTACCCGCCCATTGGTGCCCGGATGTGCTGAAGGCTTGCAAAGCCTATTACCGAGGTGGGCTTCGTAACGTGAACAAGGATACGCTGCAGCATCAGAAATTCAGCAACGTCTTTGCGATCGGTGACTGCTCATCTTCGCCGAATTCTAAAACAGCAGCGTCCGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGCACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACGTGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGAAACTTTCCCGCTCGATCAGCGCAAGGAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCGCTCTACTGGCATCTGCTGCTGAACGGTCTGTGGAATGGGCCGGGACTGATGCGAAAGTTGNATGCATTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGTACATTGGTTTATT]
consensusID : consensus_9362#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence
[GGCAGGAATCGGCNCGAGGTTGAATCTGCGCACGAACCCGTACNTCGAGGTGAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGGTACGAGCTGCTGCACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTACCGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCAACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANAGACCAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGGCGCCCAAGGGGTCNGGCGAGAAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACGTGGGGNCATTTGTCTGGAGATAGGACGAAGCGNGGGCNCCAGGGCAAACGAACCNCGTAAAGAAGTTCGCGGANCAGGGTTTGTGAGACAGAGAACCAACGTAG]
[+] EMBL BX468079 [GGCAGGAATCGGCNCGAGGTTGAATCTGCGCACGAACCCGTACNTCGAGGTGAAACCCGGCACGGATGAAGCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGGTACGAGCTGCTGCACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTACCGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCAACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANAGACCAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGGCGCCCAAGGGGTCNGGCGAGAAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACGTGGGGNCATTTGTCTGGAGATAGGACGAAGCGNGGGCNCCAGGGCAAACGAACCNCGTAAAGAAGTTCGCGGANCAGGGTTTGTGAGACAGAGAACCAACGTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CCGGTGTGTGTGTGTGTGCATGCTCGATGGTTGATAGTCCCATTCTTCCATCGTTTGGCT 60
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 TCGTTTCATTACTAAAACACAACCGCCCGGTACGGACGCTGGTACGTGTGTGCCCTTGAA 120
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 ATCACACTGAAACTCTGAAATTTGGTGACATTCAGTGGATTTTTATTGCCCGTGGACAGA 180
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CTGTTGCATCAACTTGTGCAAGAAGGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTT 240
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 GTGTTATACAATTAAAACAGCAAATTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAAC 300
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 AAGCGGCATTCTGAACGAAAACCACAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGG 360
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 AGGATGTTCCGTGGCGGCAAAAGCATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCT 420
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 GGAACCGGCTGATAACCACTATTATCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAA 480
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 AAAGCTGGAGGACAGCTTTCGCCCAATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGAT 540
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CAAGGATTCGGCCGCAAAGTTTGAGCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGA 600
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 TACAATCGAGTACGAATATTTGCTCGTTGCCGTCGGATTGCAGCTGAATTACGACAAAAT 660
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 TCCGGGCCTGCTGGAAGCCCTGTCGATACCGAACGGGAAGGTGTGCTCGAACTACTCGCC 720
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 GAAGTATGTCGACCGTACCTACCAGGCGCTGAAGAACTTCCGCACCGGCAACGCCGTGTT 780
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CACCTTCCCGAACAGTCCGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGC 840
consensus_9362#1 ----------------------------------------CCAAGAATCGGCACGNTGGA 20
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 GGAGCACTATTTACGCAAGTCCAGAAAGCGCAAAAATGCGCACTCCATTACAACACCTCG 900
consensus_9362#1 GGACGTTGGTTCGCAAACAAAAATGATAAAAGTGTTGTGTTATACAATTAAAACAGCAAA 80
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CTGCCGGTGCTGTTCGGCGTAAAGCACTATGCCGATGCGCTCTGGGAAATAGTGAAGAAA 960
consensus_9362#1 TTCTCCGCTTAGTATTGCGGCAAGAGGATTCGCAACAAGCGGCATTCTGAACGAAAACCA 140
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 CGGGACATTAATGTAAATCTGCGCACGAACCTAGTCGAGGTGAAACCCGGCACGGATGAA 1020
consensus_9362#1 CAAATGTAAACTGTTAGTGGTTGGTGGGGGCGCCGGAGGATGTTCCGTGGCGGCAAAAGC 200
consensus_9362#2 ---------------------------------------ATCC-CCCGAGGTTACTGCTG 20
consensus_9362#3 --------------------------------GGCAGGAATCGGCNCGAGGTTGAATCTG 28
consensus_9362#0 GCTGTGTTCGAAAATCTCGACAAGCCGGACGAGCGGTTTACCGTTAAGTACGAGCTGCTG 1080
consensus_9362#1 ATCCAACAAGCTGGGGGCCGGAAAAGTGATTGTGCTGGAACCGGCTGATAACCACTATTA 260
* * *
consensus_9362#2 CACGTTA--------CCCGCCCATTGGTGCCC-GGATGTGCTGAAGGCTTGC--AAAGCC 69
consensus_9362#3 CGCACGAA-------CCCGTACNTCGAGGT----GAAACCCGGCACGGATG---AAGCTG 74
consensus_9362#0 CACGTCAC-------CCCGCCGATGGGTGCCCCGGATGTGCTGAAGGCTTGCAAAAGCCT 1133
consensus_9362#1 TCAGCCGATGTTCACCCTAATCGGCGGTGGCATTAAAAAGCTGGAGGACAGCTTTCGCCC 320
** * * * * * * * *
consensus_9362#2 TATTACCGAGGTGGGCTTCGTAA-CGTGA-ACAAGGATACGCTGCAGCATCAGAAATTCA 127
consensus_9362#3 TGTTCGAAAATCTCGACAAGCCG-GACGA-GCGGTTTACCGTTAAGGTACGAGCTGCTGC 132
consensus_9362#0 AGTTACCGAGGTGGGCTTCGTAGACGTGA-ACAAGGATACGCTGCAGCATCAGAAATTCA 1192
consensus_9362#1 AATGAAGAGCGTTCTGCCCGCGCTGGCCACGTGGATCAAGGATTCGGCCGCAAAGTTTGA 380
* * * * * * * *
consensus_9362#2 GCAACGTCTTTGCGATCGGTGACT-GCTCATCTTCGCCGAATTCTAAAACAGCAGCGT-C 185
consensus_9362#3 ACGTCACCCCGCCGATGGGTGCCCCGGATGTGCTGAAGGGCTTGCAAAAGCCTAGGTTAC 192
consensus_9362#0 GCAACGTCTTTGCGATCGGTGACT-GCTCATCTTCGCCGAATTCTAAAACAGCAGCGT-C 1250
consensus_9362#1 GCCCGAAAGTAACACCGTCCACACCAGTGGTGGTGATACAATCGAGTACGAATATTTGCT 440
* * * * * * *
consensus_9362#2 CGTCGCCGCCCAGTCGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGC-- 243
consensus_9362#3 CGAGGGTGGGCTATCGGTAGACGTGAACAAGGATACGCTGCAGGCATCAGAAATTCAGCA 252
consensus_9362#0 CGTCGCCGCCCAGACGCAAGTGGTGTACAAAAATTTAATGGCTGTGATGGAGGGCCGC-- 1308
consensus_9362#1 CGTTGCCGTCGGATTGCAGCTGAATTACGACAAAATTCCGGGCCTGCTGGAAGCCC---- 496
** * * * ** * * * ** *
consensus_9362#2 ACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACG 303
consensus_9362#3 ACGTCTTTGCGAGTCGGTGACATGCTCATCGTCTCGGCGCCGGAAAGCTCGTCTAACANA 312
consensus_9362#0 ACACCTAATCGAGTTTTCGACGGGTACGCGTCCTGCCCGCTGGTCACGGGATACAACACG 1368
consensus_9362#1 -TGTCGATACCGAACGGGAAGGTGTGCTCCAACTACTCGCCG--AAGTATGTCGACCGTA 553
* * * * * ** *** * * * * *
consensus_9362#2 TGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGA--AACTTTCCCGCTCGATC 361
consensus_9362#3 GAC---CAGGCCCAGGCGGGTTCCCGGATCAGGACACAGGG--CGC----CCAAGGGGTC 363
consensus_9362#0 TGTATGCTGGCCGAGTTCGATTACTCCCTGACGCCCTTGGA--AACTTTCCCGCTCGATC 1426
consensus_9362#1 CCTAC-CAGGCGCTGAAGAACTTCCGACCGGCAACGCCGTGTTCACCTTCCCGAACAGTC 612
* *** * * * * * * ** **
consensus_9362#2 AGCGCAAG-------GAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCG 414
consensus_9362#3 NG-GCGAG-------AAGGGTTNGCGATTGCTTACCAAAGAGGAGAGTTTTTTAANACG- 414
consensus_9362#0 AGCGCAAG-------GAGCGCTTCACGATGTACCTCATGAAGAAGGATTTCATGCCCCCG 1479
consensus_9362#1 CGGTCAAGTGTCCCGGAGCGCCCCAGAAGGTGCTGTACATTGCGGAGCCACTATTTACGC 672
* * ** ** * * * * * *
consensus_9362#2 CTCTACTGGCATCTGCTGCTGA---ACGGTCTGTGGAATGGGCCGGGACTGATG-----C 466
consensus_9362#3 ---TGGGGNCATTTGTCTGGAG---ATAGGACGAAGCGNGGGCNCCAGGGCAAA-----C 463
consensus_9362#0 CTCCACTGGCATCTGCTGCTGA---ACGGTCTGTGGAATGGGCCGGGACTGATG-----C 1531
consensus_9362#1 AAGTTCCAGAAAGCGCAAAAAATGCGCAGTCCATTACAAGANCTCGCTTGCACGGTTGCT 732
* * * * * *
consensus_9362#2 GAAAGTTGN-AT-GCA--TTTCCCGCTGTAANCGCCACGCGTTGAATGACCTGGTCTGGT 522
consensus_9362#3 GAACCNCGT-AAAGAA--GTTCGCGGANCAGGGTTTGTGAGACAGAGAACC-AACGTAG- 518
consensus_9362#0 GAAAGTTG---ATGCA--TTTCCGGCTGTAAGCGCAACGCGTTGAATGACC-TGTCTGGT 1585
consensus_9362#1 GTACGGCGTTACAGNACTATGCCCGATGCGGCTTCTGGGAAATACGTGGAG-AACGGGGC 791
* * * * * * * * * *
consensus_9362#2 ACATTGGTTTATT----------------------------------------------- 535
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 ACATTGGTTTATTTTGCTCTTTGTTGTCCAACTTTTCGATATCGATCGAATAGGAATGAA 1645
consensus_9362#1 ACATTTATTGTTACAATCTGGAGNCACG-------------------------------- 819
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 GGGATGAGAGATTATACATCACGTTAGTATCGATCTAACCACTGCAAATCGATCTAATCC 1705
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 ACTGGTGATTGAATCAAATGCAATTATTTTACAGTCTATCTTTTAATGTTTTCCCGAGAT 1765
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 ------------------------------------------------------------
consensus_9362#3 ------------------------------------------------------------
consensus_9362#0 TTATCGTAAATGTTTAAACTAGCTTAAAGCTACATTCTAAATTGCATTCAAAATCAGTTG 1825
consensus_9362#1 ------------------------------------------------------------
consensus_9362#2 -------------------------------------
consensus_9362#3 -------------------------------------
consensus_9362#0 GTAAATAAACTATCAAATGCAACATGTCAATATCGAA 1862
consensus_9362#1 -------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||