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Anopheles gambiae
cluster # 9374 cluster # 9374       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9374#0 length = 1033 sequences # 15  
consensus_9374#1 length = 666 sequences # 1  

consensusID : consensus_9374#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1033
fasta sequence
                              [CTGTTGGCCTACTGGAAAAAAAAACAAAACGAAATCGTTAACTGCAAAAGTTGTTTTCCTTCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGTGCGACTATCTAACGCGCCACT-GGTGCGCAACCTGGTGAACC-A-CTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC-GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT-CGTCATCTAGAATGGAGGAAT-CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGCAATTGGATTAATGGGAATTATTTTTTGCTTGATTTGTAACAAAAAAATGAACGAAAACTTAAAAAAGAAAAAAAA]

[-] EMBL CNS0940Y             [CTGTTGGCCTACTGGAAAAAAAAACAAAACGAAATCGTTAACTGCAAAAGTTGTTTTTCTTCGGTCCGGAAGGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGTGCGACTTTCTAACGCGCAACT GGTGCGCAACCTGGTGAACT ACCTCG TACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGATGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGTTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGATACGTGCGTTCATTGTAGCACT                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS092PN             [                                        ACTGCAAAAGTTGTTTTCCTTCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGTGCGACTATCTAACGCGCCACT GGTGCGCAACCTGGTGAACC A CTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAATGCGTCATCTAGAATGGAGGAATGCGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAACGGTCAGAGGAAACGAGACGTGCGTGCATTGTAGCACTGTCCATCGCGGGACAGACACTGTGGAGGAAGTAAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTGAAATCAAACGAATGTTATCTAAAATGATGGCGATAAAACATGCGTAACTTTTTTCTGGAAAAAGTGGCAGTTTTTTCAGTGAGTTATAA                                                                                ]
[+] EMBL CNS09E8I             [                                                       TTCCTTCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGTGCGACTATCTAACGCGCCACT GGTGCGCAACCTGGTGAACC A CTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAGGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCCGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGA                                                                                   ]
[+] EMBL CNS09J3E             [                                                            TCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGTGCGACTATCTAACGCGCCACTGGGTGCGCAACCTGGTGAACC A CTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAAAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAG                                                                                                                                                                       ]
[-] EMBL CNS09E8J             [                                                                                                                                       GCCACT GGTGCGCAACCTGGTGAACCAA CTCG TACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAGGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCCCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGCAATTGTATTAATGGGAATTATTTTTTGC                                               ]
[+] EMBL BX616990             [                                                                                                                                                                                              TCGTCCTCGCAGAAAAACCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTTAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGACAGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTC                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AGA284400            [                                                                                                                                                                                                                                                                  TGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AGA280526            [                                                                                                                                                                                                                                                                  TGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGACAGAAATCGCTGGATTATGTAATGTGG                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AGA280945            [                                                                                                                                                                                                                                                                  TGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGTGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCTATGC GGCCGGACTGGAACCGATCATTAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AGA282574            [                                                                                                                                                                                                                                                                                                 CGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGACAGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGC                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AGA285706            [                                                                                                                                                                                                                                                                                                                                             CGACCGCAGCGCCATGAACGCGTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGAATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGACAGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTT                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09J3F             [                                                                                                                                                                                                                                                                                                                                                                       TCTTCTTCACCGTCAAACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGGGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGCAATTGGATTAATGGGGATTATTTTTTGCTTGATTTGTAACAAAAAAATGAACGAAA                   ]
[-] EMBL AGA282228            [                                                                                                                                                                                                                                                                                                                                                                                                                          ACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGC GGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCACGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGACAGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAAC                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS092PO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGAGGTGAGACGTCGCGAGGC GGCCGAACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTCGCCGCAGCCGGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGCAATTGAATTAATGGGAATTATTTTTTGCTTGATTTGTAACAAAAAAATGAACGAAAACTTAAAAAAGAAAAAAAA]
[+] EMBL BM628762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgcccacGC GTCCG  CTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAAT CGTCATCTAGAATGGAGGAAT CGAGTAGCAGCAGCCGGGTAGCGGGCAGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTACATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAATAGGAAAAAATCTT                                                                                                                                                                                                                                               ]


>consensus_9374#0 CTGTTGGCCTACTGGAAAAAAAAACAAAACGAAATCGTTAACTGCAAAAGTTGTTTTCCT TCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGT GCGACTATCTAACGCGCCACTGGTGCGCAACCTGGTGAACCACTCGCTACGCAGTGCCCG GCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGC GGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAG CTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGTCGTTCTT CTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCC ACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGGC CGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGA CGAGGAGCTGGGCAACACCGAAATCGTCATCTAGAATGGAGGAATCGAGTAGCAGCAGCC GGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGACG GTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCA TTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATAAA TAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGATTT GTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGATAA AACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGCAA TTGGATTAATGGGAATTATTTTTTGCTTGATTTGTAACAAAAAAATGAACGAAAACTTAA AAAAGAAAAAAAA



consensusID : consensus_9374#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 666
fasta sequence
                              [CAACCTGGTGAACCACTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGCTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAATCGTCATCTAGAATGGAGGAATCGAGTAGCAGCAGCCGCGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCCGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGACAGAGTATGGAACGAACATCGTATTCCTGAATAAAAAAAAAAAAAAAAGGCCACATGTGCCCGACC]

[+] EMBL CNS0940X             [CAACCTGGTGAACCACTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGCTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGGCCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAATCGTCATCTAGAATGGAGGAATCGAGTAGCAGCAGCCGCGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCCGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGACAGAGTATGGAACGAACATCGTATTCCTGAATAAAAAAAAAAAAAAAAGGCCACATGTGCCCGACC]


>consensus_9374#1 CAACCTGGTGAACCACTCGCTACGCAGTGCCCGGCTGATTTCGTCCTCGCAGAAAAATCG CGACGCTGCCACGCTCGACGTGTCGAAGAAGGCGGCCGCATCGAGCAGTGGGGCGGCTGC CTCATCGGTCGGCACCGGGCGCAACTGGGTGAGCTATGGCTTCGACCGGAAGGATGAAAC GAACGACCGCAGCGCCATGAACGCGCTCGTTCTTCTTCACCGTCACACTGTGCCTGGTGC TGGGCTCGGCCTACTGGGCGTACGTGCCGGATCCACAGCTGCAGGATTGGGCCCAGCGTG AAGCGTACCTCGAGCTGAGACGTCGCGAGGCGGCCGGACTGGAACCGATCAGCAAGGACT TTGTCGACCCGGCCCAGATTGTGCTGCCCTCGGACGAGGAGCTGGGCAACACCGAAATCG TCATCTAGAATGGAGGAATCGAGTAGCAGCAGCCGCGGTAGCGGGCCGAAATCGCTGGAT TATGTAATGTGGTCCGCCTGCCGAAGGGGGAGACGGTGCTGATTTGGGTCTCGTTTGTAC ATAACAGCGGTCAGAGGAAACGAGACGTGCGTTCATTGTAGCACTGTGCATCGCGGGAGA CAGAGTATGGAACGAACATCGTATTCCTGAATAAAAAAAAAAAAAAAAGGCCACATGTGC CCGACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9374#0      CTGTTGGCCTACTGGAAAAAAAAACAAAACGAAATCGTTAACTGCAAAAGTTGTTTTCCT 60
consensus_9374#1      ------------------------------------------------------------
                                                                                  

consensus_9374#0      TCGGTCCGGAAAGTTACACTCCGGAAGATTGCCGGCCAGCAGCAAAATGTCCAGCCTAGT 120
consensus_9374#1      ------------------------------------------------------------
                                                                                  

consensus_9374#0      GCGACTATCTAACGCGCCACTGGTGCGCAACCTGGTGAACCACTCGCTACGCAGTGCCCG 180
consensus_9374#1      ---------------------------CAACCTGGTGAACCACTCGCTACGCAGTGCCCG 33
                                                 *********************************

consensus_9374#0      GCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGC 240
consensus_9374#1      GCTGATTTCGTCCTCGCAGAAAAATCGCGACGCTGCCACGCTCGACGTGTCGAAGAAGGC 93
                      ************************************************************

consensus_9374#0      GGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAG 300
consensus_9374#1      GGCCGCATCGAGCAGTGGGGCGGCTGCCTCATCGGTCGGCACCGGGCGCAACTGGGTGAG 153
                      ************************************************************

consensus_9374#0      CTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCG-TCGTTCT 359
consensus_9374#1      CTATGGCTTCGACCGGAAGGATGAAACGAACGACCGCAGCGCCATGAACGCGCTCGTTCT 213
                      **************************************************** *******

consensus_9374#0      TCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATC 419
consensus_9374#1      TCTTCACCGTCACACTGTGCCTGGTGCTGGGCTCGGCCTACTGGGCGTACGTGCCGGATC 273
                      ************************************************************

consensus_9374#0      CACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGG 479
consensus_9374#1      CACAGCTGCAGGATTGGGCCCAGCGTGAAGCGTACCTCGAGCTGAGACGTCGCGAGGCGG 333
                      ************************************************************

consensus_9374#0      CCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGG 539
consensus_9374#1      CCGGACTGGAACCGATCAGCAAGGACTTTGTCGACCCGGCCCAGATTGTGCTGCCCTCGG 393
                      ************************************************************

consensus_9374#0      ACGAGGAGCTGGGCAACACCGAAATCGTCATCTAGAATGGAGGAATCGAGTAGCAGCAGC 599
consensus_9374#1      ACGAGGAGCTGGGCAACACCGAAATCGTCATCTAGAATGGAGGAATCGAGTAGCAGCAGC 453
                      ************************************************************

consensus_9374#0      CG-GGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCAGAAGGGGGAGA 658
consensus_9374#1      CGCGGTAGCGGGCCGAAATCGCTGGATTATGTAATGTGGTCCGCCTGCCGAAGGGGGAGA 513
                      ** ********************************************* ***********

consensus_9374#0      CGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTT 718
consensus_9374#1      CGGTGCTGATTTGGGTCTCGTTTGTACATAACAGCGGTCAGAGGAAACGAGACGTGCGTT 573
                      ************************************************************

consensus_9374#0      CATTGTAGCACTGTGCATCGCGGGAGAGAGAGTGTGGAGGAAGTTAAGTAACGAATAATA 778
consensus_9374#1      CATTGTAGCACTGTGCATCGCGGGAGACAGAGTATGGAACGAACATCGTATTCCTGAATA 633
                      *************************** ***** ****   *     ***      ****

consensus_9374#0      AATAGGAAAAAATCTTAAGAATGTGCGTGGTACATTGGATGGTGAGCATTTGGTCATGAT 838
consensus_9374#1      AAAAAAAAAAAAA---AAGGCCACATGTGCCCGACC------------------------ 666
                      ** *  ******    ***       ***    *                          

consensus_9374#0      TTGTTTTGATTTTGAATCGACATGTCAGATCAAACGAATGTGATCTAAAATGATGGCGAT 898
consensus_9374#1      ------------------------------------------------------------
                                                                                  

consensus_9374#0      AAAACATGCGTGACTGTTTTCTGGAAAAAGTGGCAGTCTTTTCAGTCAGTGATAAATAGC 958
consensus_9374#1      ------------------------------------------------------------
                                                                                  

consensus_9374#0      AATTGGATTAATGGGAATTATTTTTTGCTTGATTTGTAACAAAAAAATGAACGAAAACTT 1018
consensus_9374#1      ------------------------------------------------------------
                                                                                  

consensus_9374#0      AAAAAAGAAAAAAAA 1033
consensus_9374#1      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)