These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9377#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1428 fasta sequence [CCGCCCACGCGTCCG-GCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT-AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC-GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC-GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGTACATACATTACTGATTTGTTGAGAAAAAAAAAAAAAAAAAAA] [+] EMBL BM579836 [CCGCCCACGCGTCCG GCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCT ] [+] EMBL BM656080 [ CCGAGCGTGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGT ] [+] EMBL BM603015 [ ccgGAAACGAGAGTTTGTGTTTTCCCCTATTAAGTTTCCCATTCCACGTCGCTGTCTGAGTGAAAATGCGCGAAAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGTTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCATGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGATGCAGAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGC ] [+] EMBL BX628925 [ TTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACA ] [-] EMBL CNS095ZS [ CACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGTTTTTTTTCGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGTACATACATTACTGATTTGTTGAGAAA ] [-] EMBL CNS09AT5 [ CTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AAACGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCAACTTGT ] [+] EMBL BM632715 [ ccGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATTTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTCGTGACGGGGTGCGAGGAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGTCAGCTGGTTGCACCGAACGAGTACCCGATCGAGTCGGTGCTGGTTGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGATCTGGGACGCGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGG ] [-] EMBL CNS08VQ8 [ CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGTGTTTGAAAACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACTTTTGGCGCATCCCGTCCGGCCACTGTAAGGTGCTGCCCGGGCACAAGGCACGCACCGAATCGGCCGGGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGGTCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGAACGGTCGGGAACAAGGAGAACATAAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGGCAGCCTGTACCTTATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGTTTTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGC GGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGTTACTTGTACATACAT ] [-] EMBL CNS08PDS [ ATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACAT AACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGAAC GGCAGCCTGTACCTGATGGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGTGCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAAGCTGACGTTCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCCGAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGGCGGTTGGATAAAGGGCTGGGACTTCCGGAGCGGGCGCGAAACGGTTCACCCTCGACGGGCACACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTCGGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGACAACTGCTACTTGTACATACATTATTGATTTGTTGTGAAAAAAAAAAAAAAAAAAA] consensusID : consensus_9377#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 998 fasta sequence [TCGCCGAGGTTTTACC-GGTTTGTTATTGTTATTGCTGTGCAGCGT-GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA-GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG-CAGAAACGGGACCGGCA-GCGGAACAG-CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT-GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGATGGGCCGGGTTTTTGGTGGGG] [+] EMBL AL696404 [TCGCCGAGGTTTTACC GGTTTGTTATTGTTATTGCTGTGCAGCGT GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAACGAGAGTTTGTA TTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCG CCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCCAGAAGCGGGACCGGCAGGCGGAACAGCCACGCCCTTCG CGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCA CCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAAGTGCTGCACGAGGTGACGAACCATTC ] [+] EMBL CNS095ZR [ gTTACCAGGTTTGTTATTGTTATTGCTGTGCAGCGT GTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAGACACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCAAAAAAAAAAAGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGATGGGCCGGGTTTTTGGTGGGG] [+] EMBL CNS09AT4 [ TATTGCTGTGCAGCGTGGTACCGCATGGTATTCCCTTCTCGCAAAAGCAGTTTGGTTTTTAGTTTCGTTGTGAAA GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCT GGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGG ] [+] EMBL CNS08PDR [ CAG TTGGTTTTTAGTTTCGTTGTGAAA GAGAGTATGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTTAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGC ] [+] EMBL CNS08VQ7 [ GTTGTGAAC GAGAGTTTGTATTTTCCCCCATTAAGTTTCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAAAACACGCCGCCCCGCTCACCGATGGACGAGCTGGTGGAGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACG CAGAAACGGGACCGGCA GCGGAACAG CACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTAGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCACGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTTTGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCGCCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAACGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGCCGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGA ] consensusID : consensus_9377#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence [AGAATCCCCGAGGTTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCCGACTCGGTGTGTGGCGGTGGGCTTCAGCTACGATGGCAGACTTTGTCGACGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGCAGGTGGACAGTACGGTCGGGCA] [+] EMBL AL933334 [AGAATCCCCGAGGTTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCCGACTCGGTGTGTGGCGGTGGGCTTCAGCTACGATGGCAGACTTTGTCGACGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGAGTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCTGCTGGCAGGTGGACAGTACGGTCGGGCA] consensusID : consensus_9377#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 403 fasta sequence [ATCGCCCCGAGGTGGTTTTTAGTTCGCTGTGAAACGAGAGTTTGTATTTTCCCCTATTAAGTTTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTG] [+] EMBL AL930593 [ATCGCCCCGAGGTGGTTTTTAGTTCGCTGTGAAACGAGAGTTTGTATTTTCCCCTATTAAGTTTCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAGAATACGCCGCCCCGTTCACCGATGGACGAGCTGGTGGGGGAAGATGACGACGACGAGGAGCTGATTTACGTGGGCGATGCCGATGAGGTGCTGGACGCTTGGGAGCAGGAGGAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACAGCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGCAAAGCTGACGTTCACCAAACACACCGCGCCGGTGTTCTGTGGCGCCCTTCACCCCACGGAAGAGCTGGCCGTTACCGGCGGTGAGGATGACAAAGCGTACGTGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9377#0 --------------------------CCGCCCACGCGTCCGGCGTGTACCGCATGGTATT 34 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 TCGCCGAGGTTTTACCGGTTTGTTATTGTTATTGCTGTGCAGCGTGTACCGCATGGTATT 60 consensus_9377#2 -----------------------------------------------AGAATCCCCGAGG 13 consensus_9377#0 CCCTTCTCGCAAAAGCAGTTTGGTTTTTAGT----TTCGTTGTGAAACGAGAG----TTT 86 consensus_9377#3 ---ATCGCCCCGAGG-----TGGTTTTTAGT----T-CGCTGTGAAACGAGAG----TTT 43 consensus_9377#1 CCCTTCTCGCAAAAGCAGTTTGGTTTTTAGT----TTCGTTGTGAAA-GAGAG----TTT 111 consensus_9377#2 TTAAATGACGTAAGAGCTGGATGCANCAAGCGGGACCGGCAGCGGAACAGCATGCCCTTC 73 * * ** * * * ** * ** consensus_9377#0 GTATTTTCCCCCATTAAGTT--TCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAG 144 consensus_9377#3 GTATTTTCCCCTATTAAGTT--TCCCATTCCACATCGCTGTCTGAGTGAAAATGCGCGAG 101 consensus_9377#1 GTATTTTCCCCCATTAAGTT--TCCCGTTCCACATCGCTGTCTGAGTGAAAATGCGCGAA 169 consensus_9377#2 GCCGTTCGCCCGTACAGGACGATGCAAAGCTGTACTGTTCACCAAAC-ACACCGCGCCGG 132 * ** *** * * * * * * * * * * * * **** consensus_9377#0 AATAC-GCCGCCCCGTTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 193 consensus_9377#3 AATAC-GCCGCCCCGTTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 150 consensus_9377#1 AACAC-GCCGCCCCGCTCACCG-ATGGACGAGCTGGTGG---------GGGAAGATGACG 218 consensus_9377#2 TGTTCTGTGGCGCTCTTCACCCCACGGAAGAGCTANCCGTTACCGGCGGTGAGGATGACA 192 * * ** * ***** * *** ***** * * ** ****** consensus_9377#0 ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 246 consensus_9377#3 ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 203 consensus_9377#1 ACG---ACGAGGAGCTGATTTACGTGGGCGATGCCG----ATGAGGTGCTGGACGCTTGG 271 consensus_9377#2 AAGCGTACGTGTGGCACATACGCACCGGCGAGGCTGCTGCACNAGGTGACGAATCATTCC 252 * * *** * ** ** * ***** ** * * ***** * * ** consensus_9377#0 GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAGCGGGACCGGCAGCGGAACA 305 consensus_9377#3 GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACA 262 consensus_9377#1 GAGCAGGAG-GAAGCGGAAGACGAAGAGCTGGACGCAGAAACGGGACCGGCAGCGGAACA 330 consensus_9377#2 GACTCGGTGTGTGGCGGTGGGCTTC-AGCTACGATGGCAGACTTTGTCGACGACCGG-CG 310 ** ** * * **** * * **** * * ** * * * * consensus_9377#0 GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 359 consensus_9377#3 GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 316 consensus_9377#1 GCACGCCCTTCGCCGTTCGCCCGTACAGGACGATGC-AAAGCTGACGTTCACC-----AA 384 consensus_9377#2 ATATGGCCGGCTACATACAGGTGTTCAAGGTGATGCCAAAACTTATCGCCAGGTGTGGGA 370 * * ** * * * * ** ** * ***** *** ** * ** * consensus_9377#0 ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTG-GCCGT 413 consensus_9377#3 ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTG-GCCGT 370 consensus_9377#1 ACACACCGCGC-CGGTGTTCTGTGG-CGCCCTT---CACCCCACGGAAGAGCTA-GCCGT 438 consensus_9377#2 GTTTACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGACGCGAACGATGCGTGAT 430 **** * ** * * **** ** ** *** *** * * * * * consensus_9377#0 TACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCA 473 consensus_9377#3 TACCGGCGGTGAGGATGACAAAGCGTACGTGTG--------------------------- 403 consensus_9377#1 TACCGGCGGTGAGGATGACAAAGCGTACGTGTGGCACATACGCACCGGCGAGGTGCTGCA 498 consensus_9377#2 GGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGACTGTAAGGT 490 * *** * **** * * * * ********* consensus_9377#0 CGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTT 533 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CGAGGTGACGAATCATTCCGACTCGGTGGTGGCGGTGGGCTTCAGCTACGATGGCAGCTT 558 consensus_9377#2 GCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGGCAAGCGGCT 550 consensus_9377#0 TGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCG 593 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 TGTCGCGACCGGCGATATGGCCGGCTACATACAGGTGTTCAAGGTGAGCCAAAACTATCG 618 consensus_9377#2 GCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGGCACGCCGCT 610 consensus_9377#0 CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAA 653 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CCAGGTGTGGGAGTTCACCGTGGGCGATATGGGGTGGATGCGCTGGCACACGGGCGCGAA 678 consensus_9377#2 GCTGGCAGGTGGACAGTACGGTCGGGCA-------------------------------- 638 consensus_9377#0 CGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGA 713 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CGTGCTGATGGCGGGCTGCGAGGCGGGCGAGGTGTACGTGTGGCGCATCCCGTCCGGCGA 738 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGG 773 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CTGTAAGGTGCTGCCCGGGCACGAGGCACGCACCGAATCGGCCGAGCTGCTGCACGACGG 798 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGG 833 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CAAGCGGCTGCTCGTCGGGTACGGCAATGGGCACGTGAAGCTGTGGGATCTGAAGTCGGG 858 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGC 893 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CACGCCGCTGCTGGAGGTGGACAGTACGGTCGGGCACAAGGAGAACATAACGGCGCTGGC 918 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGAT 953 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 CGCCGACCAGGACGGGCAGCTGTTTGTGACGGGGTGCGAGGACGGCAGCCTGTACCTGAT 978 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 GGGCCCGGGCGGCGTGCTGGGCCAGCTGGTCGCACCGAATGAGTACCCGATCGAGTCGGT 1013 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 GGGCCGGGTTTTTGGTGGGG---------------------------------------- 998 consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 GCTGGTGGACTATCCCGGGTTCGAGATGAAGGTGGCCGCGTCGGGCACGCTGCAGGGCAA 1073 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 GCTGACGATCTGGGACACGGCCCGCCAGACGAAGCGCGTTGAGTGTGAGGACGACAATCC 1133 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 GAACGGCATTACCAAATTGGTCTGGCTGAAGGACTTTACTATCTGTGCCGGTACGCTGGG 1193 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CGGTTGGATAAAGGGCTGGGACTTCCGGAGCGGCGCGAAACGGTTCACCCTCGACGGGCA 1253 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 CACGAACGACATCCAGAGCCTTTCGTACGACAGGCAGCGCAACCTGATCCTGTCCACCTC 1313 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 GGAGGACTGCACAGCGAAGATATTCGAAGTGCCGGCCGCAGGTCAATAAGCTACGGGGAC 1373 consensus_9377#3 ------------------------------------------------------------ consensus_9377#1 ------------------------------------------------------------ consensus_9377#2 ------------------------------------------------------------ consensus_9377#0 AACTGCAACTTGTACATACATTACTGATTTGTTGAGAAAAAAAAAAAAAAAAAAA 1428 consensus_9377#3 ------------------------------------------------------- consensus_9377#1 ------------------------------------------------------- consensus_9377#2 ------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||