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Anopheles gambiae
cluster # 9379 cluster # 9379       Sequences # 16       consensus # 7


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9379#0 length = 1630 sequences # 7  
consensus_9379#1 length = 1032 sequences # 3  
consensus_9379#2 length = 687 sequences # 2  
consensus_9379#3 length = 682 sequences # 1  
consensus_9379#4 length = 678 sequences # 1  
consensus_9379#5 length = 338 sequences # 1  
consensus_9379#6 length = 255 sequences # 1  

consensusID : consensus_9379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1630
fasta sequence
                              [GTGCAAGCGCTTCATCAGCGGAGAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACTTCGTGTAAAGGGTGATTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCGAACGATGTAACGGCAGGCAACATCCAGTGGCGCTCGTTTTGCTGTGAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGGCGGCGCGA-GGAGGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCGGCCGACCGTTTGCGCCACCCGCCAATGGGACGGACAAA-GAGGCCACCACCATCCCGCCGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGGAGCGTTGCAACTCCGACTCGGAAAATCTCGCCGAACTGCTGGACGAGGAAC-GGTGCGTGTCGCTTTCCCACC-GGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTA-CCGAGTGCGCAAGGTTGATGGA-GGTGGCCGGGAGAAGAAACTCTCCGGCACGGTCGTGCCG-GCCGGGGAAGATCC-ACCCCTCGGAAGTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCACCGTTCGTGT-TTGCCAAG-AAGGGAACGCTTGCCGGTCCGGGCAAGCGTT-CCAGTTCCAG--CTCGA-GCTCCAGCTCC-AACACGAG-CTCCTCTTCCAGC-TCC-AAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCA-AAGCACGG--CGTCCGT-TGCCT--CCC-GTTCGCCATCGTCCGCCTCGACCATTACGATAAGCTCGCAACGCAACAGTGGCGACTCGGGGCAG-TTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGCTTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAAGAAGTAGAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGTTGGAGTGCGTAAACGCCCCAG]

[+] EMBL CNS09NH9             [GTGCAAGCGCTTCATCAGCGGAGAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACTTCGTGTAAAGGGTGATTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCGAACGATGTAACGGCAGGCAACATCCAGTGGCGCTCGTTTTGCTGTGAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGGCGGCGCGA GGAGGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCGGCCGACCGTTTGCGCCACCCGCCAATGGGACGGACAAA GAGGCCACCACCATCCCGCCGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGGAGCGTTGCAACTCCGACTCGGAAAATCTCGCCGAACTGCTGGACGAGGAAC GGTGCGTGTCGCTTTCCCACC GGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTA CCGAGTGCGCAAGGTTGATGGA GGTGGCCGGGAGAAGAAACTCTCCGGCACGTTCGTGCGGCGCGGGGGAAGATCC ACCCCTCGGAAGTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCACCGTTCGTGT TTGCCAAG AAGGGAACGCTTGCCGGTCCGGGCAAGCGTT CCAGTTCCAG  CTCGA GCTCCAGCTCC AACACGAG CTCCTCTTCCAGC TCC AAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGTA AAGCACGG  CGTCCGG GGCCT  CCC GTTCGCCATCGTCCGCCTCGACCATTACGATAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09CZ2             [                  gcggccAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACTTCGTGTAAAGGGTGATTTAATGTGTTTGTGCTTTAGAAGTGACCGATCAACCGCACAGAAAGTGTCCATTATTCGAACGATGTAACGGCAGGCAACATCCAGTGGCGCTCGTTTTGCTGTGAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGGCGGCGCTATGGAGGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCGGCCGACCGTTTGCGCCACCCGCCAATGGGACGGACAAA GAGGCCACCACCATCCCGCCGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGGAGCGTTGCAACTCCGACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AL695488             [                                                                                                                                                                                                                                                                                                                                                                                                                    gccCGAGGTTTAGATTAGCGG CGACCGTTTGCGCCACCCGCCAATGGGACGGACAAACGAGG CACCACCATCCCGCCGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGGAGCGTTGCAACTCCGACTCGGAAAATCTCGCCGAACTGCTGGACGAGGAACAGGTGCGTGTCGCTTTCCCACCTGGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTACCCGAGTGCGCAAGGTTGATGGACGGTGGCCGGGAGAAGAAACTCTCCGGCACGGTCGTGCCG GCCGGGGAAGATCCAACNCCTCGGAAGTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCACCGTTCGTGTNNTGACAAG AAGGGAACGCTTGCCGGTCCGGGCAAGCGTTCCCAGTTCCAGGACTCGAGGCTCCAGATCCAAACACGAGNCTCCTCTTCCAGCGTCCAAAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCACAAGCACGGGNGGTCCGTATGCCTACCCCGGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM635793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgCAAA GAGGCCACCACCATCCCGCCGGTGGTCGAGGATGATGCACCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGGAGCGTTGCAACTCCGATTCGGAAAATCTCGCCGAACTGCTGGACGAGGAAC GGTGCGTGTCGCTTTCCCACC GGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTA CCGAGTGCGCAAGGTTGATGGA GGTGGCCGGGAGAAGAAACTCTCCGGCACGGTCGTGCCG GCCGGGGAAGATCC ACCCCTCGGAAGTGCGGTTCCGGTGAAACCCAAGCCAAGGCCACCACCGTTCGT T TTG CAAGAAAGGGAACGCTTGCCGGTCCGGGCAAGCGTT CCAGTTCCAG  CTCGA GCTCCAGCTCC AACACGAG CTCCTCCTCCAGC TCC AAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCA AAGCACGG  CGTCCGT TGCTT  CCC GTTCGCCATCGACCGCCTCTACCATTACGATAAGCTCGGAGCGCAACAGTGGCGACTCGGGGCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCGCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09NHA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             gcccTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCACCGTTCGTGT TTGCCAAG AAGGGAACGCTTGCCGGTCCGGGCAAGCGTT CCAGTTCCAG  CTCGA GCTCCAGCTCC AACACGAG CTCCTCTTCCAGC TCC AAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGTA AAGCACGG  CGTCCGT TGCCT  CCC GTTCGCCATCGTCCGCCTCGACCATTACGATAAGCTCGCAACGCAACAGTGGCGACTCGGGGCAG TTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGCTTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAAGAAGTAGAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGTTGGAGTGCGTAAACGCCCCAG]
[+] EMBL BX612069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTCCAGCTCC AACACGAG CTCCTCTTCCAGC TCC AAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCA AAGCACGG  CGTCCGT TGCCT  CCC GTTCGCCATCGTCCGCCTCGACCATTACGATAAGCTCGCAACGCAACAGTGGCGACTCGGGGCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS09CZ3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGCTTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAAGAAGTAGAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTACTCCTCATCTGCTTCGTGTTCGTTTTTTATCTCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTG                                                           ]


>consensus_9379#0 GTGCAAGCGCTTCATCAGCGGAGAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTA TCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACTTCGTGTAAAGGGTGA TTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCG AACGATGTAACGGCAGGCAACATCCAGTGGCGCTCGTTTTGCTGTGAGCTTGCGCAGTGT AGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCC TCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTCCTTTC TGATGCTTTACTTCGGGCGGCGCGAGGAGGCGGCCCAGTACTGCTACGAGCTGGAGATTA GCGGCCGACCGTTTGCGCCACCCGCCAATGGGACGGACAAAGAGGCCACCACCATCCCGC CGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGG AGCGTTGCAACTCCGACTCGGAAAATCTCGCCGAACTGCTGGACGAGGAACGGTGCGTGT CGCTTTCCCACCGGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTACC GAGTGCGCAAGGTTGATGGAGGTGGCCGGGAGAAGAAACTCTCCGGCACGGTCGTGCCGG CCGGGGAAGATCCACCCCTCGGAAGTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCAC CGTTCGTGTTTGCCAAGAAGGGAACGCTTGCCGGTCCGGGCAAGCGTTCCAGTTCCAGCT CGAGCTCCAGCTCCAACACGAGCTCCTCTTCCAGCTCCAAATCGGAATCGTCTACCGGGT CAGGCAAAACGGTGCAAAGCACGGCGTCCGTTGCCTCCCGTTCGCCATCGTCCGCCTCGA CCATTACGATAAGCTCGCAACGCAACAGTGGCGACTCGGGGCAGTTGCAGCAGCAGGCGC AATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTT CGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAG TGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGA CAAAAAGCTTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAAGAAGTAGAGTGT GTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTT TATCTCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGTTCGCCTACCACACCAG CACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCC ACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGT GAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACC CAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGTTGGAGTGCGTA AACGCCCCAG



consensusID : consensus_9379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1032
fasta sequence
                              [GAATNCGCGCACGAGGGCCAGGCCACCACCGTTCGTGTTTGCCAAGAAGGGAACGCTTGCCGGTCCGGGCAAGCGTTCCAGTTCCAGCTCGAGCTCCAGCTCCAACACGAGCTCCTCCTCCAGCTCCAAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCAAAGCACGGCGTCCGTTGCTTCCCGTTCGCCATCGACCGCCTCTACCATTACGATAAGCTCGGAGCGCAACAGTGGCGACTCGGGGCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCGCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCGGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTA---GTGGTGGTGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGC-TTGCCTTTCACCGATNCATGCAAGAATCTCGCAAAGGGAA-GAAGTA-AGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTGTACGTTTATGTGTGTGTGTGTGTCTGTGTGCGTCTTTCAACACAGCGCCTACTATTTGAATTTTGTATCGTGACCCCGCCCCGATTCCTGCCTCCTCCCGTTGCAGCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGCTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGNTGGAGTGCGTAAACGCCCCCAGCTGTGGTCGAATTTTCAGCTTCCCACACTAATAAACTACTCATT]

[+] EMBL BX467658             [GAATNCGCGCACGAGGGCCAGGCCACCACCGTTCGTGTTTGCCAAGAAGGGAACGCTTGCCGGTCCGGGCAAGCGTTCCAGTTCCAGCTCGAGCTCCAGCTCCAACACGAGCTCCTCCTCCAGCTCCAAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCAAAGCACGGCGTCCGTTGCTTCCCGTTCGCCATCGACCGCCTCTACCATTACGATAAGCTCGGAGCGCAACAGTGGCGACTCGGGGCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCGCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCGGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGTGGTGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGCTTTGCCTTTCACCGATNCATGCAAGAATCTCGCAAAGGGAAGGAAGTA AGTGTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX625685             [                                                                                                                                                                                                                                                         GCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTA   GTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGC TTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAA GAAGTAGAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTGTACGTTTATGTGTGTGTGTGTGTCTGTGTGCGTCTTTCAACACAGCGCCTACTATTTGAATTTTGTATCGTGACCCCGCCCCGATTCCTGCCTCCTCCCGTTGCAGCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGCTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGNTGGAGTGCGTAAACGCCCCCAGCTGTGGTCGAATTTTCAGCTTCCCACACTAATAAACTA      ]
[+] EMBL BX610073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTGTACGTTTATGTGTGTGTGTGTGTCTGTGTGCGTCTTTCAACACAGCGCCTACTATTTGAATTTTGTATCGTGACCCCGCCCCGATTCCTGCCTCCTCCCGTTGCAGCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGCTTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCATCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGTTGGAGTGCGTAAACG CCCCAGCTGTGGTCGAATTTTCAGCTTCCCACACTAATAAACTACTCATT]


>consensus_9379#1 GAATNCGCGCACGAGGGCCAGGCCACCACCGTTCGTGTTTGCCAAGAAGGGAACGCTTGC CGGTCCGGGCAAGCGTTCCAGTTCCAGCTCGAGCTCCAGCTCCAACACGAGCTCCTCCTC CAGCTCCAAATCGGAATCGTCTACCGGGTCAGGCAAAACGGTGCAAAGCACGGCGTCCGT TGCTTCCCGTTCGCCATCGACCGCCTCTACCATTACGATAAGCTCGGAGCGCAACAGTGG CGACTCGGGGCAGCTTGCAGCAGCAGGCGCAATGGATAGCCGCCACTCGCTGTCGTCCAT TAATCGCCTGACGACTCCACTGACGCCGTTCGAAAAGCCGGAACAGTGTCCGCTGATGAC GCCTTCCATCAACAAGCACGATGTGGTGAGTGGTAGTGGTAGTGGTGGTGGTGGTATACG TGCTGCCCGGTCGAAGCAGAACGCGATCGACAAAAAGCTTGCCTTTCACCGATNCATGCA AGAATCTCGCAAAGGGAAGAAGTAAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTC TGCTCCTCATCTGCTTCGTGTTCGTTTTTTATCTGTACGTTTATGTGTGTGTGTGTGTCT GTGTGCGTCTTTCAACACAGCGCCTACTATTTGAATTTTGTATCGTGACCCCGCCCCGAT TCCTGCCTCCTCCCGTTGCAGCCACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGC TTCGCCTACCACACCAGCACCGAGTACCATCGGCAGGTGTACGGACACGAGCCGTACCGC ATCTCGCGCCATTATCCACCGTCCGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTAC ACGCAGCCGTACAAGGTGAAGGACGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGT CTGTTCAAACCGCAACCCAAGTGGTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAG GGTGGNTGGAGTGCGTAAACGCCCCCAGCTGTGGTCGAATTTTCAGCTTCCCACACTAAT AAACTACTCATT



consensusID : consensus_9379#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 687
fasta sequence
                              [CCGCAGCGGAGCAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCACCAGGCGATGTGTCCG]

[+] EMBL BM581237             [CCGCAGCGGAGCAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCACCAGGCGATGTGTCCG]
[+] EMBL BM632983             [  ccgGCGGAGCAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGT       CTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATC                              ]


>consensus_9379#2 CCGCAGCGGAGCAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTATCGGTGTGCCC CTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGCTTGCGCAGTGTAGT ATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCC GATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAA AAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTG TGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCAT CTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATAT CACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAA CCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAG GTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAAC AGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAG AAGCTGCTGCACCAGGCGATGTGTCCG



consensusID : consensus_9379#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 682
fasta sequence
                              [CCGCCCACGCGTCCGATTCGAACGATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTTGCTGTGGAGCAAGCTCTAATATAACACCCGCTGATAATGGGTCGGATAAGACACGGACAGCAATAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGA]

[+] EMBL BM591986             [CCGCCCACGCGTCCGATTCGAACGATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTTGCTGTGGAGCAAGCTCTAATATAACACCCGCTGATAATGGGTCGGATAAGACACGGACAGCAATAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCAGAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAGTGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATTGCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGA]


>consensus_9379#3 CCGCCCACGCGTCCGATTCGAACGATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTT GCTGTGGAGCAAGCTCTAATATAACACCCGCTGATAATGGGTCGGATAAGACACGGACAG CAATAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACA CATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAA GGAAGAAGCTCTGTGCAAAAAAAAGGGATTAAAGCAGGGTTGCCAAAATGCAAAACGGCA GAAATGTCAATGCGTGATTTGTGTTGCCAAACAGCGAAGTAGCCATTGGAAGGCCGTCAG TGCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAATTCGCAATT GCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGTCGCTGTGGACAGAGTATAATT GGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGGAGATGTAAGCAGTGT TGCAATTTCCCGAACGGGGAGGTGTACCAGTGTGCTGCCAAGGATCACTTTTACTGCGCC GCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGCGAAGCTGAAGGATGGC AAGGTACCGAACCCGATCGAGA



consensusID : consensus_9379#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence
                              [TCATTATATTTTAAATTGAATGCTGAACTGAAGCTACCCCAAAGCACGAAGCGATTATTTGTTCCCCTGTGTGCGTGCGTGTGTGCTACACGCGTTGCGCTGTTGCGTGTGCATGTGTGCGTCTGTTTCAAGCTCGCGTCCGATCGCGTCGATGAAGCTGCAGCCCCAGCATCCATCCATTCATGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCACCAAGCGATGTGTCCGTGCCGCTACGCACCGAACGGATGTACCTGGAAGTTTGTGCAGAGCGAGATGGACGCGCACTTGGTCGAGTGTCGCTTCCGGCCGTACCGATGTGTGGCTGCTTCGTTGAACGTGATCAAATGCAACTGGCAAGGTTTGCAGCACGAGATCGAGGACCATCTAGCGAAGGGCCACAAAGAGCTGGGCGAGGTGTTCCGGTTCCGCGAGAGCACCTCGCTCGTGTTCAAGGAGCAGATCTCGCTCGGCGGTCTCAAGCTGGTCGATGCGTTCAGCAAGCGCTTCCTGTTCTACTTCTTCTCGGACGTCGCCCACAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGGCGGCGCGANGANGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCCGGCCGACCGTTTGCGCCACCCGCCAATGGGAC]

[+] EMBL BX626408             [TCATTATATTTTAAATTGAATGCTGAACTGAAGCTACCCCAAAGCACGAAGCGATTATTTGTTCCCCTGTGTGCGTGCGTGTGTGCTACACGCGTTGCGCTGTTGCGTGTGCATGTGTGCGTCTGTTTCAAGCTCGCGTCCGATCGCGTCGATGAAGCTGCAGCCCCAGCATCCATCCATTCATGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCACCAAGCGATGTGTCCGTGCCGCTACGCACCGAACGGATGTACCTGGAAGTTTGTGCAGAGCGAGATGGACGCGCACTTGGTCGAGTGTCGCTTCCGGCCGTACCGATGTGTGGCTGCTTCGTTGAACGTGATCAAATGCAACTGGCAAGGTTTGCAGCACGAGATCGAGGACCATCTAGCGAAGGGCCACAAAGAGCTGGGCGAGGTGTTCCGGTTCCGCGAGAGCACCTCGCTCGTGTTCAAGGAGCAGATCTCGCTCGGCGGTCTCAAGCTGGTCGATGCGTTCAGCAAGCGCTTCCTGTTCTACTTCTTCTCGGACGTCGCCCACAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGGCGGCGCGANGANGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCCGGCCGACCGTTTGCGCCACCCGCCAATGGGAC]


>consensus_9379#4 TCATTATATTTTAAATTGAATGCTGAACTGAAGCTACCCCAAAGCACGAAGCGATTATTT GTTCCCCTGTGTGCGTGCGTGTGTGCTACACGCGTTGCGCTGTTGCGTGTGCATGTGTGC GTCTGTTTCAAGCTCGCGTCCGATCGCGTCGATGAAGCTGCAGCCCCAGCATCCATCCAT TCATGTGGAGCGAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCAC CAAGCGATGTGTCCGTGCCGCTACGCACCGAACGGATGTACCTGGAAGTTTGTGCAGAGC GAGATGGACGCGCACTTGGTCGAGTGTCGCTTCCGGCCGTACCGATGTGTGGCTGCTTCG TTGAACGTGATCAAATGCAACTGGCAAGGTTTGCAGCACGAGATCGAGGACCATCTAGCG AAGGGCCACAAAGAGCTGGGCGAGGTGTTCCGGTTCCGCGAGAGCACCTCGCTCGTGTTC AAGGAGCAGATCTCGCTCGGCGGTCTCAAGCTGGTCGATGCGTTCAGCAAGCGCTTCCTG TTCTACTTCTTCTCGGACGTCGCCCACAAGAAGCTCTCCTTTCTGATGCTTTACTTCGGG CGGCGCGANGANGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCCGGCCGACCGTTTGC GCCACCCGCCAATGGGAC



consensusID : consensus_9379#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 338
fasta sequence
                              [CCGGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGGTGATTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCGAACGATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTTGCTGTGGAGCAAGCTCTAATATAACACCCGCTGATAATGGGTCGGATAAGACACGGACAGCAATAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGG]

[+] EMBL BM589368             [CCGGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGGTGATTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCGAACGATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTTGCTGTGGAGCAAGCTCTAATATAACACCCGCTGATAATGGGTCGGATAAGACACGGACAGCAATAGCTTGCGCAGTGTAGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGG]


>consensus_9379#5 CCGGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGGTGATTTA ATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCGAACG ATGTAACGGCAGGAAACATCCAGTGGCGCTCGTTTTGCTGTGGAGCAAGCTCTAATATAA CACCCGCTGATAATGGGTCGGATAAGACACGGACAGCAATAGCTTGCGCAGTGTAGTATA ATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGAT GTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGG



consensusID : consensus_9379#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 255
fasta sequence
                              [GCCCCGAGGCGAGCACGGGCGTATCAGTCTTGCGCAGTGTAGTATAATCCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCCAAGTGGCTGAAATTACCGATAAGGAAGAAGCTCTGTGCCAAAAAAAACAGGGNATTAAAGCCAGGGTTGCCCAAAATGGGAAAACGGCCAGCAAATGGTCCAAAGCCGTGATTTGTGTTGCCCAAACCAGCG]

[+] EMBL AL933768             [GCCCCGAGGCGAGCACGGGCGTATCAGTCTTGCGCAGTGTAGTATAATCCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGACCCAAGTGGCTGAAATTACCGATAAGGAAGAAGCTCTGTGCCAAAAAAAACAGGGNATTAAAGCCAGGGTTGCCCAAAATGGGAAAACGGCCAGCAAATGGTCCAAAGCCGTGATTTGTGTTGCCCAAACCAGCG]


>consensus_9379#6 GCCCCGAGGCGAGCACGGGCGTATCAGTCTTGCGCAGTGTAGTATAATCCCGGACTGTCT ACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCCTCCGATGTTGAAGCTTGGA CCCAAGTGGCTGAAATTACCGATAAGGAAGAAGCTCTGTGCCAAAAAAAACAGGGNATTA AAGCCAGGGTTGCCCAAAATGGGAAAACGGCCAGCAAATGGTCCAAAGCCGTGATTTGTG TTGCCCAAACCAGCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9379#0      GTGCAAGCGCTTCATCAGCGGAGAAGATCGCAGTCGCCGCTGGGAAAGTAGTTGCTGTTA 60
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TCGGTGTGCCCCTTGTTGCCAGTGTTGATAGAAACGCGTTACACTTCGTGTAAAGGGTGA 120
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TTTAATGTGTTTGTGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCG 180
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      AACGATGTAACGGCAGGCAACATCCAGTGGCGCTCGTTTTGCTGTGAGCTTGCGCAGTGT 240
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      AGTATAATCCGGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGATTAGTGCC 300
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TCCGATGTTGAAGCTTGGACCAAGTGGCTGAAATTACGATAAGGAAGAAGCTCTCCTTTC 360
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TGATGCTTTACTTCGGGCGGCGCGAGGAGGCGGCCCAGTACTGCTACGAGCTGGAGATTA 420
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GCGGCCGACCGTTTGCGCCACCCGCCAATGGGACGGACAAAGAGGCCACCACCATCCCGC 480
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      CGGTGGTCGAGGATGATGCATCCGACGCGAGCGTCTTCTCCCGCACCGTTAAGTTTGTGG 540
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      AGCGTTGCAACTCCGACTCGGAAAATCTCGCCGAACTGCTGGACGAGGAACGGTGCGTGT 600
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      CGCTTTCCCACCGGCAGGTGAAAAACTACCTGCACGAGGGCAAGCTTCACATGCGGTACC 660
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GAGTGCGCAAGGTTGATGGAGGTGGCCGGGAGAAGAAACTCTCCGGCACGGTCGTGCCGG 720
consensus_9379#1      ------------------------------------------------------------
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      -----------------------------------------------------------T 1
                                                                                  

consensus_9379#0      CCGGGGAAGATCCACCCCTCGGAAGTGCGGTACCGGTGAAACCCAAGCCAAGGCCACCAC 780
consensus_9379#1      -----------------------------GAATNCGCGCA--CGAGGGCCAGGCCACCAC 29
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      -------------------------------------------------CCGGCCCCTTG 11
consensus_9379#4      CATTATATTTTAAATTGAATGCTGAACTGAAGCTACCCCAAAGCACGAAGCGATTATTTG 61
                                                                                  

consensus_9379#0      CGTTCG-TGTTTGCCAAGAAGGGAACGCTTGCCGGTCCGGGC-AAGCGTTCCAGTTCCAG 838
consensus_9379#1      CGTTCG-TGTTTGCCAAGAAGGGAACGCTTGCCGGTCCGGGC-AAGCGTTCCAGTTCCAG 87
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      TTGCCA-GTGTTGATAGAAACGCGTTACACATCGTGTAAAGG-GTGATTTAATGTGTTTG 69
consensus_9379#4      TTCCCCTGTGTGCGTGCGTGTGTGCTACACGCGTTGCGCTGTTGCGTGTGCATGTGTGCG 121
                                                                                  

consensus_9379#0      CTCGAGCTCCAGCTCCAACACGAGCTCCTCTTCCAGCTCCAAATCGG--AATCGTCTACC 896
consensus_9379#1      CTCGAGCTCCAGCTCCAACACGAGCTCCTCCTCCAGCTCCAAATCGG--AATCGTCTACC 145
consensus_9379#2      -----------------------------------------------------CCGCAGC 7
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ---------------------------CCGCCCACGCGTCCGATTCG--AACGATGTAAC 31
consensus_9379#5      TGCTTTAGAAGTGATCGATCAACCGCACAGAAAGTGTCCATTATTCG--AACGATGTAAC 127
consensus_9379#4      TCTGTTTCAAGCTCGCGTCCGATCGCGTCGATGAAGCTGCAGCCCCAGCATCCATCCATT 181
                                                                                  

consensus_9379#0      GGGTCAGGCAAAACGGTGCAAAGCACGGCGTCCGTTGCCTCCCGTTCGCCATCGTCCGCC 956
consensus_9379#1      GGGTCAGGCAAAACGGTGCAAAGCACGGCGTCCGTTGCTTCCCGTTCGCCATCGACCGCC 205
consensus_9379#2      GGAGCAAGATCGCAGTCGCCGCTGGGAAAG-TAGTTGCTGTTATCGGTGTGCCCCTTGTT 66
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      GGCAGGAAACATCCAGTGGCGCTCGTTTTG-CTGTGGA-GCAAGCTCTAATATAACACCC 89
consensus_9379#5      GGCAGGAAACATCCAGTGGCGCTCGTTTTG-CTGTGGA-GCAAGCTCTAATATAACACCC 185
consensus_9379#4      CATGTGGAGCGAAGCTGAAGGATGGCAAGG--TACCGAACCCGATCGAGAAGCTGCTGCA 239
                                                                                  

consensus_9379#0      TCGACCATTACGATAAGCTCGCAACGCAACAGTGGCGACTCGGGGCAG-TTGCAGCAGCA 1015
consensus_9379#1      TCTACCATTACGATAAGCTCGGAGCGCAACAGTGGCGACTCGGGGCAGCTTGCAGCAGCA 265
consensus_9379#2      GCCAGTGTTGATAGAAACGCGTTACACATCGTGTAAAGGCTTGCGCAG--TGTAGTATAA 124
consensus_9379#6      ----GCCCCGAGGCGAGCACGG-GCGTATC------AGTCTTGCGCAG--TGTAGTATAA 47
consensus_9379#3      GCTGATAATGGGTCGGATAAGACACGGACAG--CAATAGCTTGCGCAG--TGTAGTATAA 145
consensus_9379#5      GCTGATAATGGGTCGGATAAGACACGGACAG--CAATAGCTTGCGCAG--TGTAGTATAA 241
consensus_9379#4      CCAAGCGATGTGTCCGTGCCGCTACGCACCG--AACGGATGTACCTGGAAGTTTGTGCAG 297
                                          *   *  *                   *      *     

consensus_9379#0      GGCGCAATGGATAGCCGCCACTCTCTGTCGTCCATTAATCGCCTGACGAC-TCCACTGAC 1074
consensus_9379#1      GGCGCAATGGATAGCCGCCACTCGCTGTCGTCCATTAATCGCCTGACGAC-TCCACTGAC 324
consensus_9379#2      TCC----GGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGAT-T--AGTGCC 177
consensus_9379#6      TCCC---GGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGAT-T--AGTGCC 101
consensus_9379#3      TCC----GGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGAT-T--AGTGCC 198
consensus_9379#5      TCC----GGACTGTCTACCAGACGGGAAGTGCTGTTACACATACGTCGAT-T--AGTGCC 294
consensus_9379#4      AGCGAGATGGACGCGCACTTGGTCGAGTGT-CGCTTCCGGCCGTACCGATGTGTGGCTGC 356
                        *     *        *             *  **          ***  *       *

consensus_9379#0      GCCGTTCGAAAAGCCAGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGT 1134
consensus_9379#1      GCCGTTCGAAAAGCCGGAACAGTGTCCGCTGATGACGCCTTCCATCAACAAGCACGATGT 384
consensus_9379#2      TCCGATGTTGAAGCTTGGACC-AAGTGGCTGAAATTAC-GATAAGGAAGAAGCTCTGTGC 235
consensus_9379#6      TCCGATGTTGAAGCTTGGACCCAAGTGGCTGAAATTACCGATAAGGAAGAAGCTCTGTGC 161
consensus_9379#3      TCCGATGTTGAAGCTTGGACC-AAGTGGCTGAAATTAC-GATAAGGAAGAAGCTCTGTGC 256
consensus_9379#5      TCCGATGTTGAAGCTTGGACC-AAGTGGCTGAAATTAC-GATAAGG-------------- 338
consensus_9379#4      TTCGTTGAACGTGATCAAATGCAACTGGCAAGGTTTGCAGCACGAGATCGAGGACCATCT 416
                        ** *      *     *        **        *                      

consensus_9379#0      GGTGAGTGGTAGTGGTAGTGGTGGCGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGC 1194
consensus_9379#1      GGTGAGTGGTAGTGGTAGTGGTGGTGGTGGTATACGTGCTGCCCGGTCGAAGCAGAACGC 444
consensus_9379#2      AAAAAAAA-----GGGATTAAAGC-AGGGTTGCC-AAAATGC-AAAACGGCAG--AAATG 285
consensus_9379#6      CAAAAAAAACAG-GGNATTAAAGCCAGGGTTGCCCAAAATGGGAAAACGGCCAGCAAATG 220
consensus_9379#3      AAAAAAAA-----GGGATTAAAGC-AGGGTTGCC-AAAATGC-AAAACGGCAG--AAATG 306
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      AGCGAAGGGCCACAAAGAGCTGGGCGAGGTGTTCCGGTTCCGCGAGAGCACCTCGCTCGT 476
                                                                                  

consensus_9379#0      GATCGACAAAAAGCTTGCCTTTCACCGATACATGCAAGAATCTCGCAAAGGGAAGAAGTA 1254
consensus_9379#1      GATCGACAAAAAGCTTGCCTTTCACCGATNCATGCAAGAATCTCGCAAAGGGAAGAAGTA 504
consensus_9379#2      --TCAATGC-GTGATTTGTGTTGCC--AAACAGCGAAGTAGCCATTGGAAGGCCGTCAGT 340
consensus_9379#6      GTCCAAAGCCGTGATTTGTGTTGCCCAAACCAGCG------------------------- 255
consensus_9379#3      --TCAATGC-GTGATTTGTGTTGCC--AAACAGCGAAGTAGCCATTGGAAGGCCGTCAGT 361
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      GTTCAAGGAGCAGATCTCGCTCGGCGGTCTCAAGCTGGTCGATGCGTTCAGCAAGCGCTT 536
                                                                                  

consensus_9379#0      GAGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTC 1314
consensus_9379#1      -AGTGTGTGCCCTTCGTTCGTCACCCATCGTAACGTCTGCTCCTCATCTGCTTCGTGTTC 563
consensus_9379#2      GCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAA-TTCGCAATT 399
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      GCGCGAGTGAAAGTGTGCATCTGCGTTCCTCTAGAGGTGGTTCTCAGGAA-TTCGCAATT 420
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      CCTGTTCTACTTCTTCTCGGACGTCGCCCACAAGAAGCTCTCCTTTCTGATGCTTTACTT 596
                                                                                  

consensus_9379#0      GTTTTTTATCT------------------------------------------------- 1325
consensus_9379#1      GTTTTTTATCTGTACGTTTATGTGTGTGTGTGTGTCTGTGTGCGTCTTTCAACACAGCGC 623
consensus_9379#2      GCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGT---------------CGCTGT 444
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      GCCGATTGCTGAGCGGGATATCACCGTTAAAATCCCTGT---------------CGCTGT 465
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      CGGGCGGCGCGANGANGCGGCCCAGTACTGCTACGAGCTGGAGATTAGCCGGCCGACCGT 656
                                                                                  

consensus_9379#0      ----------------------------------------------------------CC 1327
consensus_9379#1      CTACTATTTGAATTTTGTATCGTGACCCCGCCCCGATTCCTGCCTCCTCCCGTTGCAGCC 683
consensus_9379#2      GGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGG 504
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      GGACAGAGTATAATTGGTTAGTTGATTCCTGCATAACCTACAACGACAATGGAAAACTGG 525
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      TTGCGCCACCCGCCAATGGGAC-------------------------------------- 678
                                                                                  

consensus_9379#0      ACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAG-TTCGCCTACCACACCAGCACCGA 1386
consensus_9379#1      ACCCTCGTGGAGCGTTTCGCAAACCACGACGAGCAGCTTCGCCTACCACACCAGCACCGA 743
consensus_9379#2      AGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACC-AGTGTGCTGCCAAGGA 563
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      AGATGTAAGCAGTGTTGCAATTTCCCGAACGGGGAGGTGTACC-AGTGTGCTGCCAAGGA 584
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTC 1446
consensus_9379#1      GTACCATCGGCAGGTGTACGGACACGAGCCGTACCGCATCTCGCGCCATTATCCACCGTC 803
consensus_9379#2      TCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGC 623
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      TCACTTTTACTGCGCCGCTTGCAAGGAGTCAAAGAACAGGACGCTATGTACGTGTGGAGC 644
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      CGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGA 1506
consensus_9379#1      CGAGTGTACGACCACGGCGGCCGTCTGTCAGAAGTACACGCAGCCGTACAAGGTGAAGGA 863
consensus_9379#2      GAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGAAGCTGCTGCACCAGGCGATGTG 683
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      GAAGCTGAAGGATGGCAAGGTACCGAACCCGATCGAGA---------------------- 682
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      CGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTG 1566
consensus_9379#1      CGATCGGCCGTACCTGCTGAAGCAGCCGACGAACTGTCTGTTCAAACCGCAACCCAAGTG 923
consensus_9379#2      TCCG-------------------------------------------------------- 687
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGTTGGAGTGCGTAAACGCC 1626
consensus_9379#1      GTGTGGCGGAGCTAGTGCCGGTGTAGGTCACGGAAAGGGTGGNTGGAGTGCGTAAACGCC 983
consensus_9379#2      ------------------------------------------------------------
consensus_9379#6      ------------------------------------------------------------
consensus_9379#3      ------------------------------------------------------------
consensus_9379#5      ------------------------------------------------------------
consensus_9379#4      ------------------------------------------------------------
                                                                                  

consensus_9379#0      CCAG--------------------------------------------- 1630
consensus_9379#1      CCCAGCTGTGGTCGAATTTTCAGCTTCCCACACTAATAAACTACTCATT 1032
consensus_9379#2      -------------------------------------------------
consensus_9379#6      -------------------------------------------------
consensus_9379#3      -------------------------------------------------
consensus_9379#5      -------------------------------------------------
consensus_9379#4      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)