These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9383#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1896 fasta sequence [GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA-TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG-CCCCAGGTAGTAGAGGAAGCGGGCACACTCG-TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGG--GCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC-GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTGTGCGAA] [+] EMBL BM644420 [GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTG ] [+] EMBL CNS08L6N [ ttttTAGAAATTGTTGCAGTGCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCTTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCGGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTTCGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGAACCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTTAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCCCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGT ] [+] EMBL CNS08G3Y [ GTTGCAGTTCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGACCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCA ] [+] EMBL CNS093T7 [ TCCTATCTTTATTATTCAAAAAAGGGAAATACGCA TTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTT ] [+] EMBL CNS08NY0 [ TATTCAAAAAAGGGAAATACGCATTTTTGCACGACGAACAAACCATTAAATGAACCTATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACACCAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGAATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTTCCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCGCCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTTGTTGCTGGCCGTTTCCGGAAACACCGAC ] [-] EMBL BM602186 [ ATCCAGACAGAACGATATGCGCTGATGGAAAGCGAGCTGCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGGGATCGAGCGTGGCCTCGATCACGCCGTCGCGGATTGCCTTCGCCACGATGAACTCGGCGTCTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACGCCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCTTGAGTAAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCGGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACAGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGTTGCTTGTGCGCCACACTGTACTCCAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGcgg ] [+] EMBL BM646738 [ CCGGGCCGATCGAACGGATCGCCGTCTTAATGACGTTGTGCCGCAAGCGAATGATCAGCGTGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCTGCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCAGTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGATCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTGTACTCTAGCTTGGCCGCCTTGATGCG CCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGG ] [-] EMBL CNS08NXZ [ CGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCCAGGTAGTAGAGGAAGCGGGCACACTCG TTGTTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGG GTCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTAT ] [-] EMBL BX602143 [ GAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTAC ] [-] EMBL CNS08L6M [ ggtggTTGGGCAGATGGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCA CTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTGTGCGAA] [-] EMBL BM607084 [ TGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTCCGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGTGTGTGTTTTcgg ] consensusID : consensus_9383#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 855 fasta sequence [CGTCTGGCGGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG-CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT-GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG-TCCGCGTCTTTCTTT-GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC-GGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCG-CAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGTCGGCGATTCTG] [-] EMBL CNS08G3X [CGTCTGGCGGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCACACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTT GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGAC GGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCG CAGGGGGTTT ] [-] EMBL CNS096GS [ CAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCG CAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTT GTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG TCCGCGTCTTTCTTT GCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA ] [-] EMBL AL696334 [ cgtTCGAAAGCGAACGCAGCACGCGCCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGGTCGATCTGTCGGGCAT GTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGAT GGGTC GCT GGGC GCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCC TTTACGCTGCACTCCGAGATGTGCCGCCAGGGGGTTTTTTCGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGTCGGCGATTCTG] consensusID : consensus_9383#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 654 fasta sequence [GCCGCAATCAGATCCAGCGATCGCGGTTCTGCCCGACCACGCTTCGCCATCAGATCCTGNGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTCACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA] [-] EMBL AL933775 [GCCGCAATCAGATCCAGCGATCGCGGTTCTGCCCGACCACGCTTCGCCATCAGATCCTGNGAGCATTTGGTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGGCCGGATAGTCCTCGATGTACGCCATTATGCCATCACGCTCCGGTCCGGCCGGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCGATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCGGCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCCGCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACACACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTTCGCAAATGCTCACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA] consensusID : consensus_9383#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence [AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGTCCGGATAGTCCTCGATGTACGCCATTATGCCGTCACGCTCCGGTCCGGCCGGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCGCGGACGCGTGGGCGG] [-] EMBL BM601327 [AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGTAGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCACCTTCGCCATCAGATCCTGCGAGCATTTGGTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGGCGCACCAGCAGCAGCAGATGGAAGTAAGCGTCCACCTCCGGCACCGGGTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGTCCGGATAGTCCTCGATGTACGCCATTATGCCGTCACGCTCCGGTCCGGCCGGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTCGGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCGCGGACGCGTGGGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GACCCACGCGTCCGCCTTTTTTTTTTTTTTTAGGTGTAGAAATTGTTGCAGTTCCTATCT 60 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 TTATTATTCAAAAAAGGGAAATACGCATTTTGCACGACGAACAAACCATTAAATGAACCT 120 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 ATTTCTGGAGTTTGTGTTCTGTAAGTTACGCTCTTCAACACTCCAAACGCTTGGATACAC 180 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CAGGGCGCATAGCTTTTCTCTGATGTTGATGTTCCTTTTTTTTGCTGCCGAGTGCTTAGA 240 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 ATCCATCGTCATCCTCCTCGGCCATCTCCTTCGCCAGCTCTAGATCCTGCTGCTCCCGTT 300 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CCCGTCTCTCCTCGGCGCTTTCCAGCTCCTTTCCGTACGACTTGGGCGGGTAGCGCATCG 360 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CCTTCACGCTCTGATTGTGCAGATCCAGACAGAACGAAATGCGCTGATGGAAAGCGAGCT 420 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GCGGTTCACGGGTCGAGTAGATGTCGGTGCTCTCCTTGCTGCGCATGTACCCCTTCTCGG 480 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GATCGAGCGTGGCCTCGATCACGCCGTCGCGGATCGCCTTCGCCACGATGAACTCGGCGT 540 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CTTCGGGCGAATCCAGGCCCAGCTTGCGCGCAATATCCTGCGGGCTGATGCGCGAGTACG 600 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CCAGGCCGATCGAACGGATCGCCGTCTTGATGACGTTGTGCCGCAAGCGAATGATCAGCG 660 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 TGAACGTGTGATCCTGACGGAACTGTTCGCCAAAGTTAACCAGCACCTCGCCGAAACGCT 720 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GCAGATTGCCCATCCGCACCGCCTGAGTGAGCTGGAAGTAGGGGCCGAGCGAGCGGCGCA 780 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GTGCAGCCTGTCGGAACACCTTCCGCTCGGGTATATCGCCAAGCAGCAGCTCCACCACGA 840 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 TCACCAGCTTTTGCACCGTCTGGCGGAATCCGACGGCGGCCTGCTGGGGTGCTTTCCGCA 900 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GCGCCTGTACCAGCTGCTTGTGCGCGACACTATACTCTAGCTTGGCCGCCTTGATGCGCC 960 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CCAGGTAGTAGAGGAAGCGGGCACACTCGTTGTTGCTGGCCGTTTCCGGAAACACCGACT 1020 consensus_9383#1 ------------------------------------------------------------ consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 TGTTCACCAGCTTGTCCGCCTGATCGTACAGCGAGTAGTGCAGATAGTTGCGTAGCAGAC 1080 consensus_9383#1 ----------------------------------------------------CGTCTGGC 8 consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 AGTTGATCAGCACCGCCTGGCCCTCGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGG 1140 consensus_9383#1 GGAATCCGACGGTGGCCTGCTGGGGTGCTTTCCGCAGCGCCTGTACCAGCTGCTTGTGCG 68 consensus_9383#2 ------------------------------------------------------------ consensus_9383#3 ---------------------------AATCGTTGTTCAGTTCGGCCACCCGCGAGTGGT 33 consensus_9383#0 AGTGTAGGAACGAGCGAATACTTTCCAAATCGTTGTTCAGTTCGGCCACCCGCGAGTGGT 1200 consensus_9383#1 CGACACTATACTCTAGCTTGGCCGCCTTGATGCGCCCCAGGTAGTAGAGGAAGCGGGCAC 128 consensus_9383#2 --------------GCCGCAATCAGATCCAGCGAT-CGCGGTTCTGCCCGACCACG-CTT 44 consensus_9383#3 AGAAGTAGCTCTTGGCCGCAATAAGATCCAGCGATATGCGGTTCTGTCCGACCAC--CTT 91 consensus_9383#0 AGAAGTAGCTCTTGGCCGCAATCAGATCCAGCGATCGGCGGTTCTGCCCGACCAC--CTT 1258 consensus_9383#1 ACTCGTTGCTGCTGGCCGTTTCCGGAAACACCGACTTGTTCACCAGCTTGTCCGCCTGAT 188 **** ** ** *** * * * * ** * * consensus_9383#2 CGC-CATCAGATCCTGNGAGCATTTG-GTCGCCTTCGGCAGATCGTTCTTGTCCAGCAGG 102 consensus_9383#3 CGC-CATCAGATCCTGCGAGCATTTG-GTCGCGTTCGGCAGATCGTTCTTGTCCAGCAGG 149 consensus_9383#0 CGC-CATCAGATCCTGCGAGCATTTG-G--GCCTTCGGCAGATCGTTCTTGTCCAGCAGG 1314 consensus_9383#1 CGTACAGCGAGTAGTGCAGATAGTTGCGCAGCAGACAGTTGATCAGCACCGCCTGGCCCT 248 ** ** * * ** * *** * ** * * **** * * ** consensus_9383#2 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 140 consensus_9383#3 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 187 consensus_9383#0 CGCA-----CCAGCAGCA---------GCAGATGGAAGTA--------AGCGTCCACCTC 1352 consensus_9383#1 CGAAATCGTTCCGCAGTGTGGCCGTACGCAGCCGGGAGTGTAGGAACGAGCGAATACTTT 308 ** * * **** **** ** *** **** ** * consensus_9383#2 CGGCACCGG-GCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGG 199 consensus_9383#3 CGGCACCGG-GTTCTTGATGGCGGTGCGGGGACGGGGCAGCTCCGGCTCCTGCGCCCCGT 246 consensus_9383#0 CGGCACCGG-GCTCTTGATGGCGGCGCGGGGACGAGGCAGCTCCGGCTCCTGCGCTCCGG 1411 consensus_9383#1 CCAAATCGTTGTTCAGTTCGGCCACCCGCGAGT--GGTAGAAGTAGCTCTTG-GCCGCAA 365 * * ** * ** *** ** * ** ** **** ** ** * consensus_9383#2 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCATCACGCTCCGGTCCGGCC 249 consensus_9383#3 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCGTCACGCTCCGGTCCGGCC 296 consensus_9383#0 CCGGAT--AGTCCTCGATG----TACGCCATTAT----GCCATCACGCTCCGGTCCGGCC 1461 consensus_9383#1 TCAGATCCAGCGATCGGCGGTTCTGCCCGACCACCTTCGCCATCACGCTCCGGTCCGGCC 425 * *** ** *** * * * * * * *** ****************** consensus_9383#2 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 309 consensus_9383#3 GGGTACAGCTGCGCGGCCAGTGAGCGCACCACCACCAGCGCCAGCTTCCGGCGCGTCGTC 356 consensus_9383#0 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 1521 consensus_9383#1 GGGTACAGCTGCACGGCCAGCGAGCGCACCACCACCAGCGCCAGCTTGCGGCGCGTCGTC 485 ************ ******* ************************** ************ consensus_9383#2 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 369 consensus_9383#3 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCGCGTCCGCCTTGTCG 416 consensus_9383#0 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 1581 consensus_9383#1 GGAAGCGAACGCAGCACGCGCAGTATGAAGCGCGGCTCCTTGCTCACGACCGCCTTGTCG 545 ********************************************* ** *********** consensus_9383#2 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCG 429 consensus_9383#3 ------CGGACGCGTGGGCGG--------------------------------------- 431 consensus_9383#0 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAGCTCCGCGTCTTTCTTTGCG 1641 consensus_9383#1 ATCTGTCGGGCATGGTCACGGATTTCCTGGACCGCCAGCAG-TCCGCGTCTTTCTTTGCG 604 *** * * *** consensus_9383#2 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 489 consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 1701 consensus_9383#1 GCCTCCGCATCTTCGGCACTTTCCATCTCCACATCCACGATGGGGTCGGCTGGGGCGGCC 664 consensus_9383#2 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 549 consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 1761 consensus_9383#1 GCTGCTGCAGTCTGCGAAACCATCGCTGAAACGGACGACAAACAATTCTTTTATCACACA 724 consensus_9383#2 CACGACGGGCTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 609 consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CACGACGG-CTACGCTTATCCTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 1820 consensus_9383#1 CACGACGGCTACGCTTATCCTTTTACGCTGCACTCCGAGATGTGCCGCAGGGGGTTTTTT 784 consensus_9383#2 CGCAAATGCT-CACAAAGAGTAGCGAGATTATTTTAACCTCGGGNA-------------- 654 consensus_9383#3 ------------------------------------------------------------ consensus_9383#0 CGCAAATGCTTCACAAAGAGTAGCGAGATTTATTCGCGATGCACGGACGATGTGTTTTGT 1880 consensus_9383#1 CGCAAATGCTTCACAAAGAGTAGCGAGATTATTCGCGATGCACGACGATGTGTTTACCGT 844 consensus_9383#2 ---------------- consensus_9383#3 ---------------- consensus_9383#0 GTGTGTTTTGTGCGAA 1896 consensus_9383#1 CGGCGATTCTG----- 855 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||