These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9389#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1328 fasta sequence [TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG-TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG-CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG-ATCGCTGTAAG-ATATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG-CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGCAGAAAAAAAAAAAAA] [+] EMBL CNS08L19 [TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGTATCGCTGTAAG ATGTCCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCA CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTGTGACGAACGGCAGCT ] [+] EMBL CNS09OTH [ CACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTGAGCGTTGGGGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG ATATACGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTGTAGTCGGCATAACGAAAATATCGT ] [+] EMBL CNS09GD4 [ TTC GAATGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACGCGGTTCAGTTCTGGTCCATACCATTGCATAAG TTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAGCAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTA ] [+] EMBL CNS08CEK [ AGTGAACAGAAAAGCAATCGTTTCACCGCTGCCTATTACACGGTTCAGTTCTGATCCATACCATTGCATCAG TTGCAAAGCCCCCATATAAGAAGACCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTATCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAGCAT TTCGCACGGTTGCATCCAGCTGTTTAACGTTGAG ] [+] EMBL CNS08LDO [ TGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGCTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACGTATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCCCGGCGATGAAACCGAGGAGCGTAA ] [+] EMBL CNS08MLU [ ATTAAATATCGCAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAACACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG ATTCGCACGGTTGCATCCAGCTGTTGAACGTTGA ] [-] EMBL CNS08L1A [ GTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGAAACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTG CGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG ATCGCTGTAAG CGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGCAGAAAAAAAAAAAAA] [-] EMBL CNS08LDP [ GCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCCCCGCCTTCAAATAACTCACACAGATGGAATCTATTTGG CAGGTGGCGACGATTGCT ] [-] EMBL CNS08MLV [ agCGGTTCCGCCGCCTTCAAATTACTCACACAGATGGAATCTATTTGGTCAGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTGACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGC ] consensusID : consensus_9389#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1326 fasta sequence [TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGATCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCTCAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT-CGGCGGGAGTCAC-CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAAGTAACTGTAGCTTAGCTAGGTTAATAAATATACG] [+] EMBL BX628347 [TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGATCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCTCAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACng ] [+] EMBL AGA281959 [ CATCCTAACAAAAAGAACCGTCAAACACGTGTTCCGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGGCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAA ] [-] EMBL CNS08CEL [ caAACCACAGACAAC GGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCCGGCGGGAGTTAC CTCTCTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGTTACGGTTGTGATTGGCAACAGGTAGAGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACATGCTCGTTTTACGATCATAAACTATGCGTATCGGAAGTAACTGTAGCTTA ] [-] EMBL CNS09GD5 [ GCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT CGGCGGGAGTCAC CTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGG ] [-] EMBL CNS09A3J [ GCCCGAGGGAAAACGGAGCGCGGGAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACT CGGCGGGAGTCACACTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACG] consensusID : consensus_9389#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 868 fasta sequence [CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAG] [+] EMBL CNS09A3I [CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTCCATACCATTGCATAAGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAGCCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAG] consensusID : consensus_9389#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 493 fasta sequence [AGAATCCCCCCGAGGTTGATTTGGATTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACAT] [+] EMBL AL694667 [AGAATCCCCCCGAGGTTGATTTGGATTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATACCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCCCACCAATGGGTAAATTAAATATCGAAACTATAACCTCACACGACACCGAACAACCGGCCGATTCGATCGAATGGTGTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACCAGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAGGCCGAATACTATTGTACCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9389#0 ------------------------------------------------------------ consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 TTGAACAGAAAAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTAAGTGA 60 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 ---------------TGGATGTTCCCCCCTTCTATCGTCACGGTTCGGAGTGAACAGAA- 44 consensus_9389#3 ------------------AGAATCCCCCC----GAGGT--TGATTTGGATTGAACAGAA- 35 consensus_9389#1 TCTTGCAAAAGTCTATGGGCAATCAGCTAATGAATGGCACCATCCGATGATGAGCTGGCT 120 consensus_9389#2 -----------------CCCTGTTCTCTGTTCTATCGTCACGGTTCGGAGTGAACAGAA- 42 * * * *** * * consensus_9389#0 -AAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTC----------CATA 93 consensus_9389#3 -AAGCAATCGTTTCGCCGCTGCCTATTACACCGTTCAGATCTGGTCACCATTAGGCCATA 94 consensus_9389#1 CAATTACACATCCTAACAAAAAGAACCGTAAAACACGTGTTCCGTCACCATTAGGCCATA 180 consensus_9389#2 -AAGCAATCGTTTCGCCGCTGCCTATTACACGGTTCAGTTCTGGTC----------CATA 91 ** * * * * * * * * *** **** consensus_9389#0 CCATTGCATA---------AGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 142 consensus_9389#3 CCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 152 consensus_9389#1 CCATTGCATCCATTGCATCAGTTGCAAAGCCCCCGTATTAGTAGGCCC--CACCAATGGG 238 consensus_9389#2 CCATTGCATA---------AGTTGCAAAGCCCCCGTATTAGTAGGCCGAATACTATTGTA 142 ********* **************************** ** * ** consensus_9389#0 TAAATTAAATATCGCAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 193 consensus_9389#3 TAAATTAAATATCGAAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 203 consensus_9389#1 TAAATTAAATATCGAAAC---------TATAACCTCACACGACACCGAACAACCGGCCGA 289 consensus_9389#2 CCGGTTCGGTGCTGGACCGGACGGTGGTGGACCTACGGATGATACGCTCTCGCTCCTACA 202 ** * * * * * * * * * ** ** * * consensus_9389#0 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 252 consensus_9389#3 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 262 consensus_9389#1 TTCGATCGAATGGT-GTCCGCACGACGGCTGGCAGGACGTATTCGTATGCGGCACCTACC 348 consensus_9389#2 AACGATTGACAGGTCGGCCGTTTTAGATCAAAAATGGAACCCACGGACAAACCATCAACT 262 **** ** *** * *** * * * * ** * ** * ** consensus_9389#0 AGCACGAGCGCGATGAAGAACCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 311 consensus_9389#3 AGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 321 consensus_9389#1 AGCACGAGCGCGATAAAGATCCGTCCTCCGCAAATCGAGTAG-GCCGAATACTATTGTAC 407 consensus_9389#2 GGCGGTGGC-CGGTGCCGATGGAACGCTAGCACTCTACGCCCTGTCCGACACATCCGGAC 321 ** ** ** * ** * *** * * * * ** * ** consensus_9389#0 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 359 consensus_9389#3 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 369 consensus_9389#1 CGGTTCGGTGCTGGAC-CGGACGGTGGTGG-ACCTACGGATGATACGCTC---------- 455 consensus_9389#2 AGCTTCAGCTCGAACCACAGATAACGGCAACGCTTGCGGGCGATGAAACCGAGGAGCGTA 381 * *** * * * * ** ** * * *** *** * consensus_9389#0 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 415 consensus_9389#3 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 425 consensus_9389#1 --TCGCTCCTACAAACGATTGACAGGTCGGCCGTTTTAGATCAAA--AATGGAACCCACG 511 consensus_9389#2 ATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGGATCGCTGTAAGATCTC 441 * * ** **** ***** *** * * * * * ** ** consensus_9389#0 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 474 consensus_9389#3 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 484 consensus_9389#1 GACAAACCATCAACTGGCGGTGGCCGGTGCCGATGGAACGCTAGCACTCTACGCC-CTGT 570 consensus_9389#2 GCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGT-CTCCAGC-CCGTGCACAGCTGG 499 * * * * ** ** ** ***** * * *** * * * * *** consensus_9389#0 CCGACACATCCGGACAGCTTCAGCTCGAACCACAGATAACGG-CAACGCTTGCGGGCGAT 533 consensus_9389#3 CCGACACAT--------------------------------------------------- 493 consensus_9389#1 CCGACACATCCGGACAGCTTCAGCTCGAACCACAGACAACNGGCAACGCTTGCGGGCGAT 630 consensus_9389#2 AAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCATAACGAAAATATCGTC 559 * ** consensus_9389#0 GAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG 593 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 GAAACCGAGGAGCGTAATCTGTTAGCGTTGGCGCTTGATTGGTCGCCCGATGGAAAACGG 690 consensus_9389#2 TTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGCTGTCCGGGCGAACCG 619 consensus_9389#0 ATCGCTGTAAGATATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAG 653 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 ATCGCTGTAAGCGATTCGCACGGTTGCATCCAGCTGTTGAACGTTGAGGATGGTCTCCAG 750 consensus_9389#2 ATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCTTTACTGTCCTTTGCC 679 consensus_9389#0 CCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCAT 713 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 CCCGTGCACAGCTGGAAGGTGCACGGGTTTGAAGCGTGGACGTGTGCGTTTAGTCGGCAT 810 consensus_9389#2 GGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTACGTCTGTTTGACGAA 739 consensus_9389#0 AACGAAAATATCGTCTTCAGTGGTAAGTGAATGGAATTGCTTACCGACGGTTCCGCCGCC 773 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 AACGAAAATATCGTCTTCAGTGGTGGCGACGATTGCTTTCTGTGTGCGCACGACGTACGC 870 consensus_9389#2 CGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGCGTCTGGCGCTTGCGG 799 consensus_9389#0 TTCAAATTACTCACACAGATGGAATCTATTTGGCAGGTGGCGACGATTGCTTTCTGTGTG 833 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 TGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGGCGGGAGTCACCTCT 930 consensus_9389#2 TCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATGTATCATAACTTTAGC 859 consensus_9389#0 CGCACGACGTACGCTGTCCGGGCGAACCGATCATGAAGGGTAAAAATAAAACTCACTCGG 893 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 TTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCTACGATGAAAACGTA 990 consensus_9389#2 GTGGTTCAG--------------------------------------------------- 868 consensus_9389#0 CGGGAGTCACCTCTTTACTGTCCTTTGCCGGGCGGGATCACATTCTACTCACCGGAAGCT 953 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 CGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGCCGCTGCACGGTGGC 1050 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 ACGATGAAAACGTACGTCTGTTTGACGAACGGCAGCTGAAGTGTAGCGTTTCCGAACTGC 1013 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 GTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTCTGTGCGCCTGCATG 1110 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 CGCTGCACGGTGGCGTCTGGCGCTTGCGGTCGAATCCACTCCGCGAGCCGGATGCAATTC 1073 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 TATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCGAGCTGGTTGGAGTG 1170 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 TGTGCGCCTGCATGTATCATAACTTTAGCGTGGTTCAGCTTAATGCAGACGATTCGTTCG 1133 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 TACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGGTGGGGAAAGGCTAC 1230 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 AGCTGGTTGGAGTGTACGGGGAACATGAGAGCATCTGCTATGGTTGTGATTGGCAACAGG 1193 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 GTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAAACTATGCGTATCGG 1290 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 TGGGGAAAGGCTACGTTCCGGTAGAAACGTGATAGCGACTTGCTCGTTTTACGATCATAA 1253 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 AAGTAACTGTAGCTTAGCTAGGTTAATAAATATACG------------------------ 1326 consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 ACTATGCGTATCGGAGGTAACTGTAGCTTAGCTAGGTTAATAAATATACGAACGGGGCGC 1313 consensus_9389#3 ------------------------------------------------------------ consensus_9389#1 ------------------------------------------------------------ consensus_9389#2 ------------------------------------------------------------ consensus_9389#0 AGAAAAAAAAAAAAA 1328 consensus_9389#3 --------------- consensus_9389#1 --------------- consensus_9389#2 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||