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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9393#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1221 fasta sequence
[CCGGTCAAGCGCGAGCTGCCAAATCGTGTAGCGTTCATTTGTGGAAACAGAAAAGCTGTGCATCTTCCCCGATCTCCGTTGTAAAAATCTACGAAATTGC-AAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC-GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC-TTTGCCGATGTTTACAAGGATGGTACGGG-AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC--CGGTTTCGCTCACA-CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT-CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGAATTTATA-GTTTCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTATCTGCGATCGGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTTGCTTCTTAAATGCCGAAAACACATAAA]
[+] EMBL BM576487 [CCGGTCAAGCGCGAGCTGCCAAATCGTGTAGCGTTCATTTGTGGAAACAGAAAAGCTGTGCATCTTCCCCGATCTCCGTTGTAAAAATCTACGAAATCGC AAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTAAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCATCTGGTTCGTGGCAGGATCTGAAGGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGCACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTC ]
[+] EMBL BM590867 [ ccGCGCGAGCTGCCAAATCGTGTAGCGTTCATTTGTGGAAACATAAAAGCTGTGCATCTTCCTCGATCTCCGTTGTAAAAATCTACGAAATTGC AAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCACAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCTAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTATCGCGGCAGCCGTCAAGGGAACAGCGACCGTAACAG ]
[+] EMBL BM617399 [ ccgGCGTTCATTTGTGGAAACAGAAAAGCTGTGCATCTTCCCCGATCTCCGTTGTAAAAATCTACGAAATCGC AAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTAAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCATCTGGTTCGTGGCAGGATCTGAAGGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGCACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTC ]
[+] EMBL BM591346 [ ccGAAAAGCTGTGCATCTTCCTCGATCTCCGTTGTAAAAATCTACGAAATTGC AAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTATCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACCGGGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGCTTTTGCCGATGTTTACAAGGATGGTACGGGAAGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACACCGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAG ]
[+] EMBL BX623634 [ TTGTAAAAATCTACGAAATTGCAAAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTTGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTGGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGNTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACG ]
[+] EMBL CNS08RE5 [ AAAAATCTACGAAATTGC AAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTTGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTA GTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAG ]
[+] EMBL CNS08VRK [ AAAAATCTACGAAATTGCAAAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGGCCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCA ]
[+] EMBL CNS08Z5I [ AAAAATCTACGAAATTGCAAAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGCGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTA GTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTTTTTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGA ]
[+] EMBL CNS08MI7 [ AAAAATCTACGAAATTGCAAAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTCCCTGTGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC ]
[+] EMBL CNS08SYG [ AAAAATCTACGAAATTGCAAAAAAAAAAATGTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTAATCGTAACAACCGGGGACCACC GGCCCGTA GTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTT ]
[-] EMBL CNS08Z5J [ TCCGCCATTTGCTTTTGTCGAGTTTGAGTATGCACGTGACGCTGAAAATGCGGCGAAGGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCTTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCCCGCGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGAATTTATA GTTTCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTATCTGCGATCTGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTTGCTTCTTAAATGCCGAAAACACATAAA]
[-] EMBL CNS08ZZR [ TTGCTTTTGTCGAGTTTGAGAATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCTTTTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATTTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGAATTTATAGGTTTCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTATCTGCGATCGGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTT ]
[-] EMBL CNS08RE6 [ GGAAAAGCGAACGTAAAAGTAGGGGTGGTGATCGTAACAACCGGGGACCACC GGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGC TTTGCCGATGTTTACAAGGATGGTACGGG AGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCC CGGTTTCGCTCACA CGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGATCCCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGAATTTATA GTTTCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTATCTGCGATCGGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTTGCTTCTTAAAT ]
[-] EMBL CNS08MI8 [ ACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGGTCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGAT CCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATGTTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCGGTAGTGTGCATTTTAGAATTTATA GTTTCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTATCTGCGATCGGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTTGCTTCTTAAATG ]
consensusID : consensus_9393#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 961 fasta sequence
[GTAAAAATCTACGAAATTGCAAAAAAAAAAAATGCTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACCGGCCCGTA-GTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGCTTTGCCGATGTTTACAAGGATGGTACGGGAGTTGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCCCGGTTTCGCTCACACGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGATCCCGTTCACGCTCGTACAATTGAACCAGTTTTACGTAAATTAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATTAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCCGGTAGTGTGCATTTTAGAATTTATAGTTTCACGTGTGACGGGTTGCTATCACAATCAGTA]
[+] EMBL CNS08PLI [GTAAAAATCTACGAAATTGCAAAAAAAAAAAATGCTCTCACGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGATATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCGCGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAAAGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGGTGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACCGGCCCGTA GTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGCTTTGCCGATGTTTACAAGGATGGTACGGGAGTTGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCCCGGTTTCGCTCACACGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGATCCCGTTCACGCTCGTACAATTGAACCAGTTTTACGTAAATTAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATTAGTTC ]
[+] EMBL BM603832 [ ccgcgGACGCGTGGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGGTGATCGTAACAACCGGGGACCACCGGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGGATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGTGTGCTTTGCCGATGTTTACAAGGATGGTACGGGAGTGGTGGAGTTCCTGCGTCATGAAGACATGAAGTACGCGATAAAGAAACTTGACGATTCCCGGTTTCGCTCACACGAGGGCGAAGTTGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCGGGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACGGAGCGTTTCCCGATCCCGTTCACGCTCGTACAATTGAACCAGTTTTACGTAAATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCGGGAGAGTGATTGGCCATTTTTCTGCTTTTTTTAGTCTAACATACAGTTTGCATCGTGTTTTGTTTAAAGCGACAACCTCTGGACTCTTCCCGGTAGTGTGCATTTTAGAATTTATAGTTTCACGTGTGACGGGTTGCTATCACAATCAGTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9393#0 CCGGTCAAGCGCGAGCTGCCAAATCGTGTAGCGTTCATTTGTGGAAACAGAAAAGCTGTG 60
consensus_9393#1 ------------------------------------------------------------
consensus_9393#0 CATCTTCCCCGATCTCCGTTGTAAAAATCTACGAAATTGCAAAAAAAAAATGT---CTCA 117
consensus_9393#1 --------------------GTAAAAATCTACGAAATTGCAAAAAAAAAAAATGCTCTCA 40
****************************** * ****
consensus_9393#0 CGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGA 177
consensus_9393#1 CGGACGCAACGAGTGCCGAATCTATGTCGGTAATCTGCCGCCAGACATCAGAACCAAGGA 100
************************************************************
consensus_9393#0 TATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCG 237
consensus_9393#1 TATTCAAGATCTGTTCCACAAATTTGGCAAAGTGACGTTCGTCGATCTGAAAAACCGCCG 160
************************************************************
consensus_9393#0 CGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAA 297
consensus_9393#1 CGGTCCGCCATTTGCTTTTGTCGAGTTTGAGGATGCACGTGACGCTGACGATGCGGTGAA 220
************************************************************
consensus_9393#0 AGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGG 357
consensus_9393#1 AGCTCGCGACGGATATGACTACGATGGGTACCGATTGCGGGTAGAGTTCCCACGAGGCGG 280
************************************************************
consensus_9393#0 TGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGG 417
consensus_9393#1 TGGTCCCGGTAGCTACCGCGGCAGCCGCCAAGGGAACAGCGACCGTAACAGTAGGGGTGG 340
************************************************************
consensus_9393#0 TGATCGTAACAACCGGGGACCACCGGCCCGTAGGTCACAGTTCCGGGTGATGGTGACCGG 477
consensus_9393#1 TGATCGTAACAACCGGGGACCACCGGCCCGTAG-TCACAGTTCCGGGTGATGGTGACCGG 399
********************************* **************************
consensus_9393#0 ATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGT 537
consensus_9393#1 ATTACCATCGTCTGGCTCGTGGCAGGATCTGAAAGATCATATGCGTGAGGCCGGCGATGT 459
************************************************************
consensus_9393#0 GTGCTTTGCCGATGTTTACAAGGATGGTACGGGAGTGGTGGAGTTCCTGCGTCATGAAGA 597
consensus_9393#1 GTGCTTTGCCGATGTTTACAAGGATGGTACGGGAGTTGTGGAGTTCCTGCGTCATGAAGA 519
************************************ ***********************
consensus_9393#0 CATGAAGTACGCGATAAAGAAACTTGACGATTCCCGGTTTCGCTCACACGAGGGCGAAGT 657
consensus_9393#1 CATGAAGTACGCGATAAAGAAACTTGACGATTCCCGGTTTCGCTCACACGAGGGCGAAGT 579
************************************************************
consensus_9393#0 TGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCG 717
consensus_9393#1 TGCCTACATTCATGTACGTGAAGATTCCGGAAACGACGATTCCGGCAAGCGTGATTACCG 639
************************************************************
consensus_9393#0 GGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACG 777
consensus_9393#1 GGATAGATCCTACTCACCCCGCCGACGTAGAGGTTCGCCAACTTACTCGCCGGTACAACG 699
************************************************************
consensus_9393#0 GAGCGTTTCCCGATCCCGTTCACGCTCGTACAATTGAACCAGGTGAATGGCGCGGTTATG 837
consensus_9393#1 GAGCGTTTCCCGATCCCGTTCACGCTCGTACAATTGAACCAG------------------ 741
******************************************
consensus_9393#0 TTCCGAAGATGACTAAAGTAATTTAAACGCTAAATCTACTTCTATCTTCAGTTTTACGTA 897
consensus_9393#1 ---------------------------------------------------TTTTACGTA 750
*********
consensus_9393#0 AATGAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATGAGTTCGGTCTTTCTGGCG 957
consensus_9393#1 AATTAACACAGTACCGCCACACAAAAAGAGAGAGAGGGAATTAGTTCGGTCTTTCTGGCG 810
*** ************************************* ******************
consensus_9393#0 GGAGAGTGATTGGCCATTTTTCTGCTTTTTTTTAGTCTAACATACAGTTTGCATCGTGTT 1017
consensus_9393#1 GGAGAGTGATTGGCCATTTTTCTGCTTTTTTT-AGTCTAACATACAGTTTGCATCGTGTT 869
******************************** ***************************
consensus_9393#0 TTGTTTAAAGCGACAACCTCTGGACTCTTCC-GGTAGTGTGCATTTTAGAATTTATAGTT 1076
consensus_9393#1 TTGTTTAAAGCGACAACCTCTGGACTCTTCCCGGTAGTGTGCATTTTAGAATTTATAGTT 929
******************************* ****************************
consensus_9393#0 TCACGTGTGACGGTTTGCTATCACAATCAGTAGTGTTTAAGAGCATTTGTTTGTCGGTAT 1136
consensus_9393#1 TCACGTGTGACGGGTTGCTATCACAATCAGTA---------------------------- 961
************* ******************
consensus_9393#0 CTGCGATCGGTTAGATCTTAGAGGCAGGTTTTTAGGCTAAAGGAAAATAATTTCAGTTGC 1196
consensus_9393#1 ------------------------------------------------------------
consensus_9393#0 TTCTTAAATGCCGAAAACACATAAA 1221
consensus_9393#1 -------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||