These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9396#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1230 fasta sequence [TATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGACGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAACGTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG] [+] EMBL BX618904 [TATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTAC ] [+] EMBL BM575476 [ ccgGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGAT ] [+] EMBL BX620380 [ ACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGTTCGACGGGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGCTCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAANAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAA ATTGC ] [+] EMBL CF541789 [ GCGCCGGTTCGCTGCAACTGAAGCGTACGATGAAGCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTTGTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTACACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACCCGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCATCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGACGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAACGTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG] [+] EMBL BM610174 [ ccgATTGATTGTGAGCGCCGCGGCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGCAGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTCGTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCTATGGGGTGAGATGAGGTGGGTAAAGTAAACGTTTTTGATGAATCGTTAATTTATAAATGACGATATTTGCGATTAATGCTAATAATCGGTTTTCAAGAGATCAAAATAAAAATAATAAACGTTCTTACTAcg ] consensusID : consensus_9396#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 708 fasta sequence [CCGCCCACGCG-TCC-CG--CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA-ACGTGGCGTTCGACCGGGA-GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGA-TTTTGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG] [+] EMBL BM584364 [CCGCCCACGCG TCCGCGACCAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATCTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGTGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGGCG ] [+] EMBL BM628345 [ cCGCGATCG AC CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAG ] [+] EMBL BM600365 [ C CG CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGCCCATCCGTACGCCGCGATGAACAAACAGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGAGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTTCCGATGGGCTGTACCACTTCAACACGACACGTGGCGTTCGACCGGGAGGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGA TTTTGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG] [+] EMBL BM613029 [ C CG CAGCAACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGTGAAGTTTGGC ] [+] EMBL BM606520 [ GGTCGCCGTATCCCCGCTCCCGCAACCCCGATGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATG ] [+] EMBL BX601833 [ CGCCGTAGCCCCGCTCCCGTAACCCCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAAC ] [+] EMBL BM615509 [ ccgGTTGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGAATGGGGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGA ACGTGGCGTTCGACCGGGA GGGTGTGGTCGTGTCGCGG ] consensusID : consensus_9396#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 658 fasta sequence [CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACCCGCTGTGTCATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTTGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCTGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAACCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGGCGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCGCTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTGAGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCTGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTCGGGGAGGCCGGTATCGAACACGACCGTCTACCCGGAGATG] [+] EMBL AL931999 [CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACCCGCTGTGTCATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACTTGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCTGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAACCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGGCGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCGCTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTGAGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCTGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTCGGGGAGGCCGGTATCGAACACGACCGTCTACCCGGAGATG] consensusID : consensus_9396#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCGCGGACGCGTGGGCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATTACCGACT] [+] EMBL BM583914 [CCGCGGACGCGTGGGCTATTTTGCATTTTACTGCTGCTCGTTGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCCGGTGTGGTAGAGTTCAGCTCCGATCGTGTGGATGGCGAAACGGCCGAAACCAGCACGGCGAACCGTCTCGCCCAGTATCTATCGATTATAAACTCCCCCGAGGCGGACGCTACCGATGTGCTGGCATTTCCCGAGGGCACGCTGAACCGTGTGGCAACCGCTTCGTTCGTACCACACCCGAAGGATGCGATCGCACCGTGCAACATCCTTGAGTACGAGCCGGTCGTCCGGGACATTTCCTGTGCCGCACGCAACCGCAAAAAGTACGTCGTGATTAATCTGACCGAGAAGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGTGCCGATGGGCTGTACCACTTCAACACGAACGTGGCGTTCGACCGGGGAGGGTGTGGTCGTGTCGCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATCAACACGACCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGAAGTTTGGCCACTTTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATTACCGACT] consensusID : consensus_9396#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 352 fasta sequence [TGCCCTTCCTAACGGCGGCCCAGATCCAGCAGGGGTGGGCATTTTCGAACAACGTGAATCTGCTCGCGGCCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTCCGGTCGGCGCGGTGAGCTCACGACCGTCATGAACCACGAACCGCAAACCAAGCTTTATGTCGCACAGGTGCCCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTA] [+] EMBL BX602737 [TGCCCTTCCTAACGGCGGCCCAGATCCAGCAGGGGTGGGCATTTTCGAACAACGTGAATCTGCTCGCGGCCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTCCGGTCGGCGCGGTGAGCTCACGACCGTCATGAACCACGAACCGCAAACCAAGCTTTATGTCGCACAGGTGCCCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTA] consensusID : consensus_9396#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 292 fasta sequence [CAGANTACGGCACGAGGCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGNNCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGNTCNC] [+] EMBL BX619381 [CAGANTACGGCACGAGGCAAAATGACATTCCCGAATGCGGCGATTAACAAGATCCCGCAGCCGAAAGGTACGCCGGCCCAGATGGNNCCAAGCTCTACCTGAAGCGTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACTGCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGTCAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGGCCGTACGNTCNC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9396#1 CCGCCCACGCGTCCCGCAGC-AACCGAAGCGAAGGTCGCCGTAGCCCCGCTCCCGTAACC 59 consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ---CAGAATTGCCCCGAGGTTAAACGAAGNGAAGGTCTGCGTAGCCCCGCTCCCGTAACC 57 consensus_9396#0 ------------------------------------------------------------ consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 CCGCTGTGTCCATCCGTACGCCGCCATGAACAAACCGCCAGTCCTATTTTGCATTTTACT 119 consensus_9396#3 -----------------------CCGCGGAC-----GCGTGGGCTATTTTGCATTTTACT 32 consensus_9396#2 C-GCTGTGTC-ATCCGTACGCCGNCATGAACAAACCGCCAGTCCTATTTTGCATTTTACT 115 consensus_9396#0 ------------------------------------------------------------ consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 -GCTGCTCGT-TGCACCGAGCCTACAGATCTCCACGCCAGGCGATCCACACTATTGGGCC 177 consensus_9396#3 -GCTGCTCGT-TGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCC 90 consensus_9396#2 TGCTGCTCGTATGCACCGAGCATACAGATCTCTACGCCAGGCGATCCACACTATTGGGCC 175 consensus_9396#0 ---------------------------------------------------TATTGGGCC 9 consensus_9396#4 --------------------------------------------------------TGCC 4 consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGAATGG-CGAAACGG---CCGAAA 226 consensus_9396#3 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGGATGG-CGAAACGG---CCGAAA 139 consensus_9396#2 TGGTGTGGTAGATGTTCATGCTCCTGATCTGTGTTTGATTGCTCGAAACTGTGCCTGAAA 235 consensus_9396#0 -GGTGTGGTAGA-GTTCA-GCTCC-GATC---GTGTGGATGG-CGAAACGG---CCGAAA 58 consensus_9396#4 CTTCCTAACGGCGGCCCA-GATCC-AGCAGGGGTGGGCATTTTCGAACAAC---GTGAAT 59 consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 280 consensus_9396#3 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 193 consensus_9396#2 CCATGCACTGGCTGAACCTGTCTCGCCCAGTATCTATCNGATTATAAACTCCCCCGAGGG 295 consensus_9396#0 CCA-GCACGG--CGAACC-GTCTCGCCCAGTATCTATCG-ATTATAAACTCCCCCGAGG- 112 consensus_9396#4 CTGCTCGCGG-CCGGCGCTAGCTTCCCGGGGGTGGGCAGCACCGGTACGGGAATCTACTC 118 consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 337 consensus_9396#3 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 250 consensus_9396#2 CGGAGCGCTACCGATGTGCTGGCATTTTCCCGGAGGGCACNCTGAACCGTGTGGCAACCG 355 consensus_9396#0 CGGA-CGCTACCGATGTGCTGGCATTTCCC--GAGGGCACGCTGAACCGTGTGGCAACCG 169 consensus_9396#4 CGGTCGGCG--CGGTGAGCTCACGACCGTC----ATGAACCACGAACCGCAAACCAAGCT 172 consensus_9396#5 ----------------------------------------------------------CA 2 * consensus_9396#1 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 394 consensus_9396#3 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 307 consensus_9396#2 CTTCGTTCGTACCATACCCGAAGGATGCTGATCGCACCGTGCAACATCCTTGGAGTACTG 415 consensus_9396#0 CTTCGTTCGTACCACACCCGAAGGATGC-GATCGCACCGTGCAACATCCTTG-AGTAC-G 226 consensus_9396#4 TTATGT-CGCACAGGTGCCCAAAATGAC--ATTCCCGAATGCGGCGATT----AACAA-G 224 consensus_9396#5 GANTAC-GGCACGAGG---CAAAATGAC--ATTCCCGAATGCGGCGATT----AACAA-G 51 * ** ** * ** * *** * * * * consensus_9396#1 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 451 consensus_9396#3 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 364 consensus_9396#2 AGCCGGTCGTACCGGGACATTTCCTGTGCCTGCACGCAATCGCAAAAGAGTACGTCGTGA 475 consensus_9396#0 AGCCGGTCGT-CCGGGACATTTCCTGTGCC-GCACGCAACCGCAAAA-AGTACGTCGTGA 283 consensus_9396#4 ATCCCGCAGC--CGAAAGGTACGCCG-GCC--CAGATGGCC--AAGC-TCTACCTGAAGC 276 consensus_9396#5 ATCCCGCAGC--CGAAAGGTACGCCG-GCC--CAGATGGNNCCAAGC-TCTACCTGAAGC 105 * ** * * ** * * * * *** ** ** *** * * consensus_9396#1 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 507 consensus_9396#3 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 420 consensus_9396#2 TTAATCTGACCGAGA----AGGCCCGCTGTCCGGAGGCGGGCGATGTGCGCCCGTGCAGT 531 consensus_9396#0 TTAATCTGACCAGATCGACAAGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 343 consensus_9396#4 GTGACCAGATCGACA-----AGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 331 consensus_9396#5 GTGACCAGATCGACA-----AGTACGCGACGAAAGATCTGCCGATGACGTCGAACGCACT 160 * * * ** * * *** * * ***** * *** * consensus_9396#1 GCC-GATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGG-AGGGTGT 560 consensus_9396#3 GCC-GATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGGGAGGGTGT 474 consensus_9396#2 GCCTGATGGGCTGTACCACTTCAA----CACGAACGTGGCGTT-CGACCGGG-AGGGTGT 585 consensus_9396#0 GCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGT 403 consensus_9396#4 GCTACAGGAGTCGGTCTGCTA--------------------------------------- 352 consensus_9396#5 GCTACAGGAGTCGGTCTGCTACGAAAGTCACTGTTGCAACTTTACGATTAACTACAGCGT 220 ** * * * * * ** consensus_9396#1 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATC-AACACGA 616 consensus_9396#3 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGTTCGGGGAGGCCGGTATC-AACACGA 530 consensus_9396#2 --GGTCGTGTC-GCGGTACCGAAAGTTCAACCTGT-CGGGGAGGCCGGTATCGAACACGA 641 consensus_9396#0 CAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGG 463 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 CAAGCCGAATCTGCAAAATACGAACTACTATCGCTACAAGCTGGCCGCTTACGATGCTGG 280 consensus_9396#1 CCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTT--GGGGTGA-AGTTTGGCCACT 673 consensus_9396#3 CCGTCTACCCGGAGATGGCGAGCTTTGAGACGGATTTTTGGGGGTGA-AGTTTGGCCACT 589 consensus_9396#2 CCGTCTACCCGGAGATG------------------------------------------- 658 consensus_9396#0 CCGTACGTTCGACG--GGTTTGCCGATGGCCAGATTACGACGTGTGCCATTTTTGCCTGC 521 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 CCGTACGNTCNC------------------------------------------------ 292 consensus_9396#1 TTATCTGTTTCGATCTGATGTTCAACCAGCCGGCG------------------------- 708 consensus_9396#3 TTATCTGTTTCGATCTGATGTTCAACCAGCCGGCGCTGGAGCTTCGTACGGTTGGGCATT 649 consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 TCCTCCGCCAACTATAGCGACTGTTCGCGCCGGTTCGCTGCAACCGAAGCGTACGATGAA 581 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ACCGACT----------------------------------------------------- 656 consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 GCGGTCACGTTCAACACCATCACGATACAGGCAAAGTTCGCTAACAACGATGAAACGTTT 641 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 GTGCTGCCGAACAACGTGGATACCAGCATCGTACCGTTCGACGTGTCCGAGACGGAGTAC 701 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 ACAGTCGTACCGAGCGTTGGCGATTCGACACCGCACAACATTGTGACGTACAAGCTGACC 761 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 CGCGCTCATTCGGACCTCTACACGTTCGCGATCTGGGCGCGCAAGTTCGAGCAGTACGCA 821 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 TCGGCCGGCGCCAATCCAGCCGGTTTATTCTCCGCGTTAGTATTGATTGTGAGCGCCGCG 881 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 GCGATGGGAGGGCTGGCGAAGAATCTGTGGCAATGTTAACGACACTTCCACCCTTTTTGC 941 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 AGCATTCATGGTGCAGAATTGTAGCGAGTGCATTTCACCATCACATTGCATCCATATCTC 1001 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 GTCATGCGATCGCTTCACGCCATCAAACATTGCTTCATTCAAAACACATTGGTTCATGCT 1061 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 ATGGGGTGAGATGAGGTGGGTAAAGTAAACGTCTTTGATGAATCGTTAATTTATAAATGA 1121 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------------------ consensus_9396#3 ------------------------------------------------------------ consensus_9396#2 ------------------------------------------------------------ consensus_9396#0 CGATATNTGCGATTAATGCTAATAATCGGTGTTCAAGAGATCANNATAAAAATAATAAAC 1181 consensus_9396#4 ------------------------------------------------------------ consensus_9396#5 ------------------------------------------------------------ consensus_9396#1 ------------------------------------------------- consensus_9396#3 ------------------------------------------------- consensus_9396#2 ------------------------------------------------- consensus_9396#0 GTTCTTACTAGTAAAAAAANNNAAAAAAAANAAAAAAAANCNNTTNGGG 1230 consensus_9396#4 ------------------------------------------------- consensus_9396#5 ------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||