These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9397#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1260 fasta sequence [TTCTTGTATTGCCGACATCAATTAATTCAATCTTGTTCGTTTGGGACCCAGAAATACACGCACGCACGCACGCACACACACACACACCGCCAACAGCATTGGGGCCGTGTGAGCACATATCTCGCAAATTCAGTAATTGTTAGCTGCTTACAAGCGCTTATAGTACATTTCGTAGACGTGAGTGGATGCCACTGCGAGAGAGGAGGGGTAAGTAGGGGTAAGTAAATGGGTTCGGAAAGGTAAACGTGTTAGCAGGACAACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGCAGAAGGAGTGAGTGAGGAAAGGGAGAGATAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCC---CTCCTTCTCCCCTAGGCTTAGGCGAGCTGGTCCTGGCCGTTGGCGGTGTCCTGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC-GAGCTGTGCGGGGCATTGCGC-TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCGGTCTGAGTCGTCCGGACGCGTGGGCGGACGCGTGGGCGG] [+] EMBL CNS08W4N [TTCTTGTATTGCCGACATCAATTAATTCAATCTTGTTCGTTTGGGACCCAGAAATACACGCACGCACGCACGCACACACACACACACCGCCAACAGCATTGGGGCCGTGTGAGCACATATCTCGCAAATTCAGTAATTGTTAGCTGCTTACAAGCGCTTATAGTACATTTCGTAGACGTGAGTGGATGCCACTGCGAGAGAGGAGGGGTAAGTAGGGGTAAGTAAATGGGTTCGGAAAGGTAAACGTGTTAGCAGGACAACAAGCGTGTTCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGCAGAAGGAGTTAGTAACGAAAGGGAGAAATAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCC CTCCTTCTCCCCTAGGCTTAGGCGAGCTGGTCCTGGCCGTTGGCGGTGTCCTGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGC AAAAA GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTTATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATTTTTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTTCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGC ] [-] EMBL BM656805 [ ACGCACGCACACACACACACACCGCCAACAGCATTGGGGCCGTGTGAGCACATATCTCGCAAATTCAGTAATTGTTAGCTGCTTACAAGCGCTTATAGTACATTTCGTAGACGTGAGTGGATGCCACTGCGAGAGAGGAGGGGTAAGTAGGGGTAAGTAAATGGGTTCGGAAAGGTAAACGTGTTAGCAGGACAACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGCAGAAGGAGTGAGTGAGGAAAGGGAGAGATAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCC CTCCTTCTCCCCTAGGCTTAGGCGAGCTGGTCCTGGCCGTTGGCGGTGTCCTGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGcgg ] [-] EMBL BX619907 [ CGCTTGTNATAGATTTCGTAGACGTGAGTGGATGCCACTGCGAGAGAGGAGGGGTAAGTAGG GTAAATGGGTTCGGAAACGTAAACGTGTTAGCAGGACAACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGT GCAGAAGGATTGTGTGAGG AAGGGAGAGAT AGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCC CTCCTTCTCCCCTAGGCTCAGGCGAGCTGGTCCTGGCCGTTGGCGGTATCCTGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTC ] [-] EMBL AGA285797 [ ATGCGCCCTTCTCCTCCTCCCCTAGGCTTAGGCGAGCTGGTCCTGGCCGTTGGCGGTATCCTGGTTTTTCATCACGTCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGT ] [-] EMBL BM600882 [ TGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGGAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTTTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGCGGGGTACACAACTTTCGCTCCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCGG ] [-] EMBL BM603603 [ ccgGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTTCGCACACCCCTCTGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACGCACACACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTAGGACCCACTGCTGGCTTTGGGATGGTGTTGcgg ] [-] EMBL BM631497 [ GGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCC GAGCTGTGCGGGGCATTGCGC TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGTGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCTATGGGAGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCT ] [-] EMBL BM621242 [ TTGCGCTTTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGTGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCTATGGGAGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCCGTCTGAGTCGTCCGGACGCGTGGGCGGACGCGTGGGCGG] [-] EMBL BX618585 [ TGTTTTGGTCCCTACCGCTTGCTTGCCGTACGGCGCTTTCGGACCCCCTGCTGGCTTTGGGATGGTGTTGGTGCCCCTGCCGTTTGCTGA ] consensusID : consensus_9397#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 996 fasta sequence [AACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGTAGAAGGATTGTGTGAGGAAGGGAGAGATAGAGAGAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCCCTCCTTCACCCCTAGGCTTAGGCGAGCTGGTCCTGACCGTTGGCGGTATCCTGGTTTTTCATCACATCCGGTAGATCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGGCAT-TGCGCTTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACAT-CCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGAACACTGGCCAGTGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGTTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCCGTCTGAGTCGTCTGGT-TTTGTTTTTCCA] [-] EMBL CNS094FY [AACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTCTGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGTAGAAGGATTGTGTGAGGAAGGGAGAGATAGAGAGAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCCCTCCTTCACCCCTAGGCTTAGGCGAGCTGGTCCTGACCGTTGGCGGTATCCTGGTTTTTCATCACATCCGGTAGATCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGGCAT TGCGCTTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGAACACTGGCCAGTGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGTTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCCGTCTGAGTCGTCTGGT TTTGTTTTTCCA] [-] EMBL CNS09IO3 [ ACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGTAGAAGGATTGTGTGAGGAAGGGAGAGATAGAGAGAGAGAGAGAGAAAGAGACAGTAGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCCCTCCTTCACCCCTAGGCTTAGGCGAGCTGGTCCTGACCGTTGGCGGTATCCTGGTTTTTCATCACATCCGGTAGATCGGGCGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGGCATATGCG TTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACAT CCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCCTCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGAACACTGGCCAGTGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGTTTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCGCCCAAAAAAATCGATCCTTGCCCGCTCCGTCTGAGTCGTCTGGTGCTTCTTTT ] [+] EMBL CNS094FZ [ CAATACGGGGGAAAAGGCTGCCAAGACCTTTGGTTAAAACGTGTGCAGTAAAAGGATTTTTTAAGGAAGGGAGAGATAGAGAGAGAGAGAGAGAAAGAGACAGTTGTAATAGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAGCCCGCCCATGCGCCCTCCTTCACCCCTAGGCTTAGGGGAGCTGGTCCTGACCGTTGGGGGTATCCTGGTTTTTCATCACATCCGGTAGATCGGGGGGCAGGGAGTAGGGTGTCAGCTCGAGCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGGCAT TGCGCTTTCGCTGTCACGACCGTGATGCCGCAGTTCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGGGGCACTTTGAGTTTTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACAT CCATTTTGTCAAAGCAAATGCA ] consensusID : consensus_9397#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 564 fasta sequence [CGCTAGCCCGAGCTGTGCGGGGGCATTGCGCTTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTTCGCACACCCCTCTGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACGCACACACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTAGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCCCCACGCGTCCGCGG] [-] EMBL BM610733 [CGCTAGCCCGAGCTGTGCGGGGGCATTGCGCTTTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATGTTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATTTTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTTCGCACACCCCTCTGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACGCACACACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTAGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCCCCACGCGTCCGCGG] [-] EMBL BM601449 [ CTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTCCGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCGTTGCGTGTATGTGTTGATCCTACTGCGATGACTGTTGCCTTCTCTTTTTCGCACACCCCTCTGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACGCACACACACACAAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAATGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGCTTTAGGACCCAATGCTGGCTTTGGG ] consensusID : consensus_9397#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 291 fasta sequence [GTTCGTCGGTTTTGTCGTCGAGTGTGTATGGCGATCGTTACCGTCCAGGCGACGCTAGACCGTATCCGTGCCAGCAAGAATCTGCTCAGCCAGCTGCAGTCGGACGATGCCCTGGAGTCGTACCGGTCCGAGACGCGCTCGAAGCTGAGCGAACAGACTGCCCGCAAGCTGGCGGACAAGATGGCGATGGTGAACAGCGACGAGGATGAGTTTGTCTCCACCGGCATGACGGCACGCAAGGCACTCAAGATCCGTGCCAGCACCGAATCGTCCTCGTTGGCCAAGAGCTCG] [+] EMBL BX618119 [GTTCGTCGGTTTTGTCGTCGAGTGTGTATGGCGATCGTTACCGTCCAGGCGACGCTAGACCGTATCCGTGCCAGCAAGAATCTGCTCAGCCAGCTGCAGTCGGACGATGCCCTGGAGTCGTACCGGTCCGAGACGCGCTCGAAGCTGAGCGAACAGACTGCCCGCAAGCTGGCGGACAAGATGGCGATGGTGAACAGCGACGAGGATGAGTTTGTCTCCACCGGCATGACGGCACGCAAGGCACTCAAGATCCGTGCCAGCACCGAATCGTCCTCGTTGGCCAAGAGCTCG] consensusID : consensus_9397#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 220 fasta sequence [CCGAAAATTTATTCTTCCTCTCCCTCCTCGGATCCGGTGAGCATGCCGATCAGAGCAGCAGTGTCGATGTAGCCCTTATCGTCAATGACCATCTGATCGAATGCATCGTCAACCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATGGACAACGACAAGGATGGTGTCATTGGCAAGAACGATC] [+] EMBL BM642694 [CCGAAAATTTATTCTTCCTCTCCCTCCTCGGATCCGGTGAGCATGCCGATCAGAGCAGCAGTGTCGATGTAGCCCTTATCGTCAATGACCATCTGATCGAATGCATCGTCAACCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATGGACAACGACAAGGATGGTGTCATTGGCAAGAACGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9397#0 TTCTTGTATTGCCGACATCAATTAATTCAATCTTGTTCGTTTGGGACCCAGAAATACACG 60 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 ------------------------------------------------------------ consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 CACGCACGCACGCACACACACACACACCGCCAACAGCATTGGGGCCGTGTGAGCACATAT 120 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 ------------------------------------------------------------ consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 CTCGCAAATTCAGTAATTGTTAGCTGCTTACAAGCGCTTATAGTACATTTCGTAGACGTG 180 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 ------------------------------------------------------------ consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 AGTGGATGCCACTGCGAGAGAGGAGGGGTAAGTAGGGGTAAGTAAATGGGTTCGGAAAGG 240 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 ------------------------------------------------------------ consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TAAACGTGTTAGCAGGACAACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTC 300 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 ------------------AACAAGCGTGTGCATTCGGTGACCCGGAGTGCTGGTAGGGTC 42 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGCA 360 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 TGTCTCACACCAATACGGGGGAAAAGGCTGCCAAGACCTGTGGTTAGAACGTGTGCAGTA 102 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 GAAGGAGTGAGTGAGGAAAGGG-----AGAGATAGAGAGAGAGAAAGAGACAGTAGTAAT 415 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 GAAGGATTGTGTGAGGAAGGGAGAGATAGAGAGAGAGAGAGAGAAAGAGACAGTAGTAAT 162 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 AGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAG 475 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 AGTGTGAACGAAACACAGTAAACCCCAAACATTCTAGCTTTGGCCTCGCCCGCCCGCTAG 222 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 CCCGCCCATGCGCCCTCCTTCTCCCCTAGGCTTAGGCGAGCTGGTCCTGGCCGTTGGCGG 535 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 CCCGCCCATGCGCCCTCCTTCACCCCTAGGCTTAGGCGAGCTGGTCCTGACCGTTGGCGG 282 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TGTCCTGGTTTTTCATCACATCCGGTAGGTCGGGCGGCAGGGAGTAGGGTGTCAGCTCGA 595 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 TATCCTGGTTTTTCATCACATCCGGTAGATCGGGCGGCAGGGAGTAGGGTGTCAGCTCGA 342 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 GCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGG-CATTGCGCT 654 consensus_9397#2 ----------------------------CGCTAGCCCGAGCTGTGCGGGGGCATTGCGCT 32 consensus_9397#1 GCGACTCGAAGTCGCCATTTTCGCGCACCGCTAGGCCGAGCTGTGCGGGG-CATTGCGCT 401 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATG 714 consensus_9397#2 TTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATG 92 consensus_9397#1 TTCGCTGTCACGACCGTGATGCCGCAGTCCTGCAGCGTTTTGTCATCGTCCATCAGCATG 461 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATT 774 consensus_9397#2 TTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATT 152 consensus_9397#1 TTGTCTTTGTTGTATAGTCGTTGATCACGGGGAGGCACTTTGAGTATTCCTTCGATCATT 521 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTC 834 consensus_9397#2 TTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTC 212 consensus_9397#1 TTCTTCAGCTCGTACACCGGCGTCGTCTCTTTGGCATCGGTGAAAATCGTCGTCTTCTTC 581 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 CGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCG 894 consensus_9397#2 CGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCG 272 consensus_9397#1 CGCCGGATCATCATAAATACATCCATTTTGTCAAAGCAAATGCACTACCGCCGCTACTCG 641 consensus_9397#3 ------------------------------------------GTTCGTCGGTTTTG-TCG 17 consensus_9397#4 ------------------------------------CCGAAAATTTATTCTTCCTC-TCC 23 * ** consensus_9397#0 TTGCGTGTATGTGTTGATC-CTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCC 953 consensus_9397#2 TTGCGTGTATGTGTTGATC-CTACTGCGATGACTGTTGCCTTCTCTTTTTCGCACACCCC 331 consensus_9397#1 TTGCGTGTATGTGTTGATC-CTACTGCGATGACTGTTGCCTTCTCTTTTGCGCACACCCC 700 consensus_9397#3 TCGAGTGTGTATGGCGATCGTTACCGTCCAGGC-GACGCTAGACCGTATCCGTGC----C 72 consensus_9397#4 CTCCTCGGATCCGGTGAGC-ATGCCGATCAGA--GCAGCAGTGTCGATGTAGCCCTTATC 80 * * * ** * * * * * * ** * * * * consensus_9397#0 TCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACAC 1013 consensus_9397#2 TCTGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACGCACACACACAC 391 consensus_9397#1 TCCGTGTGTCCTTTGACGCACAAACTACACAAACACGCACGCACGCACACACGCACACAC 760 consensus_9397#3 AGCAAGAATCTGCTCA---GCCAGCTGCAGTCGGACGATGCCCTGGAGTCGTACCGGTCC 129 consensus_9397#4 GTCAATGACCATCTGAT-CGAATGCATCGTCAACCCCATCCTCGGTCTTCGTTCTCTTCT 139 * * * * * * * * * consensus_9397#0 AAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAA 1073 consensus_9397#2 AAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAA 451 consensus_9397#1 AAGCGGGGTACACAACTTTCGCTTCGGAGAATCCTGCGATCGGTGAGCGCTGGCTGGCAA 820 consensus_9397#3 GAGACGCGCTCGAAGCTGAGCGAACAGACTGCCCGCAAGCTGGCGGACA--AGATGGCGA 187 consensus_9397#4 CCCAGAAGCAGATCGCCGAATTCAAAGAG-GCTTTCGCGCTAATGGACA----ACGACAA 194 * * ** * * * * * consensus_9397#0 TGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGC 1133 consensus_9397#2 TGGGGGAGGACACTGGCCACGGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGC 511 consensus_9397#1 TGGGGGAGAACACTGGCCAGTGGATGTTTTGGTCACTACCGCTTGCTTGCCGTACGGCGT 880 consensus_9397#3 TGGTGAACAGCGACGA-----GGATGAGTTTGTCTCCACCGGCATGACGGCACGCAAGGC 242 consensus_9397#4 GGATGG-TGTCATTGGCAA--GAACGATC------------------------------- 220 * * * * * * * consensus_9397#0 TTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCG 1193 consensus_9397#2 TTTAGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCCCCACGCGTCCGCGG------- 564 consensus_9397#1 TTTCGGACCCACTGCTGGCTTTGGGATGGTGTTGGTGCACCTGCCGTTTGCTGATTAGCG 940 consensus_9397#3 ACTCAAGATCCGTGCCAGCACCGA-ATCGTCCTCGTTGGCCAAGAGCTCG---------- 291 consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 CCCAAAAAAATCGATCCTTGCCCGCTCGGTCTGAGTCGTCCGGACGCGTGGGCGGACGCG 1253 consensus_9397#2 ------------------------------------------------------------ consensus_9397#1 CCCAAAAAAATCGATCCTTGCCCGCTCCGTCTGAGTCGTCTGGTTTTGTTTTTCCA---- 996 consensus_9397#3 ------------------------------------------------------------ consensus_9397#4 ------------------------------------------------------------ consensus_9397#0 TGGGCGG 1260 consensus_9397#2 ------- consensus_9397#1 ------- consensus_9397#3 ------- consensus_9397#4 ------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||