These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9401#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1080 fasta sequence [AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGCAGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAATTAGAAGTTTAAAGAAAAAAAGGAAATTTGTTATAAAAAAGAATTTCAATGATGATCGTTATAATTAGGATGAAAAACACAGAAACAAAAAAACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGGAAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATAT] [+] EMBL AL931691 [AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGCAGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATCGAGCGAGAGAGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGA ] [+] EMBL BX610895 [ CTCAACTTCGGGGACGATATTGCGTCCCAGCTCCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTGAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCATGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGC ] [+] EMBL BM653047 [ ccgGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGATATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTCGATCCCGTCATCACACCGTCCGGCATGACCTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTCGGCCACTTCGATCCGGTAACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAGTGCGTTTGAGACGA ] [+] EMBL BX610195 [ GCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTT GGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAATTAGAAGTTTAAAGAAAAAAAGGAAATTTGTTATAAAAAAGAATTTCAATGATGATCGTTATAATTAGGATGAAAAACACAGAAACAAAAAAACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGGAAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATAT] consensusID : consensus_9401#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 964 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTAAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCTGCCACATCAAAATGAAGCGCTGGGAGACGGCCTGCGTCGACTGCCGACGGGCGCTCGATATGGATCCGAACCTCGTCAAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC] [+] EMBL BM620692 [CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATC ] [+] EMBL BM639548 [ GCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCA ] [+] EMBL BM644956 [ CCGCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGT CCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTAAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCTGCCACATCAAAATGAAGCGCTGGGAGACGGCCTGCGTCGACTGCCGACGGGCGCTCGATATGGATCCGAACCTCGTCAAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC] consensusID : consensus_9401#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 944 fasta sequence [CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCACCTCCCGT] [+] EMBL CNS09F57 [CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGT CATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCACCTCCCGT] [+] EMBL CNS09J9L [ AAACAAC AAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAGCAGCTCGTCAGCACCGCCAGCGAGTTGGCAGCATTG ] [+] EMBL BM590987 [ ccgCCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACG ] [+] EMBL CNS09HY1 [ CCCAGACGGTCGATTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTTTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTTACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGATTTGTGCCCGATAGATAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGAAAAATAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCATCTTCCGT] [-] EMBL CNS09HY2 [ CCAACAATGAGCAAGCATATGTACTCCCCGGCAAATTTTTCGGACGTCGAGCTTAAGGATCAAAGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATAAAAAACTCCAAAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCAT ] [-] EMBL CNS09J9M [ CCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCCCCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATT ] consensusID : consensus_9401#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [CAGATCCCCACGAGTTGAGAAGACATGGAAAACGTATCGCAAGCTTAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGACTTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACGTGCGTTTGAAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTTAAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAGAAAGAAGACATAATTAGAACGTTTAANAGGAAAGACACAGGGAAACTATGTCACT] [+] EMBL BX467268 [CAGATCCCCACGAGTTGAGAAGACATGGAAAACGTATCGCAAGCTTAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGACTTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACGTGCGTTTGAAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTTAAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAGAAAGAAGACATAATTAGAACGTTTAANAGGAAAGACACAGGGAAACTATGTCACT] consensusID : consensus_9401#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence [AGGCAAGAATCCCCACGAGNNAAACGCCACATTGGAGCACCTGCGATGGAATGTACTGTGGTCAGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGTACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGCGCCCTCTGGCACATCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACGGGCGCTCGATATGGACCCGAAGCTCGTCAAAGGGCACTTCTATTACTCGGGCTCAGGCTGA] [+] EMBL BX468211 [AGGCAAGAATCCCCACGAGNNAAACGCCACATTGGAGCACCTGCGATGGAATGTACTGTGGTCAGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGTACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGCGCCCTCTGGCACATCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACGGGCGCTCGATATGGACCCGAAGCTCGTCAAAGGGCACTTCTATTACTCGGGCTCAGGCTGA] consensusID : consensus_9401#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence [GCTCAGGCAGAATCCCCCACGAGGTTTCAGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTAGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAAGTTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAAGTTAGAAGTTTAACAGAAACAGAAAGGAAATATTGTTATAAAAGAAGGAATTTCAAGTGCAGTGATCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAGCGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG] [+] EMBL BX466503 [GCTCAGGCAGAATCCCCCACGAGGTTTCAGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTAGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAAGTTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAAGTTAGAAGTTTAACAGAAACAGAAAGGAAATATTGTTATAAAAGAAGGAATTTCAAGTGCAGTGATCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAGCGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9401#1 ------------------------------------------------------------ consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 ------------------------------------------------------------ consensus_9401#0 AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGC 60 consensus_9401#3 ------------------------------------------------------------ consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 ------------------------------------------------------------ consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 ------------------------------------------------------------ consensus_9401#0 TGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGC 120 consensus_9401#3 ------------------------------------------------------------ consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 --------------------------CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGC 34 consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 -------------CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGC 47 consensus_9401#0 AGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCT 180 consensus_9401#3 ------------------------------------------------------------ consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 GTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATT 94 consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 GTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATT 107 consensus_9401#0 GGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATA 240 consensus_9401#3 ------------------------------------------------CAGATCCCCACG 12 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 AATTTCCCA-ACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGT 153 consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 AATTTCCCA-ACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGT 166 consensus_9401#0 GACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCA 300 consensus_9401#3 AGTTGA-----GAAGACATGGAAAAC-GTATCGC-AAGCTTAAGGTGGACGACACGATCA 65 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 GTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGG 213 consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 GTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGG 226 consensus_9401#0 ACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGA 360 consensus_9401#3 ACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGA 125 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 CTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTC 273 consensus_9401#4 ------------------------------------------------------------ consensus_9401#2 CTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTC 286 consensus_9401#0 CTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGA--AACGAGAGGTACC 418 consensus_9401#3 CTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGA--AACGAGAGGTACC 183 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 TTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGA 333 consensus_9401#4 ---------------------------------------------------------AGG 3 consensus_9401#2 TTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGA 346 consensus_9401#0 TGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTC 478 consensus_9401#3 TGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTC 243 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 CAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTG-GCGGGAATG--TACT 390 consensus_9401#4 CAAGAATCCCCACG----AGNNAAACGCCACATTGGAGCACCTGCGATGGAATG--TACT 57 consensus_9401#2 CAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTG-GATGGAATG--TACT 403 consensus_9401#0 CGGCATGACGTACG----AGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACT 534 consensus_9401#3 CGGCATGACGTACG----AGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACT 299 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 GTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 450 consensus_9401#4 GTGGTCAGG-TACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 116 consensus_9401#2 GTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 463 consensus_9401#0 TCGATCCGGTGACGCGCGTCAAACTGACGCAGGAC----CAGCTGATATCGAACTACTCG 590 consensus_9401#3 TCGATCCGGTGACGCGCGTCAAACTGACGCAGGAC----CAGCTGATATCGAACTACTCG 355 consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 CTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 510 consensus_9401#4 CTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 176 consensus_9401#2 CTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 523 consensus_9401#0 ATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAAC-GAATGGGCGCTCGA-TTATTAGG 648 consensus_9401#3 ATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAAC-GAATGGGCGCTCGACTTATTAGG 414 consensus_9401#5 --------------------GCTCAGGCAGAATCCC-CCACGAGGTTTCAGATTATTAGG 39 * * * * * * consensus_9401#1 GAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCC 570 consensus_9401#4 GAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCC 236 consensus_9401#2 GAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCC 583 consensus_9401#0 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGT-- 705 consensus_9401#3 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGT-- 471 consensus_9401#5 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGTA- 97 ** * * * * * *** * * **** **** consensus_9401#1 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCA 630 consensus_9401#4 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTT-TGCGGTCCACCGAAACCCGCA 295 consensus_9401#2 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTT-TGCGGTCCACCGAAACCCGCA 642 consensus_9401#0 ---GTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAG-TGCGTTTGA-GACGATAGGGG 760 consensus_9401#3 ---GTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACG-TGCGTTTGAAGACGATAGGGG 527 consensus_9401#5 ---GTAGCAGTAGCTAGGAGAGGATTACGGTTTGGA-G-TGCGTTTGA-GACGATAGGGG 151 * ** *** * *** * * * **** * * * * consensus_9401#1 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTA 690 consensus_9401#4 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTT 355 consensus_9401#2 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTT 702 consensus_9401#0 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAATT- 803 consensus_9401#3 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAATTT 571 consensus_9401#5 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAAGTT 195 ** * **** ** ****** ** ** * * * * consensus_9401#1 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGG-AAGTACGACGATGCCGTC-AATCTGT 748 consensus_9401#4 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGT 415 consensus_9401#2 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGG-AAGTACGACGATGCCGTC-AATCTGT 760 consensus_9401#0 AAGCAACAGTGTGTTTTTACAA-CCTTGATTGA-ATGCAAAAA-GTAAGAAG-AAAAAA- 858 consensus_9401#3 AAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAG-AAAGAAG 630 consensus_9401#5 AAGCAACAGTGTGTTTTTACAA-CCTTGATTGA-ATGCAAAAA-GTAAGAAG-AAAAAA- 250 *** * ** * * * * * * * * * ** consensus_9401#1 ACACGAAAGCAATCATCAAA--AACTCCAC---AAATGCCACC-TACTTTACGAA-CCGC 801 consensus_9401#4 ACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGC 475 consensus_9401#2 ACACGAAAGCAATCATCAAA--AACTCCAC---AAATGCCACC-TACTTTACGAA-CCGC 813 consensus_9401#0 --ATAA-TTAGAAGTTTAA-----AGAAAA---AAAGGAAATTTGT-TATAAAAAAGAAT 906 consensus_9401#3 ACATAA-TTAGAACGTTTA-----ANAGGA---AAGACACA---------GGGAAACTAT 672 consensus_9401#5 --ATAAGTTAGAAGTTTAACAGAAACAGAA---AGGAAATATTGTTATAAAAGAAGGAAT 305 * * * * * * * ** consensus_9401#1 GCCCTCTGCCACA--TCAAAATGAAG-CGCTGGGAGACGGCCTGCGTCGACTGCCG-ACG 857 consensus_9401#4 GCCCTCTGGCACA--TCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACG 533 consensus_9401#2 GCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATA 873 consensus_9401#0 TTCAA---TGATGA-TCGTTATAATTAGGATGAAAAACACA---------GAAACAAAAA 953 consensus_9401#3 GTCAC---T--------------------------------------------------- 678 consensus_9401#5 TTCAAGTGCAGTGA-TCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAG 364 * consensus_9401#1 GGCGCTCGATATGGATCCGAACCTC-----GTCAAAGGGCACTTC--TTTCTCGGCCTCA 910 consensus_9401#4 GGCGCTCGATATGGACCCGAAGCTC-----GTCAAAGGGCACTTCTATTACTCGGGCTCA 588 consensus_9401#2 TGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCA 933 consensus_9401#0 AACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGG 1013 consensus_9401#3 ------------------------------------------------------------ consensus_9401#5 CGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG--- 421 consensus_9401#1 GCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC------ 964 consensus_9401#4 GGCTGA------------------------------------------------------ 594 consensus_9401#2 TCACCTCCCGT------------------------------------------------- 944 consensus_9401#0 AAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGC 1073 consensus_9401#3 ------------------------------------------------------------ consensus_9401#5 ------------------------------------------------------------ consensus_9401#1 ------- consensus_9401#4 ------- consensus_9401#2 ------- consensus_9401#0 TAGATAT 1080 consensus_9401#3 ------- consensus_9401#5 ------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||