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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9406#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1471 fasta sequence
[TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTGTTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC--CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT-GGTAGAGAACTACGTGCCCGGGAA-GCTGGACTCGCTA-GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT-GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC-TCACA-CCGGAAGGAACTG-ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT-AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA]
[+] EMBL CNS08OQG [TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTGTTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAAC ]
[+] EMBL CNS090UP [ ggagTCATTTGCGTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCATCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGGGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAATTTTAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGGTAGAGAACTACGTGCCCGGGAAGGCTGGACTCGCTAGGGGCTGGGgct ]
[+] EMBL CNS08X0V [ CACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCATCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAAATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCGAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCC ]
[+] EMBL CNS09IVM [ CGACGGCATGTTGCTAAAGCGCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGC CGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGAAATCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTGAAAAAAGATCCTTTCGGACA ]
[+] EMBL CNS09APV [ cgAAACCCCTTACTGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGGGGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGCCGCGGGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGGCGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCAC ]
[+] EMBL BX622730 [ GTGCGGAAGTGTACAAGATCGAGCGACCGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATTCCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTT GGTAGAGAACTACGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCANGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGANGCGAAAC ]
[-] EMBL CNS08OQH [ CGTGCCCGGGAA GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTTTGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA]
[+] EMBL BX624926 [ A GCTGGACTCGCTA GGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATC ]
[-] EMBL CNS09IVN [ TGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATG ACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGAAATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAA ]
[-] EMBL CNS09APW [ ACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACATAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGATGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACACTCAGGCTGGGTT ]
[-] EMBL CNS08X0W [ GTTCCATAACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTATG ACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCGAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCT GGGGAACGGCACACGAAAGCATTGTTCCGTATGAGGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGTACGCGCGTC TCACA CCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAAT AAACAGCATGAAAGAAGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGAa ]
[-] EMBL CNS090UQ [ cagcagcaGTCATCACACCCGGAAGGAACTG ATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAAAAAGCATGAAAGAAGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTAAATCCTTGTAATAAATGATCATTGTTGAAAAAG ]
consensusID : consensus_9406#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 901 fasta sequence
[TTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAA]
[+] EMBL CNS093YM [TTGCGTGAACTTGAAGACGGGTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTGTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGGACCACCGGCCAAGGTTGGCATAGCGATCACGGACATTGCCACGGGACTGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTGTCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTGCGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATACAATAAGCATCGGTTCGAA]
[-] EMBL CNS093YN [ CCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAACCGGACGCGCCTCTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGCAAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATAAACAGCATGAAAGAGGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACACTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAAGCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGA ]
consensusID : consensus_9406#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence
[AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGTACACATTACCGGAAGCGAGGACGGACCACGGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAAGGAGGCGAA]
[+] EMBL AL693605 [AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGGGTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGCCCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCATCGCTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGGCTACGACGTTATCGCCGCATCCATGGGTGGGCTGTACACATTACCGGAAGCGAGGACGGACCACGGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACACGGTGCAATACTAGCCGCGCTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTGACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTCAACGCCGGCAAAGGAGGCGAA]
consensusID : consensus_9406#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 158 fasta sequence
[CAAGANTCCGACGAGTGNATCGGCGTGCACACATTGCCACTGATACTGGGGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTTNTACCGGGCCGTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG]
[+] EMBL BX469143 [CAAGANTCCGACGAGTGNATCGGCGTGCACACATTGCCACTGATACTGGGGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTTNTACCGGGCCGTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 TTGCTGCGTGAGGAGGTTGCGCTCCGCCTGCTTCCCCACCTGTGCTTGCGTTATCTTTTG 60
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 TTCGAGACAGTTCATTTGCCTACACCATTCTCATCGACGGCATGTTGCTAAAGCGCTTAC 120
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 TGCCACCTGCTTCCGTGATCGTCAATGGCATCCGGCGTGCACACATTGCCACTGATACGG 180
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 GGGGGAAACAATTTCCTCTGGAAGGAGTCCGCATCCTTGATCTAACGCGCATCGTTGCCG 240
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 GGCCGTACTGTACCATGGTGCTCGGAGATCTCGGTGCGGAAGTGTACAAGATCGAGCGAC 300
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ------------------------------------------------------------
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 CGTATGAGGGTGACGAATCGCGCAAATGGGGCCCTCCGTTCATGCGCAACTCGACCGATT 360
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ----------------------------------------TTGCGTGAACTTGAAGACGG 20
consensus_9406#2 --------------AGAATCTGCCCCGCAGGTATTATCGTTTGCGTGAACTTGAAGACGG 46
consensus_9406#0 CCGTGTACTTCATGGCGGCGAATCGGAACAAGAAGAGCGTTTGCGTGAACTTGAAGACGG 420
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 GTCGAGAGGTGATTTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 80
consensus_9406#2 GTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 106
consensus_9406#0 GTCGAGAGGTGATCTACGAGCTGGCCAAGAAGTGCGACGTCTTGGTAGAGAACTACGTGC 480
consensus_9406#3 -----CAAGANTCCGACGAGTGNATC--GGCGTGC-ACACATTGCCACTGA--TAC-TGG 49
* * ***** * * **** ** *** * ** *** **
consensus_9406#1 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 139
consensus_9406#2 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 165
consensus_9406#0 CCGGGAAGCTGGACTCGCTAGGGCTGGGCTACGAAACGCTCAAATCGATCGCCCCAT-CG 539
consensus_9406#3 GGGGGACAACAATTTCCTCTGGAAGGAGTCCCGCATNACTTGAATCTAACGCGCTCTGTT 109
**** ** ** * * ** * ** **** * *** * *
consensus_9406#1 CTAGTGTACT-GTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 198
consensus_9406#2 CTAGTGTACTTGTTCTATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 225
consensus_9406#0 CTAGTGTACT-GTTCCATTACAGGTTTCGGGTCGGAGGGCCCGTACAAGGCTAAACCTGG 598
consensus_9406#3 NTACCGGGCC-GTATTGTACCCATGGTTGACTCGGGAGATCTCCGTGCGG---------- 158
** * * ** * * * * **** * * **
consensus_9406#1 CTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGG 258
consensus_9406#2 CTACGACGTTATCGCCGCATCCATGGGTGGGCTG-TACACATTACCGGAAGCGAGGACGG 284
consensus_9406#0 CTACGACGTTATCGCCGCATCCATGGGTGGGCTGCTACACATTACCGGAAGCGAGGACGG 658
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 ACCACCGGCCAAGGTTGGCATAGCGATCACGGACATT-GCCACGGGACTGTTGCATGTTT 317
consensus_9406#2 ACCAC-GGCAAGGTTTGGCATAGCGATCACGGACATTTGCCACGGGACTGTATTGCACAC 343
consensus_9406#0 ACCACCGGCCAAGGTTGGCATAGCGATCACGGACATT-GCCACGGGACTGTA-TGCACAC 716
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 GATA-AACGTCGCAAGCAACTATCTCAACGCCGGCAAGGAGGCGAAACGCTGGGGAACGG 376
consensus_9406#2 GGTGCAATACTAGCCGCG-CTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTG- 401
consensus_9406#0 GGTGCAATACTAGCCGCG-CTATTGCAGCGGCATCGAACCGGTCGGGGACAAAAGATTG- 774
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 CACACGAAAGCATTGTTC-CGTATGATGCGTTCGAGACGAAAACGGGTTACATTACGCTT 435
consensus_9406#2 -ACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTC 460
consensus_9406#0 -ACGTAAATCTGTTTTCCACGCAGGTTGCATGTTTGATAAACGTCGCAAGCAACTATCTC 833
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 GGCTGTGG---------------------------------------------------- 443
consensus_9406#2 AACGCCGGC--------------------------------------------------- 469
consensus_9406#0 AACGCCGGCAAGGAGGCGAAACGCTGGGGAACGGCACACGAAAGCATTGTTCCGTATGAG 893
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 -----------------------------------------AAGTGATGCGCAGTTTGTG 462
consensus_9406#2 -----------------------------------------AAAGGAGGCGAA------- 481
consensus_9406#0 GCGTTCGAGACGAAAACGGGTTACATTACGCTTGGCTGTGGAAGTGATGCGCAGTTTGTG 953
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 TCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAAC 522
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 TCGCTCTGCCGTTTGCTAGGCGTGGCAGAGTTAGCTCAGGATGAACGTTTCGCTAGCAAC 1013
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 CGGACGCGCGTTTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGC 582
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 CGGATGCGCGTCTCACACCGGAAGGAACTGATTGCGATCCTTTCGGACATTCTGAAAAGC 1073
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 AAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATA 642
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 AAATCGTCATCGGATTGGATGCACATTTTTGAAGGCGCATCATTTCCCGTCGGTCCAATA 1133
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 AACAGCATGAAAGATGTTTTTGAGGATCACCATTTGCAGGCCATTGGAATGGTTAAGACA 702
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 AACAGCATGAAAGAGGTTTTTGAGGATCGCCATTTGCAGGCCATTGGAATGGTTAAGACA 1193
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 CTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAA 762
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 CTTCCGCATCCGTTAGCGGGAGAAGTAAAGCTTGTTGGCCCACCGGTAGTGTATGGGGAA 1253
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 GCGAAGGATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTG 822
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 GCGAAGAATGAAATTACTTCCGTTCCACCACAGCTGGGGCAGCATACAGATGAGGTCCTG 1313
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 CGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATA 882
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 CGTGGCTTACTTGGCTACGGAGATTCCGAATTGCAACGTTTGCGAAACGAGAAAATAATA 1373
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 CAATAAGCATCGGTTCGAA----------------------------------------- 901
consensus_9406#2 ------------------------------------------------------------
consensus_9406#0 CAATAAGCATCGGTTCGAAGTTGGCAATGTTATTCGCCAATCCGCCGCTAACAGCATTTA 1433
consensus_9406#3 ------------------------------------------------------------
consensus_9406#1 --------------------------------------
consensus_9406#2 --------------------------------------
consensus_9406#0 AATCCTTGTAATAAATGATCATTGTTGAGTAAGGAAAA 1471
consensus_9406#3 --------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||