These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9420#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1435 fasta sequence [GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT-TTCGTTCGTTCGTTCGAAAAG-ATTTTGTTTTTCATTAG-TGTTGTAACCGCTTTGCGTACGATATCAGT-TTTCTT-TGCTCAGCTCAAGCTTCA-TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA-TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT-ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG-AAATCGGTTTGTC-GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG-TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT----AGTAAAAAAAA] [+] EMBL BX469125 [GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTTGTTCGTTCGTTCGTTCGAAAAGCATTTTGTTTTTCATTAGCTGTTGTAACCGCTTTGCGTACGAT CGAGTGTTTCTTATGCTCAGCTCAAGCTTCAGTTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAAGTCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATC ] [+] EMBL BX603137 [ ACACGATATCGGCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG A TTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACAT CTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACT ] [+] EMBL CNS08OSQ [ cCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCAAAGTTCTCCGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG A ] [+] EMBL CNS08RUP [ tCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCAAAAAAAGGAGGACCACGTATTCGATACA ] [+] EMBL BM593869 [ ccgACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTCTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGC ] [+] EMBL BX612885 [ TGCACGTCTTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAT TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAGTCAAGCGCGATCAGCTGGTGCGCGTT ] [+] EMBL BM649332 [ ccgcccacGCGTCCG TATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGT ] [+] EMBL BM626760 [ cCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTCCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACG ] [+] EMBL BM643147 [ ccgCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTG ] [+] EMBL BM619956 [ ccGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATACCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCTAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCATCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATC ] [-] EMBL CNS08OSR [ ATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGGGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGGACTGGCCATGCACGCCGGCTAAACATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCAATTTATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATGGGGAGTAAAAAAAA] [+] EMBL BX622553 [ GCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAANGAAATGGTATAATGTGATTAGCGGAAAATCGGTTTGTCNGGTTGAGATTTtc ] [+] EMBL BM640560 [ cCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTTCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGGCTGCGCGAATG ] [+] EMBL BM653089 [ ccgGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATGGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGATCTAAAAATAAGGCTGCGCGAATGCA ] [-] EMBL CNS08RUQ [ CGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAATTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT AGAAAAAA ] consensusID : consensus_9420#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence [ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT] [+] EMBL BX469260 [ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9420#0 GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTC 60 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 GCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT 120 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 TTCGTTCGTTCGTTCGAAAAGATTTTGTTTTTCATTAGTGTTGTAACCGCTTTGCGTACG 180 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 ATATCAGTTTTCTTTGCTCAGCTCAAGCTTCATTAACCAATCTTAGCGTAATGCGATTGA 240 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 TAGAGAAGGTGTTTAATCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATG 300 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 GTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATA 360 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 TGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGA 420 consensus_9420#1 ---------------------------------------------------ACATCGGCA 9 *** * * consensus_9420#0 TGGGGGGCG-AAAACTCGAACGTGTGGTTCAACC-GGAAGCGCATT--GAGATGGACTGC 476 consensus_9420#1 CGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGC 69 * ** * ************************ *********** ********* consensus_9420#0 CCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGC 536 consensus_9420#1 C-GGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGC 128 * *************************************************** ****** consensus_9420#0 GAGCTGGCTGCCGGCGTGCCGCT--GAACCGGATCGTCGTCGGCGGTTTCTCGATG-GGC 593 consensus_9420#1 GAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCG-CGGTTTCTCGATATGGC 187 *********************** * ************** ************ *** consensus_9420#0 GGCGCACTGGCCATGCACGCCGGCTACCATCTGAATC-GCGATTTGGGCGGTGTGTTT-G 651 consensus_9420#1 GGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTG 247 *********************** ******** **** ******************** * consensus_9420#0 CCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGC 711 consensus_9420#1 CCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGC 307 ********************* **************************** ********* consensus_9420#0 AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 771 consensus_9420#1 AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 367 ************************************************************ consensus_9420#0 CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 831 consensus_9420#1 CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 427 ************************************************************ consensus_9420#0 TACCGCATC-GTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAC 890 consensus_9420#1 TACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTT-----TNTTATTNA- 481 ********* ********************************** **** * consensus_9420#0 TTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGAC 950 consensus_9420#1 TATNTGGAANANNCAGNTATAAAAC-AAAGAACAGTTTATTC-ACACGTTATTACAAAAA 539 * * ** * * * *** ** *** ***** * ** ** * consensus_9420#0 ACAACGAAG-GTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGAT 1009 consensus_9420#1 ATTCTTATTCGCTAGCTTAAAGCT------------------------------------ 563 * * * *** **** consensus_9420#0 AAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAA 1069 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 TTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAAT 1129 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 GTGATTAGCGGAAATCGGTTTGTCGGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGA 1189 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 GCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGT 1249 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 CTAAAAATAAGGTGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTC 1309 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 TTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTA 1369 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 AGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATAGTAA 1429 consensus_9420#1 ------------------------------------------------------------ consensus_9420#0 AAAAAA 1435 consensus_9420#1 ------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||