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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9421#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2024 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTCCGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCCCAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC-GATAATACA-G-GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA-GTTAAC-GCGAGCCTTGTAG-GTA-GGAAAC-GGATTGAAGAAGCCAACTAAG-GG--AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG-CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGC-TGTTCT-CCAAGAGCTCCG-TTTTTGC-GTAAATGCATCCATGTTTTAGGTATAAGAAGATTG-NTTA-TGTATG-TGTGCGTAAGCGTGTGTGTA-TGTGTAA--ATATGCGATACATTTACAAT-ACAATAGCCGG-ACA-GCTAACGCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAGCCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTGGCANGACGTGANNGCGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTCANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTGGTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCGNNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCCNATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANCAACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGAAAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAAAGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCCGAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAACCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAAACAGT]
[+] EMBL BM621971 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTCCGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCCCAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGATACGCGCACACCATGGCCTC ]
[+] EMBL BM622442 [ CCGGACGGGCTTCCCAATGATCGATGCGGCGATGAGACAGCTTTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGACGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTTGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCGGCACCGATGGTCGATCTGGCGATCGTTTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCCACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGC ]
[+] EMBL BM587045 [ ccgCTGACGCGCGGAGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCAACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCACAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACAGG GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GGGAAAGGGGAAGGTTTTGAAACCATGAAACGG ]
[+] EMBL BX609751 [ TATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGT ]
[+] EMBL BX625554 [ GCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGNGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGC TGTTCT CCAAGAGCTCCG TTTTTGC GTAAATGCATCCATGTTTTAGGTATAAGAAGATTG NTTA TGTATG TGTGCGTAAGCGTGTGTGTA TGTGTAA ATATGCGATACATTTACAAT ACAATAGCCGG ACA GCTAACG ]
[+] EMBL BX612324 [ ACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGAACGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGGCGATCTGGCGATCGTGTCGAAGC ]
[+] EMBL BX613375 [ TGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATG ]
[+] EMBL BX609934 [ CCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCTAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGTTTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTG ]
[+] EMBL AL693625 [ AGAAGTGTGTCTGAGGACTG CTGCCTCCGTACTGCAAACCTGATAATACATGTGGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAATGTTAACTGCGAGCCTTGTAGTGTATGGAAACTGGATTGAAGAAGCCAACTAAGTGG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCCAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGCTTGTTCTCCCAAGAGCTCCGTTTTTTGCGGTAAATGCATCCATGTTTTAGGTATAAGAAGATCGTCTCATTGTATGTTGTGCGTAAGCGTGTGTGTATTGTGTAAACATATGCGATACATTTACAATAACAATAGCCGGAACAGGCTAACGCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAGCCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTGGCANGACGTGANNGCGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTCANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTGGTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCGNNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCCNATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANCAACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGAAAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAAAGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCCGAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAACCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAAACAGT]
consensusID : consensus_9421#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1302 fasta sequence
[CCGGCACCATTTGATAAACCAGTTCACGTTGGGCACCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCT]
[+] EMBL BM589333 [CCGGCACCATTTGATAAACCAGTTCACGTTGGGCACCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTC ]
[+] EMBL BM578610 [ ccGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCT ]
[+] EMBL BM623493 [ ccgGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTCGCTTCCGAGCTGAAGCTGTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATACACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGCGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGT ]
[+] EMBL BX604248 [ GGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAGTATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCT]
consensusID : consensus_9421#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 670 fasta sequence
[CCGCGGACGCGTGGGCCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGTACACGCTGTG]
[+] EMBL BM645822 [CCGCGGACGCGTGGGCCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGTACACGCTGTG]
[+] EMBL BM630119 [ CAGCGCCCGATTATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGTAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGAT ]
consensusID : consensus_9421#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence
[GATGATGCCGCCACGGAGGCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTAGGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATCGGTGACAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCAAAAAAGCAAACAGGATGATGCTCTCCATTGCCGCATCCTGGCTGTTCTCCAAGAGCTCCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTGTGCGTAAGCGTGTGTGTATGTGTAAATATGCGATACATTTACAATACAATAGCCGGACAGCTAACGCTCCGGGTCCGGAGTTGAAAGCAGTGTCCCATTCGAGGTCAGCAGCCAACGACGATGCCGCCGTTCGTAGCAATGCAGCGGANGCGGAACTGNTCTCAATTAAAAATGTATACCAAATGTATAA]
[+] EMBL BX627085 [GATGATGCCGCCACGGAGGCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTAGGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATCGGTGACAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCAAAAAAGCAAACAGGATGATGCTCTCCATTGCCGCATCCTGGCTGTTCTCCAAGAGCTCCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTGTGCGTAAGCGTGTGTGTATGTGTAAATATGCGATACATTTACAATACAATAGCCGGACAGCTAACGCTCCGGGTCCGGAGTTGAAAGCAGTGTCCCATTCGAGGTCAGCAGCCAACGACGATGCCGCCGTTCGTAGCAATGCAGCGGANGCGGAACTGNTCTCAATTAAAAATGTATACCAAATGTATAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9421#0 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT 60
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 CCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGA 120
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTC 180
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 CGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCC 240
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 CAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGC 300
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 GCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGT 360
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGA 420
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGA 480
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAAC 540
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGA 600
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCG 660
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ------------------------------------------------------------
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 TGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTT 720
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 -------------------------CCGGCACCATTTGATAAACCAGTTCACGTTGGGCA 35
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 CCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGG 780
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 CCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCAT 95
consensus_9421#2 --------------------CCGCGGACGCGT---GGGCCACACCGTACCTCAGGCGCAT 37
consensus_9421#0 CGGATGATGCCGCTACGGAG-GCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGC 839
consensus_9421#3 --GATGATGCCGCCACGGAG-GCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGC 57
consensus_9421#1 TAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGT-CGGTCAGC 154
consensus_9421#2 TAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGT-CGGTCAGC 96
** * * * * ** ** * **** *** * * **** * * * * **
consensus_9421#0 CT-CCGTACCGCAAACCGATAATACAGGGACGTGCACTGAGTAACAACCGCTGCTGTGCG 898
consensus_9421#3 CT-CCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCG 116
consensus_9421#1 TCATCGTTCCG---ACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTG-TACAGCTTC 210
consensus_9421#2 TCATCGTTCCG---ACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTG-TACAGCTTC 152
*** *** ** * * ** * * * * * * * * * *
consensus_9421#0 CGATAGAGAGGACGGA-----ACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTA 953
consensus_9421#3 CGATAGAGAGGACGGA-----ACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTA 171
consensus_9421#1 CCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTG 270
consensus_9421#2 CCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTG 212
* * ****** *** * **** * * * *
consensus_9421#0 GGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTG 1013
consensus_9421#3 GGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTG 231
consensus_9421#1 GAGGTCCGCTAGGAGGCGCAAGGTGCGT---GCGAAACGATGACGATCAATAACATATTG 327
consensus_9421#2 GAGGTCCGCTAGGAGGCGCAAGGTGCGT---GCGAAACGATGACGATCAATAACATATTG 269
* * * * * ** ** * * * * * ** * * * * ** * * **
consensus_9421#0 AGCTTTCGTCT---GTTAT--TCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATAT 1068
consensus_9421#3 AGCTTTCGTCT---GTTAT--TCATATGAAGATGTTTATCGATCGGTGACAGTGGGATAT 286
consensus_9421#1 TGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGC 387
consensus_9421#2 TGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGC 329
* ***** * * ** * * ** ** * ** * *
consensus_9421#0 TTTTCT-TAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG 1127
consensus_9421#3 TTTTCT-TAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG 345
consensus_9421#1 GACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCT--TCATATTCGATG 445
consensus_9421#2 GACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCT--TCATATTCGATG 387
* * * ** ** ** * *** * * * * * * ** * * *
consensus_9421#0 -CAAAAAAGCAAACAGGATGATGCTCT-CCATTGTCGCATCCTGGCTGTTCTCCAAGAGC 1185
consensus_9421#3 -CAAAAAAGCAAACAGGATGATGCTCT-CCATTGCCGCATCCTGGCTGTTCTCCAAGAGC 403
consensus_9421#1 GCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGT 505
consensus_9421#2 GCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGT 447
* *** ** ** * ** ** * * ** ** * * ** ** *
consensus_9421#0 T--CCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAGATTGNTTATGTATGTG 1243
consensus_9421#3 T--CCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTG 461
consensus_9421#1 TGGCCGACCTTG-ACCGACAGTTTCGCGATCTTGGCG---GACAGCTGCTGGTGTTCCGG 561
consensus_9421#2 TGGCCGACCTTG-ACCGACAGTTTCGCGATCTTGGCG---GACAGCTGCTGGTGTTCCGG 503
* *** *** * * * * * * ** ** ** * *** *
consensus_9421#0 TGCGTAAGCGTGTGTGTA-TGTGTAAA-TATGCGATACATTTACAATACAATAGCCGGAC 1301
consensus_9421#3 TGCGTAAGCGTGTGTGTA-TGTGTAAA-TATGCGATACATTTACAATACAATAGCCGGAC 519
consensus_9421#1 GGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGC 621
consensus_9421#2 GGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGC 563
*** ***** ** ** * * * *** * * ** * *** * *
consensus_9421#0 AGCTAAC-GCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAG 1360
consensus_9421#3 AGCTAAC-GCTCCGGG-TCCGGA--GTTGAAA--GCAG--TGTCCCATTCGA--GGTCAG 569
consensus_9421#1 TACGAGCAGGACTGTGAACCGAT---CTGGAA--GGAGCGCGACG-ATGCGGTGGCCAAG 675
consensus_9421#2 TACGAGCAGGACTGTGAACCGAT---CTGGAA--GGAGCGCGACG-ATGCGGTGGCCAAG 617
* * * * * * * *** ** ** * ** * * ** ** * **
consensus_9421#0 CCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTG-GCANGACGTGANNG 1419
consensus_9421#3 C-AGCCAA--CGACGA--TGCCG--CCGTT--------CGTAGCA-ATGCAGCGGANGCG 613
consensus_9421#1 CTATGCCGAACGATGGATGTGCGCTGCGTG---GAGAACGTGTCGCACACGCTGTGGAAC 732
consensus_9421#2 CTATGCCGAACGATGGATGTGCGCTGCGTG---GAGAACGTGTCGTACACGCTGTG---- 670
* * * ** * ** ** ** *
consensus_9421#0 CGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTC 1479
consensus_9421#3 ---GAACTGNTCTCAATTAAAAATGTATACCAAAT-GTATAA------------------ 651
consensus_9421#1 CCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTG 792
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 ANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTG 1539
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 CATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTAC 852
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 GTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCG 1599
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 GTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATG 912
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 NNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCC 1659
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 CCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTA--GAATTGCCTTCCAGA 970
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 NATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANC 1719
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 AGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGG 1030
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 AACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGA 1779
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 AGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCC 1090
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 AAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAA 1839
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 CTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACT 1150
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 AGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCC 1899
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 GGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCG 1210
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 GAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAA 1959
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 GGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGA 1270
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 CCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAA 2019
consensus_9421#3 ------------------------------------------------------------
consensus_9421#1 ACCCGCACTACGGCGAGATGGAGCGCAATCCT---------------------------- 1302
consensus_9421#2 ------------------------------------------------------------
consensus_9421#0 ACAGT 2024
consensus_9421#3 -----
consensus_9421#1 -----
consensus_9421#2 -----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||