These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9421#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2024 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTCCGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCCCAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC-GATAATACA-G-GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA-GTTAAC-GCGAGCCTTGTAG-GTA-GGAAAC-GGATTGAAGAAGCCAACTAAG-GG--AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG-CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGC-TGTTCT-CCAAGAGCTCCG-TTTTTGC-GTAAATGCATCCATGTTTTAGGTATAAGAAGATTG-NTTA-TGTATG-TGTGCGTAAGCGTGTGTGTA-TGTGTAA--ATATGCGATACATTTACAAT-ACAATAGCCGG-ACA-GCTAACGCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAGCCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTGGCANGACGTGANNGCGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTCANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTGGTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCGNNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCCNATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANCAACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGAAAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAAAGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCCGAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAACCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAAACAGT] [+] EMBL BM621971 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTCCGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCCCAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGATACGCGCACACCATGGCCTC ] [+] EMBL BM622442 [ CCGGACGGGCTTCCCAATGATCGATGCGGCGATGAGACAGCTTTTGGCGGAAGGTTGGCTGCACCACATATTGCGCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGACGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTTGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCGGCACCGATGGTCGATCTGGCGATCGTTTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCCACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGC ] [+] EMBL BM587045 [ ccgCTGACGCGCGGAGGACTGTGGCTCAGCTGGGAGGAAGGGTTGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGATGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGATCGCGCTTGCCCGCCGGCTCAACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCACAACTGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACAGG GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GGGAAAGGGGAAGGTTTTGAAACCATGAAACGG ] [+] EMBL BX609751 [ TATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGT ] [+] EMBL BX625554 [ GCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGNGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGC TGTTCT CCAAGAGCTCCG TTTTTGC GTAAATGCATCCATGTTTTAGGTATAAGAAGATTG NTTA TGTATG TGTGCGTAAGCGTGTGTGTA TGTGTAA ATATGCGATACATTTACAAT ACAATAGCCGG ACA GCTAACG ] [+] EMBL BX612324 [ ACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGAACGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGGCGATCTGGCGATCGTGTCGAAGC ] [+] EMBL BX613375 [ TGGAAAGCTTCCCGTGAGCAGCAGATCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCGTGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTTCCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGATTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATG ] [+] EMBL BX609934 [ CCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGGCGGATGATGCCGCTACGGAGGCATAAGAGCCCGGAGAAGTGTGTGCTAGGACTGCCTGCCTCCGTACCGCAAACC GATAATACA G GGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAA GTTAAC GCGAGCCTTGTAG GTA GGAAAC GGTTTGAAGAAGCCAACTAAG GG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG CAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTG ] [+] EMBL AL693625 [ AGAAGTGTGTCTGAGGACTG CTGCCTCCGTACTGCAAACCTGATAATACATGTGGACGTGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAATGTTAACTGCGAGCCTTGTAGTGTATGGAAACTGGATTGAAGAAGCCAACTAAGTGG AAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCCAAAAAAGCAAACAGGATGATGCTCTCCATTGTCGCATCCTGGCTTGTTCTCCCAAGAGCTCCGTTTTTTGCGGTAAATGCATCCATGTTTTAGGTATAAGAAGATCGTCTCATTGTATGTTGTGCGTAAGCGTGTGTGTATTGTGTAAACATATGCGATACATTTACAATAACAATAGCCGGAACAGGCTAACGCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAGCCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTGGCANGACGTGANNGCGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTCANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTGGTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCGNNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCCNATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANCAACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGAAAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAAAGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCCGAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAACCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAAACAGT] consensusID : consensus_9421#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1302 fasta sequence [CCGGCACCATTTGATAAACCAGTTCACGTTGGGCACCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCT] [+] EMBL BM589333 [CCGGCACCATTTGATAAACCAGTTCACGTTGGGCACCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTC ] [+] EMBL BM578610 [ ccGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCT ] [+] EMBL BM623493 [ ccgGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTCGCTTCCGAGCTGAAGCTGTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATACACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGCGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGT ] [+] EMBL BX604248 [ GGATGTGCGCTGCGTGGAGAACGTGTCGCACACGCTGTGGAACCCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTGCATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTACGTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATGCCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTAGAATTGCCTTCCAGAAGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGGAGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCCCTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACTGGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAGTATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCT] consensusID : consensus_9421#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 670 fasta sequence [CCGCGGACGCGTGGGCCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGTACACGCTGTG] [+] EMBL BM645822 [CCGCGGACGCGTGGGCCACACCGTACCTCAGGCGCATTAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGATCAATAACATATTGTGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGCGACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCTTCATATTCGATGGCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGTTGGCCGACCTTGACCGACAGTTTCGCGATCTTGGCGGACAGCTGCTGGTGTTCCGGGGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGCTACGAGCAGGACTGTGAACCGATCTGGAAGGAGCGCGACGATGCGGTGGCCAAGCTATGCCGAACGATGGATGTGCGCTGCGTGGAGAACGTGTCGTACACGCTGTG] [+] EMBL BM630119 [ CAGCGCCCGATTATCCGGTGAACTATTTGCGTGTCGGTCAGCTCATCGTTCCGACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTGTACAGCTTCCCGTGTAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTGGAGGTCCGCTAGGAGGCGCAAGGTGCGTGCGAAACGATGACGAT ] consensusID : consensus_9421#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 651 fasta sequence [GATGATGCCGCCACGGAGGCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTAGGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATCGGTGACAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCAAAAAAGCAAACAGGATGATGCTCTCCATTGCCGCATCCTGGCTGTTCTCCAAGAGCTCCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTGTGCGTAAGCGTGTGTGTATGTGTAAATATGCGATACATTTACAATACAATAGCCGGACAGCTAACGCTCCGGGTCCGGAGTTGAAAGCAGTGTCCCATTCGAGGTCAGCAGCCAACGACGATGCCGCCGTTCGTAGCAATGCAGCGGANGCGGAACTGNTCTCAATTAAAAATGTATACCAAATGTATAA] [+] EMBL BX627085 [GATGATGCCGCCACGGAGGCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGCCTCCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCGCGATAGAGAGGACGGAACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTAGGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTGAGCTTTCGTCTGTTATTCATATGAAGATGTTTATCGATCGGTGACAGTGGGATATTTTTCTTAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACGCAAAAAAGCAAACAGGATGATGCTCTCCATTGCCGCATCCTGGCTGTTCTCCAAGAGCTCCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTGTGCGTAAGCGTGTGTGTATGTGTAAATATGCGATACATTTACAATACAATAGCCGGACAGCTAACGCTCCGGGTCCGGAGTTGAAAGCAGTGTCCCATTCGAGGTCAGCAGCCAACGACGATGCCGCCGTTCGTAGCAATGCAGCGGANGCGGAACTGNTCTCAATTAAAAATGTATACCAAATGTATAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9421#0 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGT 60 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 CCGATCCGGGCGGGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGA 120 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TGTCGGTACAGAACCCGCACTACGGCGAGATGGAGCGCAATCCTATCTGCCTGAACATTC 180 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 CGTGGTACAAGCCGGAGGACGATTCGCTTACCCGCTGGAAGGAGGGCCGGACGGGCTTCC 240 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 CAATGATTGATGCGGCGATGAGACAGCTGTTGGCGGAAGGTTGGCTGCACCACATATTGC 300 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 GCAACATAACCGCGACCTTCCTGACGCGCGGTGGACTGTGGCTCAGCTGGGAGGAAGGGT 360 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TGCAACACTTCCTCAAGTATCTGCTGGATGCAGACTGGTCCGTGTGTGCCGGCAACTGGA 420 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TGTGGGTGTCTTCGTCCGCGTTCGAGCGGCTGCTCGACTCTTCCAAGTGCACCTGCCCGA 480 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TCGCGCTTGCCCGCCGGCTCGACCCCAAGGGTGACTACGTGAAGCGCTACCTGCCAGAAC 540 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TGGCCAACTATCCGGCACAGTTTGTGCACGAACCGTGGAAAGCTTCCCGTGAGCAGCAGA 600 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TCGAGTACGGATGCGTGATCGGCGAAAAGTATCCAGCACCGATGGTCGATCTGGCGATCG 660 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ------------------------------------------------------------ consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 TGTCGAAGCGAAACGCGCACACCATGGCCTCGCTCAGGGAGAAGCTGGTCGATGGTGGTT 720 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 -------------------------CCGGCACCATTTGATAAACCAGTTCACGTTGGGCA 35 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 CCACACCGCCCCATTGCCGTCCGTCAGACATTGAAGAAATTCGCCAGTTCTTCTGGCTGG 780 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 CCACATTATGTGAGCCGTTTTCGCATTTTTTTTTCCCACCACACCGTACCTCAGGCGCAT 95 consensus_9421#2 --------------------CCGCGGACGCGT---GGGCCACACCGTACCTCAGGCGCAT 37 consensus_9421#0 CGGATGATGCCGCTACGGAG-GCATAAGAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGC 839 consensus_9421#3 --GATGATGCCGCCACGGAG-GCATAAAAGCCCGGAGAAGTGTGTGCGAGGACTGCCTGC 57 consensus_9421#1 TAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGT-CGGTCAGC 154 consensus_9421#2 TAGACCGCCCGTCAAAGCAGCGCCCGAATATCCGGTGAACTATTTGCGTGT-CGGTCAGC 96 ** * * * * ** ** * **** *** * * **** * * * * ** consensus_9421#0 CT-CCGTACCGCAAACCGATAATACAGGGACGTGCACTGAGTAACAACCGCTGCTGTGCG 898 consensus_9421#3 CT-CCGTACCGTAAACCGATAATACAGGGACATGCACTGAGTAACAACCGCTGCTGTGCG 116 consensus_9421#1 TCATCGTTCCG---ACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTG-TACAGCTTC 210 consensus_9421#2 TCATCGTTCCG---ACAGGTTGTAGGCAGGTTTTCGCCATTTCGCGCTTG-TACAGCTTC 152 *** *** ** * * ** * * * * * * * * * * consensus_9421#0 CGATAGAGAGGACGGA-----ACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTA 953 consensus_9421#3 CGATAGAGAGGACGGA-----ACAGAAACGAGCCTAAAGTTAACGCGAGCCTTGTAGGTA 171 consensus_9421#1 CCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTG 270 consensus_9421#2 CCGTGGAGAGGGTTTCTACCTGTGCAAATAAATACGCAGTTGCTCGCTGTGGTTCGGCTG 212 * * ****** *** * **** * * * * consensus_9421#0 GGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTG 1013 consensus_9421#3 GGAAACGGATTGAAGAAGCCAACTAAGGGAAGGGGAAGGTTTTGAAACCATGAAACGGTG 231 consensus_9421#1 GAGGTCCGCTAGGAGGCGCAAGGTGCGT---GCGAAACGATGACGATCAATAACATATTG 327 consensus_9421#2 GAGGTCCGCTAGGAGGCGCAAGGTGCGT---GCGAAACGATGACGATCAATAACATATTG 269 * * * * * ** ** * * * * * ** * * * * ** * * ** consensus_9421#0 AGCTTTCGTCT---GTTAT--TCATATGAAGATGTTTATCGATTGGTGCAAGTGGGATAT 1068 consensus_9421#3 AGCTTTCGTCT---GTTAT--TCATATGAAGATGTTTATCGATCGGTGACAGTGGGATAT 286 consensus_9421#1 TGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGC 387 consensus_9421#2 TGGTTTCGCCATGGGCTACGATTGCACGATAATCCGAGCCTGCTGGAAGCGCTCAAAAGC 329 * ***** * * ** * * ** ** * ** * * consensus_9421#0 TTTTCT-TAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG 1127 consensus_9421#3 TTTTCT-TAAAACATAGCAACATACGTGTGGTGTAGAGTTTGTTTTAATTCCATGCAACG 345 consensus_9421#1 GACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCT--TCATATTCGATG 445 consensus_9421#2 GACTGTGTTAATCAGTCCAGCGAGGCGGTGAAGCTGTTCCCGATCT--TCATATTCGATG 387 * * * ** ** ** * *** * * * * * * ** * * * consensus_9421#0 -CAAAAAAGCAAACAGGATGATGCTCT-CCATTGTCGCATCCTGGCTGTTCTCCAAGAGC 1185 consensus_9421#3 -CAAAAAAGCAAACAGGATGATGCTCT-CCATTGCCGCATCCTGGCTGTTCTCCAAGAGC 403 consensus_9421#1 GCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGT 505 consensus_9421#2 GCGAAAGTGCTGGCACGCGCATCGTCGGCTACAATCGGATGAAGTTCCTGCTGGAATCGT 447 * *** ** ** * ** ** * * ** ** * * ** ** * consensus_9421#0 T--CCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAGATTGNTTATGTATGTG 1243 consensus_9421#3 T--CCGTTTTTGCGTAAATGCATCCATGTTTTAGGTATAAGAAAATTGTTTATGTATGTG 461 consensus_9421#1 TGGCCGACCTTG-ACCGACAGTTTCGCGATCTTGGCG---GACAGCTGCTGGTGTTCCGG 561 consensus_9421#2 TGGCCGACCTTG-ACCGACAGTTTCGCGATCTTGGCG---GACAGCTGCTGGTGTTCCGG 503 * *** *** * * * * * * ** ** ** * *** * consensus_9421#0 TGCGTAAGCGTGTGTGTA-TGTGTAAA-TATGCGATACATTTACAATACAATAGCCGGAC 1301 consensus_9421#3 TGCGTAAGCGTGTGTGTA-TGTGTAAA-TATGCGATACATTTACAATACAATAGCCGGAC 519 consensus_9421#1 GGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGC 621 consensus_9421#2 GGCGACAGCGTCACCGTGCTGCGCCGTCTGTTCGAGGAGCTGAACATCAAGAAGCTGTGC 563 *** ***** ** ** * * * *** * * ** * *** * * consensus_9421#0 AGCTAAC-GCTCCGGGGTCCGGAGCGTTGGAACAGCAGGTGGTCCCATTCGAAGGGTCAG 1360 consensus_9421#3 AGCTAAC-GCTCCGGG-TCCGGA--GTTGAAA--GCAG--TGTCCCATTCGA--GGTCAG 569 consensus_9421#1 TACGAGCAGGACTGTGAACCGAT---CTGGAA--GGAGCGCGACG-ATGCGGTGGCCAAG 675 consensus_9421#2 TACGAGCAGGACTGTGAACCGAT---CTGGAA--GGAGCGCGACG-ATGCGGTGGCCAAG 617 * * * * * * * *** ** ** * ** * * ** ** * ** consensus_9421#0 CCAGCCAAACGGACGAATTGCCGGACCGNTACGGAAGACGAATTG-GCANGACGTGANNG 1419 consensus_9421#3 C-AGCCAA--CGACGA--TGCCG--CCGTT--------CGTAGCA-ATGCAGCGGANGCG 613 consensus_9421#1 CTATGCCGAACGATGGATGTGCGCTGCGTG---GAGAACGTGTCGCACACGCTGTGGAAC 732 consensus_9421#2 CTATGCCGAACGATGGATGTGCGCTGCGTG---GAGAACGTGTCGTACACGCTGTG---- 670 * * * ** * ** ** ** * consensus_9421#0 CGAAAACCTTTGTTTCCTCAAATTTCACACANCATTGTATTACCCAANCGTTGGTACTTC 1479 consensus_9421#3 ---GAACTGNTCTCAATTAAAAATGTATACCAAAT-GTATAA------------------ 651 consensus_9421#1 CCGATCGAGGTGATACAGACGAATGGTGACATCCCACCACTCACGTATCAGATGTTTCTG 792 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 ANTTCGGTGGCAAACAACNCACTTCAAACGCNCAGGAATGCCNTTTTGGGTCTCAACTTG 1539 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 CATACGGTGAACATCATCGGGGATCCACCGCGCCCGGTCGGCGCACCGAACTTCGAGTAC 852 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 GTCACACTTGTTCAACAACACACNACACTNGAGNGCATAACGAAACAGAAACAAACANCG 1599 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 GTGGAGTTTGGGCGCGTTCCGGCCCTGCTTGCCTCCGAGCTGAAGCTCTGCCAGCAGATG 912 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 NNGGACACATTGGTTNTGTNGCGCAGCCCGGACAACANCGCTGTTATATTATCCNCCCCC 1659 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 CCAGCGCCGGACGATTTTGGCATCCACTACGACGGCAACGCTA--GAATTGCCTTCCAGA 970 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 NATGANTAAGACAACGACACGCGGCTCTAAACAATCTCGCNACCCCGTCTNTGGTGAANC 1719 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 AGTGGATCGGTGGTGAGACGCGTGCCCTGGAGGCGCTCGGTGCTCGGCTAAAGCAGGAGG 1030 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 AACCANTGGTNCCACCGTGTANCGANACGTATTTCAACNACAACGGGTTNCTAGTACTGA 1779 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 AGGAAGCGTTCCGCGAGGGCTACTATCTGCCGACGCAGGCGAAGCCGGAAATTCTCGGCC 1090 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 AAACGTGTGGTGNAAAACAACACCCCTTGGACGGAAGTTAGACCCCNCGAAAGNTTATAA 1839 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 CTGCCACGTCCATGAGTGCGGCGCTGCGATTCGGCTGCCTGTCCGTGCGCATGTTCTACT 1150 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 AGCTGCGGCCTATGCTNGACGGAGACGAAAANTTCACCCCCCNCCTATTTTATGCGAGCC 1899 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 GGTGCGTGCACGATCTGTTCGCCAAGGTGCAGTCGAACAGCCAGTTCAAATATCCGGGCG 1210 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 GAAGACACTTTNNGGCGTCAGNAAANAAAGATTGATGGACATAAATGATGGCACCGGCAA 1959 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 GGCACCACATCACCGGGCAGCTGATTTGGCGCGAGTACTTCTACACGATGTCGGTACAGA 1270 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 CCCCGAAATTGTCACCGACTTANTCCACAAANCACTGNTGNACGGAGCGAGCACAGGAAA 2019 consensus_9421#3 ------------------------------------------------------------ consensus_9421#1 ACCCGCACTACGGCGAGATGGAGCGCAATCCT---------------------------- 1302 consensus_9421#2 ------------------------------------------------------------ consensus_9421#0 ACAGT 2024 consensus_9421#3 ----- consensus_9421#1 ----- consensus_9421#2 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||