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Anopheles gambiae
cluster # 9427 cluster # 9427       Sequences # 16       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9427#0 length = 1489 sequences # 14  
consensus_9427#1 length = 1243 sequences # 1  
consensus_9427#2 length = 287 sequences # 1  

consensusID : consensus_9427#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1489
fasta sequence
                              [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCAGCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAG-AGTTAACCACCTCCCCACCCCCACTCCGCCCACCATCACCACCACCACCACCACCAAAACCCCCGTCCGTCTTGGGAAAGGGGAGCAACAAATCGGAAGGACGAGAATGCTGAGAACGTTTGTTTCGGGAGGCGGCGTATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTAGCTCGTCGGTTCCGGGTGGGGTGGGATCTTTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACGGTAAATCTTTGTAGTGGGGGTAAAAATCGATTGGTAGAGAGGAAATTAGTCGCAGTCGAGTTCAGCTCTCGTACACGACGGGGCGGGGGGAGGAGTAGTATTTTTTTGCTTTGTGGTAATTAAAAAAAAAAAAGAACGAGAACTGAAACACACATCCTGCTCAA----AAACAAAAAAGAATTCATTGAACAATCGTTTTTTTACACTGCGTTGTCCCAAACGTTGGTTGTGTAGGCTGTTGTTGTTGTGCAAGCGAACATGTTGCGATTGCTCTGAGTTGGTCGCCCTGAGTAAGTGAAGAGGGGCGCCTTTTCTTGCTGCATTAAAAGACTCTCACTCTCTCTCTCTATGTATCTCTCTC-CAC-------GTGTGTGTGTAGGAGTTTTAAATGTACAAAACAAAAAAGAAACGAGAAACAGGAAAGGTAAAAAGCGCGACTCAGC--AGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTGCAAGGTGTGTGATACAACTGAAGCTGACTTTTTTTTTGCGTTCGTATTAAGGAAGAGGTCAGGCGTGATTAGTATCGAATTTTGAAAGAGAAATTAAATAAATGGTTATATTTTTCTTTTCTTTTTAAAAAAAAACGG]

[+] EMBL BM591294             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGCGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCACTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGTCAGGAACCACAGCTCGATATGACGGATTTCTACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM646488             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTTGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM655064             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTTGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACA GCGGAACGACGGGAGGGGATCGCAGCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAGAAGTAAACCACCTCCCCA  CTCACTCTGGCCACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX616219             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGTCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCATCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAG AGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AGA285365            [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCANAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAACCAAACACCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM589704             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM616683             [GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGACGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCACCATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATTATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCAGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCaccgaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AGA284069            [                                                                                                                                                                  CTACTCGCCCGCGAACGTGGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCCTAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCAGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625103             [                                                                                                                                                                                                                                                                       AGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCATTGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGAACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGATGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCAGCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAG AGTTAACCACCTCCCCACCCCCACTCCGCCCACCATCACCACCACCACCACCACCAAAACCCCCGTCCGTCTTGGGAAAGGGGAGCAACAAATCGGAAGGACGAGAATGCTGAGAACGTTTGTTTCGGGAGGCGGCGTATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTAGCTCGTCGGTTCCGGGTGGGGTGGGATCTTTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACGGTAAATCTTTGTAGTGGGGGTAAAAATCGATTGGTAGAGAGGAAATTAGTCGCAGTCGAGTTCAGCTCTCGTACACGACGGGGCGGGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX627528             [                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCAGCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAG AGTTAACCACCTCCCCACCCCCACTCCGCCCACCATCACCACCACCACCACCACCAAAACCCCCGTCCGTCTTGGGAAAGGGGAGCAACAAATCGGAAGGACGAGAATGCTGAGAACGTTTGTTTCGGGAGGCGGCGTATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTAGCTCGTCGGTTCCGGGTGGGGTGGGATCTTTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACGGTAAATCTTTGTAGTGGGGGTAAAAATCGATTGGTAGAGAGGAAATTAGTCGCAGTCGAGTTCAGCTCTCGTACACGACGGGGCGGGGGGAGGAGTAGTATTTTTTTGCTTTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX627535             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGCTTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGTGATCGCAGCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAG AGTTAACCACCTCCCCACCCCCACTCCGCCCACCATCACCACCACCACCACCACCAAAACCCCCGTCCGTCTTGGGAAAGGGGAGCAACAAATCGGAAGGACGAGAATGCTGAGAACGTTTGTTTCGGGAGGCGGCGTATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTAGCTCGTCGGTTCCGGGTGGGGTGGGATCTTTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACGGTAAATCTTTGTAGTGGGGGTAAAAATCGATTGGTAGAGAGGAAATTAGTCGCAGTCGAGTTCAGCTCTCGTACACGACGGGGCGGGGGGAGGAGTAGTATTTTTTTGCTTTGTGGTAATTAAAAAAAAAAAAGAACGAGAACTGAAACACACATCCTGCTCAA    AAACAAAAAAGAATTCATTGAACAATCGTTTTTTTACACTGCGTTGTCCCAAACGTTGGTTGTGTANGCTGTTGTTGTTGTGCAAGCGAACATGTTGCGATTTCTCTGAGTTGGTCGCCCTGAGTAAGTGAAGAAGGGCGCCTTTTCTTGCTGCAT                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM618735             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGAGAACTGAAACACACATCCTGCTCAAAAACAAACAAAAAAGAATTCATTCAACAATCGTTTTTTAACACTGCGTTGTCCCAAACGTTGGTTGTGTAGGCTGTTGTTGTTGTGCAAGCGAACATGTTGGGATTGCACTGAGTTGGTCGCCCTGCGTAAGTGAAGAGGGGCGCCTTTTCTTGTTGCATTAAAAGACTCTCACTCTCTCTCTCTATGTATCTCTCTC CAC       GTGTGTGTGTAGGAGTTTTAAATGTACAAAACAAAAAAGAAACGAGAAACAGGAAAGGTAAAAAGCGCGACTCAGC  AGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTGCAAGGTGTGTGATACAACAGAAGCTGACTTTTTTTTTGCGTTCGTATTAAGGAAGAGGTCAGGCGTGATTAGTATC                                                              ]
[-] EMBL BM623183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACATCCTGCTCAA    AAACAAAAAAGAATTCATTGAACAATCGTTTTTTTACACTGCGTTGTCCCAAACGTTGGTTGTGTAGGCTGTTGTTGTTGTGCAAGCGAACATGTTGGGATTGCTCTGAGTTGGTCGCCCTGAGTAAGTGAAGAGGGGCGCCTTTTCTTGCTGCATTAAAAGACTCT  CTCTCTCTCTCTCTGTATCTCTCTC CAC       GTGTGTGTGTAGGAGTTTTAAATGTACAAAACAAAAAAGAAACGAGAAACAGGAAAGGTAAAAAGCGCGACTCAGCAGAGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACA  ACGCATACAATTTGCAAGGTGTGTGATACAACTGAAGCTGAC TTTTTTTTGCGTTCGTATTAAGGAAGAGGTCAGGCGTGATTAGTATCGAATTTTGAAAGAGAAATTAAATAAATGGTTATATTTTTCTTTTCTTTTTAAAAAAAAACGG]
[+] EMBL BX622689             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AACAAAAAAGAATTCATTGAACAATCGTTTTTTTACACTGCGTTGTCCCAAACGTTGGTTGTGTAGGCTGTTGTTGTTGTGCAAGCGAACATGTTGCGATTGCTCTGAGTTGGTCGCCCTGAGTAAGTGAAGAGGGGCGCCTTTTCTTGCTGCATTAAAAGACTCTCACTCTCTCTCTCTATGTATCTCTCTCTCACCGTGTGTGTGTGTGTGTGGGAGTTATAAATGTACAAAACAAAAAAGAAACGAGAAACAGGAAAGGTAAAAAGCGCGACTCAGC  AGATCAGCAGCAACAACAACAACGCGCGCGCGCGCCACACGACAACACGCATACAATTTGCAAGGTGTGTGATACAACTGAAGCTGACTTTTTTTTTGCGTTCGTATTAAGGAAGAGGTCAGGCGTGATTAGTATCGAATTTTGAAAGAGAAATTAAATAAATGATTAT                             ]


>consensus_9427#0 GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGA CGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCAC CATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGT GGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCC TAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCAT TGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGA ACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGA TGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGC TTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCA GCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAGAGTTAACCACCTCCCCACCCCCA CTCCGCCCACCATCACCACCACCACCACCACCAAAACCCCCGTCCGTCTTGGGAAAGGGG AGCAACAAATCGGAAGGACGAGAATGCTGAGAACGTTTGTTTCGGGAGGCGGCGTATCTA ATAAAGCTTTGCCTTCCTCTCGTCGCCGTAGCTCGTCGGTTCCGGGTGGGGTGGGATCTT TTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAAT CGTGCTTTGGGACGGTAAATCTTTGTAGTGGGGGTAAAAATCGATTGGTAGAGAGGAAAT TAGTCGCAGTCGAGTTCAGCTCTCGTACACGACGGGGCGGGGGGAGGAGTAGTATTTTTT TGCTTTGTGGTAATTAAAAAAAAAAAAGAACGAGAACTGAAACACACATCCTGCTCAAAA ACAAAAAAGAATTCATTGAACAATCGTTTTTTTACACTGCGTTGTCCCAAACGTTGGTTG TGTAGGCTGTTGTTGTTGTGCAAGCGAACATGTTGCGATTGCTCTGAGTTGGTCGCCCTG AGTAAGTGAAGAGGGGCGCCTTTTCTTGCTGCATTAAAAGACTCTCACTCTCTCTCTCTA TGTATCTCTCTCCACGTGTGTGTGTAGGAGTTTTAAATGTACAAAACAAAAAAGAAACGA GAAACAGGAAAGGTAAAAAGCGCGACTCAGCAGATCAGCAGCAACAACAACAACGTGCGC GCGCGCCACACGACAACACGCATACAATTTGCAAGGTGTGTGATACAACTGAAGCTGACT TTTTTTTTGCGTTCGTATTAAGGAAGAGGTCAGGCGTGATTAGTATCGAATTTTGAAAGA GAAATTAAATAAATGGTTATATTTTTCTTTTCTTTTTAAAAAAAAACGG



consensusID : consensus_9427#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1243
fasta sequence
                              [CCCCGCGGTTAATTTTAAACTGTACAAAACAAACCAGAAACGTNAAACAGTGAAAGGTAAAAAGCGCGACTCAGCAGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTGCGAAGGTGTGTGATACAACACGAAGCTGACCTATANATCATCTCTCATCTAGCCGGGTTACGCTTAACTTTANCAGCGGNACGCACGCGGTACCCCAGGCGTTGACATTACGAGCTAATNCNCACANCTTCTCTNGNCANACGGAACGAACAACTTTTANCCACCTACAACCNTGGGTGACTAATACATCANACCACCNTACTNTCCCACTCTGTGGAATAACCAGGGACCGGCTATAATNTCAGTAAGCCCTACANAGAAANGCCNAATCCAACGAGNAACGNCACNTAGGGGTTTGAAANTANANTNATCAAANTANTCNACCCNTAAACAATTTATNACGCACGATANCAAATCAANCTNGTGGTAAAATTAANCNNCCCCCCTANATCAGNGGCTAATTACCATACCANTCCGAGAGCACACGCCATNAAATNTCACCACCAANTANTNTGGGCAGTATNCATCCCNCCAACCACNACCNACCACTCTCNTTAGGTCTACCCCCCAGANATGTTNTNACGATTNAACAACTTCACTGTGCGNGATACTAGTANACAAAATCNNTGNACAATTGTTGCAAAGACTCTTAGTGCNGTTNGTGTCCACCACCTGNNNAAAGACACCATGGAANTCCAACGAGCTCACCANCAGGNGGGCTGAACCACGCCTNAGANATGCACGCNGCACACACACTGGCATTTGCTCCACCATATGNTGCGGCNAACANATAATCTACAGCCCGCACGGCGNNGGAAATAATGGCGGCCGCAGACACCNACCCCGAACACACCCCCNGCACANAGGANAAANGTNNGNCNCCGCCANACNNNCGGANNCAACNGNCNAANCNTANANNCTTTAGTNTGACGAAANACGACANGAATTTAAAACACCCNTTCNCCNCNACNTCACCGACGTNTTNACCACAAANGCACAGCCCCGGTNNGAGTGGCANGANGTCCGGCCCCATTATTCNANCGCTNCNCGGCCTCGTCANGATGTTNGGTTAGCCACTNAATGATAATGAAGCGGGGNAGTGGACGNNAAANNGNCNNACGTACAACACACAANAGGGTGCGNGNGACCGACAAAGCGNGGGGGGGGN]

[+] EMBL AL696061             [CCCCGCGGTTAATTTTAAACTGTACAAAACAAACCAGAAACGTNAAACAGTGAAAGGTAAAAAGCGCGACTCAGCAGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTGCGAAGGTGTGTGATACAACACGAAGCTGACCTATANATCATCTCTCATCTAGCCGGGTTACGCTTAACTTTANCAGCGGNACGCACGCGGTACCCCAGGCGTTGACATTACGAGCTAATNCNCACANCTTCTCTNGNCANACGGAACGAACAACTTTTANCCACCTACAACCNTGGGTGACTAATACATCANACCACCNTACTNTCCCACTCTGTGGAATAACCAGGGACCGGCTATAATNTCAGTAAGCCCTACANAGAAANGCCNAATCCAACGAGNAACGNCACNTAGGGGTTTGAAANTANANTNATCAAANTANTCNACCCNTAAACAATTTATNACGCACGATANCAAATCAANCTNGTGGTAAAATTAANCNNCCCCCCTANATCAGNGGCTAATTACCATACCANTCCGAGAGCACACGCCATNAAATNTCACCACCAANTANTNTGGGCAGTATNCATCCCNCCAACCACNACCNACCACTCTCNTTAGGTCTACCCCCCAGANATGTTNTNACGATTNAACAACTTCACTGTGCGNGATACTAGTANACAAAATCNNTGNACAATTGTTGCAAAGACTCTTAGTGCNGTTNGTGTCCACCACCTGNNNAAAGACACCATGGAANTCCAACGAGCTCACCANCAGGNGGGCTGAACCACGCCTNAGANATGCACGCNGCACACACACTGGCATTTGCTCCACCATATGNTGCGGCNAACANATAATCTACAGCCCGCACGGCGNNGGAAATAATGGCGGCCGCAGACACCNACCCCGAACACACCCCCNGCACANAGGANAAANGTNNGNCNCCGCCANACNNNCGGANNCAACNGNCNAANCNTANANNCTTTAGTNTGACGAAANACGACANGAATTTAAAACACCCNTTCNCCNCNACNTCACCGACGTNTTNACCACAAANGCACAGCCCCGGTNNGAGTGGCANGANGTCCGGCCCCATTATTCNANCGCTNCNCGGCCTCGTCANGATGTTNGGTTAGCCACTNAATGATAATGAAGCGGGGNAGTGGACGNNAAANNGNCNNACGTACAACACACAANAGGGTGCGNGNGACCGACAAAGCGNGGGGGGGGN]


>consensus_9427#1 CCCCGCGGTTAATTTTAAACTGTACAAAACAAACCAGAAACGTNAAACAGTGAAAGGTAA AAAGCGCGACTCAGCAGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAA CACGCATACAATTTGCGAAGGTGTGTGATACAACACGAAGCTGACCTATANATCATCTCT CATCTAGCCGGGTTACGCTTAACTTTANCAGCGGNACGCACGCGGTACCCCAGGCGTTGA CATTACGAGCTAATNCNCACANCTTCTCTNGNCANACGGAACGAACAACTTTTANCCACC TACAACCNTGGGTGACTAATACATCANACCACCNTACTNTCCCACTCTGTGGAATAACCA GGGACCGGCTATAATNTCAGTAAGCCCTACANAGAAANGCCNAATCCAACGAGNAACGNC ACNTAGGGGTTTGAAANTANANTNATCAAANTANTCNACCCNTAAACAATTTATNACGCA CGATANCAAATCAANCTNGTGGTAAAATTAANCNNCCCCCCTANATCAGNGGCTAATTAC CATACCANTCCGAGAGCACACGCCATNAAATNTCACCACCAANTANTNTGGGCAGTATNC ATCCCNCCAACCACNACCNACCACTCTCNTTAGGTCTACCCCCCAGANATGTTNTNACGA TTNAACAACTTCACTGTGCGNGATACTAGTANACAAAATCNNTGNACAATTGTTGCAAAG ACTCTTAGTGCNGTTNGTGTCCACCACCTGNNNAAAGACACCATGGAANTCCAACGAGCT CACCANCAGGNGGGCTGAACCACGCCTNAGANATGCACGCNGCACACACACTGGCATTTG CTCCACCATATGNTGCGGCNAACANATAATCTACAGCCCGCACGGCGNNGGAAATAATGG CGGCCGCAGACACCNACCCCGAACACACCCCCNGCACANAGGANAAANGTNNGNCNCCGC CANACNNNCGGANNCAACNGNCNAANCNTANANNCTTTAGTNTGACGAAANACGACANGA ATTTAAAACACCCNTTCNCCNCNACNTCACCGACGTNTTNACCACAAANGCACAGCCCCG GTNNGAGTGGCANGANGTCCGGCCCCATTATTCNANCGCTNCNCGGCCTCGTCANGATGT TNGGTTAGCCACTNAATGATAATGAAGCGGGGNAGTGGACGNNAAANNGNCNNACGTACA ACACACAANAGGGTGCGNGNGACCGACAAAGCGNGGGGGGGGN



consensusID : consensus_9427#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 287
fasta sequence
                              [GTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCAAAACCAAAACCCCCATCCGTGTTGGGGAAAGGGAGCAACAAATCGGAAGGACGAGAATGCTGACAACGTTTGTTTCAGGAGGCGGCATATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTACCTCGTCGGTTCCGGGTGGGGTGGGATCGGTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACAGGAAATCTTTGT]

[+] EMBL BM619554             [GTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCAAAACCAAAACCCCCATCCGTGTTGGGGAAAGGGAGCAACAAATCGGAAGGACGAGAATGCTGACAACGTTTGTTTCAGGAGGCGGCATATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTACCTCGTCGGTTCCGGGTGGGGTGGGATCGGTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGCGGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACAGGAAATCTTTGT]


>consensus_9427#2 GTAACGGCGAGTCCTAACGAGCTTCTCTCCTCACCACCACCACCACCAAAACCAAAACCC CCATCCGTGTTGGGGAAAGGGAGCAACAAATCGGAAGGACGAGAATGCTGACAACGTTTG TTTCAGGAGGCGGCATATCTAATAAAGCTTTGCCTTCCTCTCGTCGCCGTACCTCGTCGG TTCCGGGTGGGGTGGGATCGGTTTTTTCTGTGTCTTTGTCCAATAATGCGTCCGTGATGC GGTCCGGTCTCGTGGAATAATCGTGCTTTGGGACAGGAAATCTTTGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9427#0      GCATCCGAATGTGTATGAGAACGGTGATCTCTGCATATCGATCCTACACCCGCCGGTCGA 60
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ------------------------------------------------------------
                                                                                  

consensus_9427#0      CGATCCGCAGAGTGGCGAACTGCCGTGCGAACGATGGAACCCGACGCAGAACGTGCGCAC 120
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ---------------------------------------------CCCCGCGGTTAATTT 15
                                                                                  

consensus_9427#0      CATCCTGCTGTCCGTGATTTCACTGCTCAACGAGCCAAACACCTACTCGCCCGCGAACGT 180
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      TAAACTGTACAAAACAAACCAGAAACGTNAAACAGTGAAAGGTAAAAAGCGCGACTCAGC 75
                                                                                  

consensus_9427#0      GGACGCGTCCGTCATGTACCGAAGATGGCGAGACTCGCACGGCAAGGACAATGAATATCC 240
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      AGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTG 135
                                                                                  

consensus_9427#0      TAACATCATACGACGACAAGCACAGGCCGCCAAGGCGGAGGCCGAAAAGGAAGGCATCAT 300
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      CGAAGGTGTGTGATACAACACGAAGCTGACCTATANATCATCTCTCATCTAGCCGGGTTA 195
                                                                                  

consensus_9427#0      TGTACCACTTACGCTAGAGGAGTATTGCATCAAGGCGAAAACGAAACCTACCGGCCAGGA 360
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      CGCTTAACTTTANCAGCGGNACGCACGCGGTACCCCAGGCGTTGACATTACGAGCTAATN 255
                                                                                  

consensus_9427#0      ACCACAGCTCGATATGACGGATTTCTACGACGACGATTACGATCTCGACACCGAAGACGA 420
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      CNCACANCTTCTCTNGNCANACGGAACGAACAACTTTTANCCACCTACAACCNTGGGTGA 315
                                                                                  

consensus_9427#0      TGATAATGCGTCGGTGGAATCGGACGGCGATGACAGTGGTAACGGCGAGTCCTAACGAGC 480
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      CTAATACATCANACCACCNTACTNTCCCACTCTGTGGAATAACCAGGGACCGGCTATAAT 375
                                                                                  

consensus_9427#0      TTCTCTCCTCACCACCACCACCACCACCGACAACAGGCGGAACGACGGGAGGGGATCGCA 540
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      NTCAGTAAGCCCTACANAGAAANGCCNAATCCAACGAGNAACGNCACNTAGGGGTTTGAA 435
                                                                                  

consensus_9427#0      GCAGCAACAGCAGTAGCGGCCGCATCGAATCCGATAGAGTTAACCACCTCCCCACCCCCA 600
consensus_9427#2      ---------------------------------------GTAACGGCGAGTCCTAACGAG 21
consensus_9427#1      ANTANANTNATCAAANTANTCNACCCNTAAACAATTTATNACGCACGATANCAAATCAAN 495
                                                                 *       *    *   

consensus_9427#0      CTCCGCCCACCATCACCACCACCACCACCACCAAAACCC-----CCGT-CCGTCTTGGGA 654
consensus_9427#2      CTTCTCTCCTCACCACCACCACCACCAAAACCAAAACCC-----CCAT-CCGTGTTGGGG 75
consensus_9427#1      CTNGTGGTAAAATTAANCNNCCCCCCTANATCAGNGGCTAATTACCATACCANTCCGAGA 555
                      **         *  *      ** **   * **    *      ** * **     * * 

consensus_9427#0      AAGGGGAGCAACAAATCGGAAGGACGAG-AATGCTGAGAACGTTTGTTTCGGGAG--GCG 711
consensus_9427#2      AAAGGGAGCAACAAATCGGAAGGACGAG-AATGCTGACAACGTTTGTTTCAGGAG--GCG 132
consensus_9427#1      GCACACGCCATNAAATNTCACCACCAANTANTNTGGGCAGTATNCATCCCNCCAACCACN 615
                              **  ****   *    * *  * *   *  *   *   *  *   *    * 

consensus_9427#0      GCGTA----TCTAATAAAGCTTTGCCTTCCTCT-CGTCGCCGTAGCTCGTCGGTTCCGGG 766
consensus_9427#2      GCATA----TCTAATAAAGCTTTGCCTTCCTCT-CGTCGCCGTACCTCGTCGGTTCCGGG 187
consensus_9427#1      ACCNACCACTCTCNTTAGGTCTACCCCCCAGANATGTTNTNACGATTNAACAACTTCA-- 673
                       *  *    ***  * * *  *  **  *      **         *   *   * *   

consensus_9427#0      TGGGGTGGGATCTTTTTTTTCTGTGTCTTTGTCCAATAAT-----GCGTCCGTGATGCGG 821
consensus_9427#2      TGGGGTGGGATCGGTTTTTTCTGTGTCTTTGTCCAATAAT-----GCGTCCGTGATGCGG 242
consensus_9427#1      CTGTGCGNGATACTAGTANACAAAATCNNTGNACAATTGTTGCAAAGACTCTTAGTGCNG 733
                        * * * ***     *   *    **  **  ****  *          * *  *** *

consensus_9427#0      TCCGGTCTCGTG----GAATAATCGTGCTTTGGGAC----GGTAAATCTTTGTAGTGGGG 873
consensus_9427#2      TCCGGTCTCGTG----GAATAATCGTGCTTTGGGAC----AGGAAATCTTTGT------- 287
consensus_9427#1      TTNGTGTCCACCACCTGNNNAAAGACACCATGGAANTCCAACGAGCTCACCANCAGGNGG 793
                      *  *    *       *   **     *  *** *        *  **            

consensus_9427#0      GTAAAAATCGATTGGTAGAGAGGAAATTAGTCGCAGTCGAGT-TCAGCTCTCGTACACGA 932
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      GCTGAACCACGCCTNAGANATGCACGCNGCACACACACTGGCATTTGCTCCACCATATGN 853
                                                                                  

consensus_9427#0      CGGGGCGGGGGGAGGAGTAGTATTTTTTTGCTTTGTGGTAATTAAAAAAAAAAAAGAACG 992
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      TGCGGCNAACANATAATCTACAGCCCGCACGGCGNNGGAAATAATGGCGGCCGCAGACAC 913
                                                                                  

consensus_9427#0      AGAACTGAAACACACATCCTGCTCAAAAACAAAAAAGAATTCATTGAACAATCGTTTTTT 1052
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      CNACCCCGAACACACCCCCNGCACANAGGANAAANGTNNGNCNCCGCCANACNNNCGGAN 973
                                                                                  

consensus_9427#0      TACACTGCGTTGTCCCAAACGTTGGTTGTGTAGGCTGTTGTTGTTGTGCAAGCGAACATG 1112
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      NCAACNGN------CNAANCNTANANNCTTTAGTNTGACGAAANACGACANGAATTTAAA 1027
                                                                                  

consensus_9427#0      TTGCGATTGCTCTGAGTTGGTCGCCCTGAGTAAGTGAAGAGGGGCGCCTTTTCTTGCTGC 1172
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ACACCCNTTCNCCNCNACNTCACCGACGTNTTNACCACAAANGCACAGCCCCGGTNNGAG 1087
                                                                                  

consensus_9427#0      ATTAAAAGACTCTCACTCTCTCTCTCTATGTATCTCTCTCCACGTGTGTGTGTAGGAGTT 1232
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      TGGCANGANGTCCGGCCCCATTATTCNANCGCTNCNCGGCCTCGTCANGATGTTNGGTTA 1147
                                                                                  

consensus_9427#0      TTAAATGTACAA-AACAAAAAAGAAACGAGAAACAGGAAAGGTAAAAAGCGCGACTCAGC 1291
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      GCCACTNAATGATAATGAAGCGGGGNAGTGGACGNNAAANNGNCNNACGTACAACACACA 1207
                                                                                  

consensus_9427#0      AGATCAGCAGCAACAACAACAACGTGCGCGCGCGCCACACGACAACACGCATACAATTTG 1351
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ANAGGGTGCGNGNGACCGACAAAGCGNGGGGGGGGN------------------------ 1243
                                                                                  

consensus_9427#0      CAAGGTGTGTGATACAACTGAAGCTGACTTTTTTTTTGCGTTCGTATTAAGGAAGAGGTC 1411
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ------------------------------------------------------------
                                                                                  

consensus_9427#0      AGGCGTGATTAGTATCGAATTTTGAAAGAGAAATTAAATAAATGGTTATATTTTTCTTTT 1471
consensus_9427#2      ------------------------------------------------------------
consensus_9427#1      ------------------------------------------------------------
                                                                                  

consensus_9427#0      CTTTTTAAAAAAAAACGG 1489
consensus_9427#2      ------------------
consensus_9427#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)