cluster # 9428

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Anopheles gambiae
cluster # 9428 cluster # 9428 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9428#0 length = 1021 sequences # 12
consensus_9428#1 length = 682 sequences # 1

consensus_9428#2 length = 557 sequences # 1
consensus_9428#3 length = 470 sequences # 2

consensusID : consensus_9428#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1021
fasta sequence

                              [CCGTTTTATACACCGCGGCCGTCGCCGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC-AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGATGCT-GGGTTTGTTGCCCGGAGCTGGTGGCACTCAGCGACTGCCAAAACTGACCTCCATCCCAACCGCATTGGACCTCGCCCTTACCGGCAAGTCGGTAAAGGCCGACAAGGCAAAGAAGCTGGGAATCGTGGACATGCTGGTGAACCCGCTTGGTCCCGGACTGAAGCCAGCCGATCAAAACACACTCCAGTACCTGGAACAAGTGGCGATTCAAGTCGCGAAGGATCTTGCCTCGGAGAAGCTGAAGGTAAACCGCCAAAAGACTGGCTTGGTGGCCAAGGTGACGGACTTTGCGTTCGGCATCGAATGGGTCAAGAACAAAGTGTTCGAGAAGGCAC]

[+] EMBL BM604652             [CCGTTTTATACACCGCGGCCGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTTAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATTGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTATAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGATGCTGGGGTTTG                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM581590             [                 ccgGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAA                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM605118             [                        CCGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGATGCT GGG                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM591545             [                        CCGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGA                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM596737             [                       ccgGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM607726             [                         ccGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGATGCT GGGTTTGTTGCCCGGAGCTGGTGG                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM614434             [                           ccgCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCCCGAAGTGATGCT GGGTTTGTTGCCCGGA                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM634341             [                           ccgCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAG                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM652701             [                           ccgCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM614115             [                           ccgCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM576470             [                                ccgGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGC AAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAA                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM606213             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAAAACGGTCGTAGGATTGCCCGAAGTGATGCT GGGTTTGTTGCCCGGAGCTGGTGGCACTCAGCGACTGCCAAAACTGACCTCCATCCCAACCGCATTGGACCTCGCCCTTACCGGCAAGTCGGTAAAGGCCGACAAGGCAAAGAAGCTGGGAATCGTGGACATGCTGGTGAACCCGCTTGGTCCCGGACTGAAGCCAGCCGATCAAAACACACTCCAGTACCTGGAACAAGTGGCGATTCAAGTCGCGAAGGATCTTGCCTCGGAGAAGCTGAAGGTAAACCGCCAAAAGACTGGCTTGGTGGCCAAGGTGACGGACTTTGCGTTCGGCATCGAATGGGTCAAGAACAAAGTGTTCGAGAAGGCAC]




>consensus_9428#0
CCGTTTTATACACCGCGGCCGTCGCCGGACCGAGAGTCGAAGCCATTTATTTTATTTATG
TTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGC
GTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATG
CAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCC
ATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGAC
AATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAG
GTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCG
GCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTC
GAGCAGTGCAAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTC
AGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGT
GGAGGGCTAGAGTTGGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACG
GTCGTAGGATTGCCCGAAGTGATGCTGGGTTTGTTGCCCGGAGCTGGTGGCACTCAGCGA
CTGCCAAAACTGACCTCCATCCCAACCGCATTGGACCTCGCCCTTACCGGCAAGTCGGTA
AAGGCCGACAAGGCAAAGAAGCTGGGAATCGTGGACATGCTGGTGAACCCGCTTGGTCCC
GGACTGAAGCCAGCCGATCAAAACACACTCCAGTACCTGGAACAAGTGGCGATTCAAGTC
GCGAAGGATCTTGCCTCGGAGAAGCTGAAGGTAAACCGCCAAAAGACTGGCTTGGTGGCC
AAGGTGACGGACTTTGCGTTCGGCATCGAATGGGTCAAGAACAAAGTGTTCGAGAAGGCA
C

consensusID : consensus_9428#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 682
fasta sequence

                              [CCGCCCACGCGTCCGCGCGGCCGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGTAAGTTACCAGAGTGCTGTCCGTTTTGCTGCCTCGACCTCGGACGTTTTATTAATCGACCGATTGTGTATTTCCCCGCTTGCTCTCCAACAGGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGG]

[+] EMBL BM644286             [CCGCCCACGCGTCCGCGCGGCCGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGTAAGTTACCAGAGTGCTGTCCGTTTTGCTGCCTCGACCTCGGACGTTTTATTAATCGACCGATTGTGTATTTCCCCGCTTGCTCTCCAACAGGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGGTGGCCGCCATCAACGG]




>consensus_9428#1
CCGCCCACGCGTCCGCGCGGCCGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTA
TGTTCGTTTTGTCCATAGCTTTTTAGAAAAGTAAGTTACCAGAGTGCTGTCCGTTTTGCT
GCCTCGACCTCGGACGTTTTATTAATCGACCGATTGTGTATTTCCCCGCTTGCTCTCCAA
CAGGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGA
AGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGG
CGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGC
CGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACT
CGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCC
TGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGG
GCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGTCGAGGCGG
CAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAAC
CTGTGGTGGCCGCCATCAACGG

consensusID : consensus_9428#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 557
fasta sequence

                              [GAATCCCCGAGGTTTGTGATCACGCTGGACTCGCCCGGTGTCAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGTCGAGGCNGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGTGTGGCCGCCATACAACGGCGTNATGCTATGGGTGGAGAGGCTAGAGTNTTGGGCCTTGCCTGTCACTAACGAGTANNCGCTTAAGGACTAACCGAAAACGGTCGTAGGATTGACCGCAAGTGATAGCTGGGTATAAGGATGCACCGGANCTGGTGGNACTACAGACGACTGGCAAAACCTGACCTTCCATCCCAACCGGCATTGGACCTCGCCCTTACCTGGCANACGTCGGTCAAACGGCCGACCAAGGCCAAACGAAGCCTGGGAATCNGTGGACACA]

[+] EMBL AL694847             [GAATCCCCGAGGTTTGTGATCACGCTGGACTCGCCCGGTGTCAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGTCGAGGCNGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGTGTGGCCGCCATACAACGGCGTNATGCTATGGGTGGAGAGGCTAGAGTNTTGGGCCTTGCCTGTCACTAACGAGTANNCGCTTAAGGACTAACCGAAAACGGTCGTAGGATTGACCGCAAGTGATAGCTGGGTATAAGGATGCACCGGANCTGGTGGNACTACAGACGACTGGCAAAACCTGACCTTCCATCCCAACCGGCATTGGACCTCGCCCTTACCTGGCANACGTCGGTCAAACGGCCGACCAAGGCCAAACGAAGCCTGGGAATCNGTGGACACA]




>consensus_9428#2
GAATCCCCGAGGTTTGTGATCACGCTGGACTCGCCCGGTGTCAAGTGAACTCGCTAAATG
CCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCA
GCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCA
TGCTCGAGCAGTGCAAAACGGTCGAGGCNGGCAACGAAGGTGTCACACGAGGGCCAGATT
CAGTTCAGCAAGCTGGAGAAATCCCGCAAACCTGTGTGTGGCCGCCATACAACGGCGTNA
TGCTATGGGTGGAGAGGCTAGAGTNTTGGGCCTTGCCTGTCACTAACGAGTANNCGCTTA
AGGACTAACCGAAAACGGTCGTAGGATTGACCGCAAGTGATAGCTGGGTATAAGGATGCA
CCGGANCTGGTGGNACTACAGACGACTGGCAAAACCTGACCTTCCATCCCAACCGGCATT
GGACCTCGCCCTTACCTGGCANACGTCGGTCAAACGGCCGACCAAGGCCAAACGAAGCCT
GGGAATCNGTGGACACA

consensusID : consensus_9428#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 470
fasta sequence

                              [CCGCCCACGCGTCCGGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGG]

[+] EMBL BM611557             [CCGCCCACGCGTCCGGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGG]
[+] EMBL BM642698             [                                                                                                                                tCGTAACACTGATCGGTGCGGCAATGCACCTAAATGTGACCTTTGGACAGGCGCTTCTACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCCGGTCGGCAAGCACATGAAGACACACATCATGGACAATGTGATGGTGATCACGCTGGACTCACCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACATTCCGAGTTCCATGCCGT                                                                                                                 ]




>consensus_9428#3
CCGCCCACGCGTCCGGCCATTTATTTTATTTATGTTCGTTTTGTCCATAGCTTTTTAGAA
AAGCTTCGGATAGGATTGTGAGGAAGCTATCAGCGTAGAAAGTGCATAATAAAAAACGAA
GATGGCCAGCGTAAGACTGATCGGTGCGGCAATGCAGCGAAATGTGACCTTTGGACAGGC
GCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCACGGCAGCGCC
GGCCGGCAAGCACATGAAGACACGCATCGTGGACAATGTGATGGTGATCACGCTGGACTC
GCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGATGCCGTCCT
GCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGGCAAGCCGGG
CTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9428#1      CCGCCCACGCGTCCGCGCGGCCGTCGTAGGACCGAGAGTCGAAGCCATTTATTTTATTTA 60
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      ------------------------------------------------------------
consensus_9428#2      --------------------------------------GAATCCCCGAGGTTTGTGATCA 22
                                                                                  

consensus_9428#1      TGTTCGTTTTGTCCATAGCTTTTTAGAAAAGTAAGTTACCAGAGTGCTGTCCGT-TTTGC 119
consensus_9428#3      -----------------------------------------------------------C 1
consensus_9428#0      --------------------------------CCGTTTTATACACCGCGGCCGT-CGCCG 27
consensus_9428#2      CGCTGGACTCGCCCGGTGTCAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTCGA 82
                                                                                  

consensus_9428#1      TGCCTCGACCTCGGACGTTTTATTAA--TCGACCGATTGTGTATTT-CCCCGCTTGCTCT 176
consensus_9428#3      CGCCCACGCGTCCGGCCATTTATT----TTATTTA--TGTTCGTTT-TGTCCATAGCTTT 54
consensus_9428#0      GACCGAGAGTCGAAGCCATTTATT----TTATTTA--TGTTCGTTT-TGTCCATAGCTTT 80
consensus_9428#2      TGCCGTCCTGCGCGAGGTGGAAACAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTCTGG 142
                        **                 *                *              *  **  

consensus_9428#1      CCA-ACAGGCTTCGGATAGGATTGTGAGGAAGCTATCA-GCGTAGAAAGTGCATAATAAA 234
consensus_9428#3      TTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCA-GCGTAGAAAGTGCATAATAAA 113
consensus_9428#0      TTAGAAAAGCTTCGGATAGGATTGTGAGGAAGCTATCA-GCGTAGAAAGTGCATAATAAA 139
consensus_9428#2      CAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAACGGT 202
                        *     *** *     **   ***  **   ** ** **      ****** **    

consensus_9428#1      AAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGG--CAATGCAGCGAAATGTGACCTT 292
consensus_9428#3      AAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGG--CAATGCAGCGAAATGTGACCTT 171
consensus_9428#0      AAACGAAGATGGCCAGCGTAAGACTGATCGGTGCGG--CAATGCAGCGAAATGTGACCTT 197
consensus_9428#2      CGAGGCNGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAAAT 262
                        * *  *    * *  **   **     **   *   ** * **** *  **      *

consensus_9428#1      TGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCAC 352
consensus_9428#3      TGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCAC 231
consensus_9428#0      TGGACAGGCGCTTCGACTGAAGGCACTTCAATCGCAAATGGCCATGCGGTATCTGGCCAC 257
consensus_9428#2      CCCGCAAAC-CTGTGTGTGGCCGCCATACAACGGCGTNATGCTATGGGTGGAGAGGCTAG 321
                          **  * **  *  **   **  * ***  **     ** *** *      *** * 

consensus_9428#1      GGCAGCGCCGGCCGGCAAGCAC--ATGAAGACACGCATCGTGGACAATGTGATGGTGATC 410
consensus_9428#3      GGCAGCGCCGGCCGGCAAGCAC--ATGAAGACACGCATCGTGGACAATGTGATGGTGATC 289
consensus_9428#0      GGCAGCGCCGGCCGGCAAGCAC--ATGAAGACACGCATCGTGGACAATGTGATGGTGATC 315
consensus_9428#2      AGTNTTGGGCCTTGCCTGTCACTAACGAGTANNCGC-TTAAGGACTAACCGAAAACGGTC 380
                       *    *      * *   ***  * **  *  *** *   **** *   **    * **

consensus_9428#1      ACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTC 470
consensus_9428#3      ACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTC 349
consensus_9428#0      ACGCTGGACTCGCCCGGTGTCAAAGTGAACTCGCTAAATGCCGAGGTACAGTCCGAGTTC 375
consensus_9428#2      --GTAGGATTGACCGCAAGTGATAGCTGGGTATAAGGATGCACCGGANCTGGTGGNACTA 438
                        *  *** *  **    ** * **     *      ****   **  * *   *   * 

consensus_9428#1      GATGCCGTCCTGCGCGAGGTGGAAA-CAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTC 529
consensus_9428#3      GATGCCGTCCTGCGCGAGGTGGAAA-CAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTC 408
consensus_9428#0      GATGCCGTCCTGCGCGAGGTGGAAA-CAAACCCGGCCGTCAGCTCGGCGGTGCTGATCTC 434
consensus_9428#2      CA-GACGACTGGCAAAACCTGACCTTCCATCCCAACCGGCA-TTGGACCTCGCCCTTACC 496
                       * * ** *  **   *  **     * * ***  *** **  * * *   **   *  *

consensus_9428#1      TGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAAC 589
consensus_9428#3      TGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAAC 468
consensus_9428#0      TGGCAAGCCGGGCTGCTTCGTGGCCGGTGCCGACATTACCATGCTCGAGCAGTGCAAAAC 494
consensus_9428#2      TGGCANAC--GTCGGTCAAACGGCCGACCAAGGCCAAACGAAGCCTGGGAATCNGTGGAC 554
                      *****  *  * * *      *****     * *   ** * **  * * *       **

consensus_9428#1      GGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAA 649
consensus_9428#3      GG---------------------------------------------------------- 470
consensus_9428#0      GGTCGAGGCGGCAACGAAGGTGTCACACGAGGGCCAGATTCAGTTCAGCAAGCTGGAGAA 554
consensus_9428#2      ACA--------------------------------------------------------- 557
                                                                                  

consensus_9428#1      ATCCCGCAAACCTGTGGTGGCCGCCATCAACGG--------------------------- 682
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      ATCCCGCAAACCTGTGGTGGCCGCCATCAACGGCGTTTGCTTGGGTGGAGGGCTAGAGTT 614
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      GGCCCTTGCCTGTCACTACCGAGTAGCGCTTAAGGATAAGAAAACGGTCGTAGGATTGCC 674
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      CGAAGTGATGCTGGGTTTGTTGCCCGGAGCTGGTGGCACTCAGCGACTGCCAAAACTGAC 734
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      CTCCATCCCAACCGCATTGGACCTCGCCCTTACCGGCAAGTCGGTAAAGGCCGACAAGGC 794
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      AAAGAAGCTGGGAATCGTGGACATGCTGGTGAACCCGCTTGGTCCCGGACTGAAGCCAGC 854
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      CGATCAAAACACACTCCAGTACCTGGAACAAGTGGCGATTCAAGTCGCGAAGGATCTTGC 914
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      ------------------------------------------------------------
consensus_9428#3      ------------------------------------------------------------
consensus_9428#0      CTCGGAGAAGCTGAAGGTAAACCGCCAAAAGACTGGCTTGGTGGCCAAGGTGACGGACTT 974
consensus_9428#2      ------------------------------------------------------------
                                                                                  

consensus_9428#1      -----------------------------------------------
consensus_9428#3      -----------------------------------------------
consensus_9428#0      TGCGTTCGGCATCGAATGGGTCAAGAACAAAGTGTTCGAGAAGGCAC 1021
consensus_9428#2      -----------------------------------------------