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Anopheles gambiae
cluster # 9461 cluster # 9461       Sequences # 17       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9461#0 length = 1103 sequences # 15  
consensus_9461#1 length = 674 sequences # 1  
consensus_9461#2 length = 663 sequences # 1  

consensusID : consensus_9461#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1103
fasta sequence
                              [TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT-GT-GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC-TTTTTCTC-CT-CGCG-CA-CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC-CTTTTTCAACTGACTC-TC-TAGCTTCGCCTGTTCCCGC-TTTTCCCGGGCCAGTGCCTGCACGTCGGC-AAAGTTTGTAT-TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT-CC-TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT]

[+] EMBL CNS09P7Z             [TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTTTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS095NS             [                                                                                                         ttttatTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATT                                                                 ]
[+] EMBL CNS0947H             [                                                                                                                   GTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTCTCTTTTTCAACTGACTC TC TAGCTTCGCCTGTGCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTGCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGA                                                                                                                                                   ]
[+] EMBL CNS09O3S             [                                                                                                                                                 CTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTAGTCGGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BM602016             [                                                                                                                                                                                  GTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAGCATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTTCCC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGcgg                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08QDB             [                                                                                                                                                                                                                                                                    AAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAAAAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGAAAGGACGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL BX623425             [                                                                                                                                                                                                                                                                                                             ggAGCAATCGAANCAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGNG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTNGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCNGCNTTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGNTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCA                                                     ]
[-] EMBL CNS095NR             [                                                                                                                                                                                                                                                                                                                                                   TCCTTCGCTTCCAGCGACAGGGCGCTACCGACGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT TCTG CG CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TCTTAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCCCCCACACCCAGT]
[-] EMBL CNS09P7Y             [                                                                                                                                                                                                                                                                                                                                                                                        TCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTTCTCTCTACAGG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAA                                     ]
[-] EMBL CNS08QDA             [                                                                                                                                                                                                                                                                                                                                                                                             aTTGCCGGTTTTGCGCTTTTCC TTTTTCTC CT CCCGCCG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACG                                                                                                                                                                                                    ]
[-] EMBL CNS0947G             [                                                                                                                                                                                                                                                                                                                                                                                                           GCTTTTCC TTTTTCTC CT TCAG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTCTTC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACACACACCCA  ]
[-] EMBL BX620627             [                                                                                                                                                                                                                                                                                                                                                                                                                           C CT CGCG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTG                                                                                         ]
[-] EMBL AL930303             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTATGTTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CCGTCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTG AAACTTGTGTG ACTTCTGTTCGGCTAACCtcgg      ]
[-] EMBL BX625127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               C TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGC               ]
[-] EMBL BX611460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTGTTCCCGC TTTTCCCGGGCCAGTGCTTGCACGTCGGCAAAAGTTTGTAT TTTTCACAAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCAAGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATT                                                                                                                               ]


>consensus_9461#0 TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATT AATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGG CATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGT TAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTGTG GCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAG CAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGC GCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTCTCCTCGCGCACTG GCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTCCTTTTTCAACTGACTCTCTAGCTTCGC CTGTTCCCGCTTTTCCCGGGCCAGTGCCTGCACGTCGGCAAAGTTTGTATTTTTCACCAG CTTCGGATCGGAACTGGTCGCCCCTTCCTCGTCCTCTTCGTCTGGTTCACTTTCAGAGAG CTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCG TTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTC TAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAG GATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAG AGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACC GAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTC GTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCT AATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTC TGTTCGGCTCACCCACACCCAGT



consensusID : consensus_9461#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG]

[-] EMBL BM633376             [ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG]


>consensus_9461#1 ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCC AATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCT TGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTT TCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATG GGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGC TCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCC GCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAAC GTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGT CCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCAC GCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGAT TGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAA GATATTTTGTGCGG



consensusID : consensus_9461#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 663
fasta sequence
                              [AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC]

[-] EMBL AL934953             [AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC]


>consensus_9461#2 AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCN GACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTG TGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGC GGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGA ATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTT TTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANA TTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAG AGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTG TACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGA ACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAA TGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNA TTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9461#0      TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATT 60
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      AATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGG 120
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGT 180
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTGTG 240
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      GCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAG 300
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGC 360
consensus_9461#1      ------------------------------------------------------------
consensus_9461#2      ------------------------------------------------------------
                                                                                  

consensus_9461#0      GCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTCTCCTCGCGCACTG 420
consensus_9461#1      -----ATCCGTCGTTCCTCCTCGGTGTACTCTCG-TTCGACTTTAGTCGCTAGC-TTTTG 53
consensus_9461#2      --------------AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATC--TCCG 44
                                        *   *  *                *          *     *

consensus_9461#0      GCGCTGCT-TCTCCCGGTCCTGTTTGTCCTTCTCCTTTTTCAACTGACTCTCTAGCTTCG 479
consensus_9461#1      TCCCTCCA-ATAGCTTGGCTAATTGAACCTCCACATCT---AGTTTGGGCTTCGACGCC- 108
consensus_9461#2      CCANNNCACAAGGCCNGACCAAGGGCACCGACA----------TTAAGCCACNCACACAA 94
                       *    *      *  * *        **  *            *    *     *    

consensus_9461#0      CCTGTTCCCGCTT-TTCCCGGGCCAGTGCCTGCACGTCGGCAAAGTTTGTATTTTTCACC 538
consensus_9461#1      CCGGCCGACTCTT-GGCTGTGGCAAATGTTC-CAC-TTGTCCAGGATTTCGTTGATGAAC 165
consensus_9461#2      GNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCAT-NTANATATNGCGGCANTATANATA 153
                                **    *     *   **    **        *         *    *  

consensus_9461#0      AGCTTCGGATCGGAACTGGTCGCCCCTTCCTCGTCC--TCTTCGTCTGGTTC----ACTT 592
consensus_9461#1      GGTTCCAGATCTGT-TTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGC----ACCA 220
consensus_9461#2      CACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCT 213
                             *                        *                        *  

consensus_9461#0      TCAGAGAGCTGACTGTATTGCATAAGTATCTGT-TCCTTGATCCGTCGTTCCTCCTCGGT 651
consensus_9461#1      GCAGCATTTGGGATGACATGGGACAGAAATAGC-CGATGCGTTAGTTGTTT-TGCTAAAT 278
consensus_9461#2      ACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGAC 273
                       *            *         ** *         *   *   *   *    *     

consensus_9461#0      GTACTCTCGTTCGAC-TTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGC- 709
consensus_9461#1      TTATACCGAATCA---CACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCT 335
consensus_9461#2      TTTCATAGCTTCAGCCTGTTCCCGCTTTTGC-CNCAGGGCCAGTGCACTGACACGTCAGG 332
                       *        **          ****                 *     * *   *    

consensus_9461#0      --ACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGA-CTCTTGGCTGTGGCAAATG 766
consensus_9461#1      GAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGA-CACCGCGGCATGCAATAAG 394
consensus_9461#2      CAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNG 392
                                    * *     *       *       ** *     *           *

consensus_9461#0      TTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCC 826
consensus_9461#1      TACACTTTGGTCGGGGAATCGCAAACGTAC-----------------AATGATAGCGCCC 437
consensus_9461#2      TCCTATTCGATCATGGCTTCACTTTCAGAGAGCTA------------GACTGTATTGCAT 440
                      * *   * *  *  *   **        *                   *   **  **  

consensus_9461#0      AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 885
consensus_9461#1      AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 496
consensus_9461#2      AAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATT--T 498
                      * * **    **         *  * ** * ** * * * *  ** * *** *   *   

consensus_9461#0      GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 945
consensus_9461#1      GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 556
consensus_9461#2      AGT--CGCTAGCTTTTGTCACGCTC-CAATAGCTT--GGCTAATTGAACCTCCAGC-ATG 552
                       **   *   *        ****** *    ** *  *    *   * * ** *** * *

consensus_9461#0      CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTA 1004
consensus_9461#1      CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCG--TCGGCAGGATTGCGCTTAACCTA 613
consensus_9461#2      CTAGTT-TGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTG 611
                      * *  * * *   *** * * *** * * * *      * ** **     * *  ** * 

consensus_9461#0      TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAA 1064
consensus_9461#1      TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCG 673
consensus_9461#2      TC-CAGGAT-TTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC------ 663
                      *  ***  * ** * * **   * **    *  *      ***       ***       

consensus_9461#0      AACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT 1103
consensus_9461#1      G-------------------------------------- 674
consensus_9461#2      ---------------------------------------
                                                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)