These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1103 fasta sequence [TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT-GT-GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC-TTTTTCTC-CT-CGCG-CA-CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC-CTTTTTCAACTGACTC-TC-TAGCTTCGCCTGTTCCCGC-TTTTCCCGGGCCAGTGCCTGCACGTCGGC-AAAGTTTGTAT-TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT-CC-TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT] [+] EMBL CNS09P7Z [TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTTTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAA ] [+] EMBL CNS095NS [ ttttatTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATT ] [+] EMBL CNS0947H [ GTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTCTCTTTTTCAACTGACTC TC TAGCTTCGCCTGTGCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTGCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGA ] [+] EMBL CNS09O3S [ CTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTAGTCGGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATC ] [-] EMBL BM602016 [ GTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAGCATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTTCCC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGcgg ] [+] EMBL CNS08QDB [ AAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAAAAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGAAAGGACGCT ] [-] EMBL BX623425 [ ggAGCAATCGAANCAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGNG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTNGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCNGCNTTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGNTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCA ] [-] EMBL CNS095NR [ TCCTTCGCTTCCAGCGACAGGGCGCTACCGACGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT TCTG CG CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TCTTAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCCCCCACACCCAGT] [-] EMBL CNS09P7Y [ TCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTTCTCTCTACAGG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAA ] [-] EMBL CNS08QDA [ aTTGCCGGTTTTGCGCTTTTCC TTTTTCTC CT CCCGCCG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACG ] [-] EMBL CNS0947G [ GCTTTTCC TTTTTCTC CT TCAG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTCTTC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACACACACCCA ] [-] EMBL BX620627 [ C CT CGCG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTG ] [-] EMBL AL930303 [ CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTATGTTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CCGTCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTG AAACTTGTGTG ACTTCTGTTCGGCTAACCtcgg ] [-] EMBL BX625127 [ C TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGC ] [-] EMBL BX611460 [ CCTGTTCCCGC TTTTCCCGGGCCAGTGCTTGCACGTCGGCAAAAGTTTGTAT TTTTCACAAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCAAGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATT ] consensusID : consensus_9461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence [ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG] [-] EMBL BM633376 [ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG] consensusID : consensus_9461#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence [AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC] [-] EMBL AL934953 [AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9461#0 TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATT 60 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 AATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGG 120 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 CATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGT 180 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 TAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTGTG 240 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 GCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAG 300 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 CAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGC 360 consensus_9461#1 ------------------------------------------------------------ consensus_9461#2 ------------------------------------------------------------ consensus_9461#0 GCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTCTCCTCGCGCACTG 420 consensus_9461#1 -----ATCCGTCGTTCCTCCTCGGTGTACTCTCG-TTCGACTTTAGTCGCTAGC-TTTTG 53 consensus_9461#2 --------------AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATC--TCCG 44 * * * * * * consensus_9461#0 GCGCTGCT-TCTCCCGGTCCTGTTTGTCCTTCTCCTTTTTCAACTGACTCTCTAGCTTCG 479 consensus_9461#1 TCCCTCCA-ATAGCTTGGCTAATTGAACCTCCACATCT---AGTTTGGGCTTCGACGCC- 108 consensus_9461#2 CCANNNCACAAGGCCNGACCAAGGGCACCGACA----------TTAAGCCACNCACACAA 94 * * * * * ** * * * * consensus_9461#0 CCTGTTCCCGCTT-TTCCCGGGCCAGTGCCTGCACGTCGGCAAAGTTTGTATTTTTCACC 538 consensus_9461#1 CCGGCCGACTCTT-GGCTGTGGCAAATGTTC-CAC-TTGTCCAGGATTTCGTTGATGAAC 165 consensus_9461#2 GNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCAT-NTANATATNGCGGCANTATANATA 153 ** * * ** ** * * * consensus_9461#0 AGCTTCGGATCGGAACTGGTCGCCCCTTCCTCGTCC--TCTTCGTCTGGTTC----ACTT 592 consensus_9461#1 GGTTCCAGATCTGT-TTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGC----ACCA 220 consensus_9461#2 CACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCT 213 * * * consensus_9461#0 TCAGAGAGCTGACTGTATTGCATAAGTATCTGT-TCCTTGATCCGTCGTTCCTCCTCGGT 651 consensus_9461#1 GCAGCATTTGGGATGACATGGGACAGAAATAGC-CGATGCGTTAGTTGTTT-TGCTAAAT 278 consensus_9461#2 ACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGAC 273 * * ** * * * * * * consensus_9461#0 GTACTCTCGTTCGAC-TTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGC- 709 consensus_9461#1 TTATACCGAATCA---CACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCT 335 consensus_9461#2 TTTCATAGCTTCAGCCTGTTCCCGCTTTTGC-CNCAGGGCCAGTGCACTGACACGTCAGG 332 * ** **** * * * * consensus_9461#0 --ACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGA-CTCTTGGCTGTGGCAAATG 766 consensus_9461#1 GAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGA-CACCGCGGCATGCAATAAG 394 consensus_9461#2 CAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNG 392 * * * * ** * * * consensus_9461#0 TTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCC 826 consensus_9461#1 TACACTTTGGTCGGGGAATCGCAAACGTAC-----------------AATGATAGCGCCC 437 consensus_9461#2 TCCTATTCGATCATGGCTTCACTTTCAGAGAGCTA------------GACTGTATTGCAT 440 * * * * * * ** * * ** ** consensus_9461#0 AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 885 consensus_9461#1 AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 496 consensus_9461#2 AAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATT--T 498 * * ** ** * * ** * ** * * * * ** * *** * * consensus_9461#0 GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 945 consensus_9461#1 GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 556 consensus_9461#2 AGT--CGCTAGCTTTTGTCACGCTC-CAATAGCTT--GGCTAATTGAACCTCCAGC-ATG 552 ** * * ****** * ** * * * * * ** *** * * consensus_9461#0 CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTA 1004 consensus_9461#1 CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCG--TCGGCAGGATTGCGCTTAACCTA 613 consensus_9461#2 CTAGTT-TGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTG 611 * * * * * *** * * *** * * * * * ** ** * * ** * consensus_9461#0 TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAA 1064 consensus_9461#1 TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCG 673 consensus_9461#2 TC-CAGGAT-TTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC------ 663 * *** * ** * * ** * ** * * *** *** consensus_9461#0 AACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT 1103 consensus_9461#1 G-------------------------------------- 674 consensus_9461#2 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||