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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1103 fasta sequence
[TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT-GT-GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC-TTTTTCTC-CT-CGCG-CA-CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC-CTTTTTCAACTGACTC-TC-TAGCTTCGCCTGTTCCCGC-TTTTCCCGGGCCAGTGCCTGCACGTCGGC-AAAGTTTGTAT-TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT-CC-TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT]
[+] EMBL CNS09P7Z [TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATTAATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTTTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAA ]
[+] EMBL CNS095NS [ ttttatTTTCGTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATT ]
[+] EMBL CNS0947H [ GTGGGCATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGCGCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CA GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTCTCTTTTTCAACTGACTC TC TAGCTTCGCCTGTGCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTGCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGA ]
[+] EMBL CNS09O3S [ CTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTAGTCGGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGCAGCAATC ]
[-] EMBL BM602016 [ GTTAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAGCATCGCACGCGGCGTTGCTT GT GGCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGCG CAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTTCCC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGcgg ]
[+] EMBL CNS08QDB [ AAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAGGAGCAATCGAAAAAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGAAAGGACGCT ]
[-] EMBL BX623425 [ ggAGCAATCGAANCAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGACGCTACCGCCGGCGTTCGCCCTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT CGNG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTNGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCNGCNTTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGNTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCA ]
[-] EMBL CNS095NR [ TCCTTCGCTTCCAGCGACAGGGCGCTACCGACGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCC TTTTTCTC CT TCTG CG CTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TCTTAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCCCCCACACCCAGT]
[-] EMBL CNS09P7Y [ TCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTTCTCTCTACAGG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAA ]
[-] EMBL CNS08QDA [ aTTGCCGGTTTTGCGCTTTTCC TTTTTCTC CT CCCGCCG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTC TC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACG ]
[-] EMBL CNS0947G [ GCTTTTCC TTTTTCTC CT TCAG CG GTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTCTTC TAG TTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTAATTCGTCGTTCCTCTTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGTTTCGACGCGCCGGCCGACTCTTGGCTGTGGCAAAGGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGCTCACACACACCCA ]
[-] EMBL BX620627 [ C CT CGCG TAGCTGGCGCTGCTTCTCCCGGTCCTGTTTGTCCTTCTC CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTG ]
[-] EMBL AL930303 [ CTTTTTCAACTGACTT TC TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTATGTTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CCGTCGTCCTCTTCGTCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTG AAACTTGTGTG ACTTCTGTTCGGCTAACCtcgg ]
[-] EMBL BX625127 [ C TAGCTTCGCCTGTTCCCGC TTTTCCCGGGCCAGTGCCTGCACGTCGGC AAAGTTTGTAT TTTTCACCAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTC G TCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAAAACTTGTGTGAACTTCTGTTCGGC ]
[-] EMBL BX611460 [ CCTGTTCCCGC TTTTCCCGGGCCAGTGCTTGCACGTCGGCAAAAGTTTGTAT TTTTCACAAGCTTCGGATCGGAACTGGTCGCCCCTT CC TCGTCCTCTTCATCTGGTTCACTTTCAGAGAGCTGACTGTATTGCATAAGTATCTGTTCCTTGATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGCACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCAAGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATT ]
consensusID : consensus_9461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence
[ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG]
[-] EMBL BM633376 [ATCCGTCGTTCCTCCTCGGTGTACTCTCGTTCGACTTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGAACCTCCACATCTAGTTTGGGCTTCGACGCCCCGGCCGACTCTTGGCTGTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGCACCAGCAGCATTTGGGATGACATGGGACAGAAATAGCCGATGCGTTAGTTGTTTTGCTAAATTTATACCGAATCACACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCTGAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGACACCGCGGCATGCAATAAGTACACTTTGGTCGGGGAATCGCAAACGTACAATGATAGCGCCCAGGATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCCGGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAGCCAACTGTTGAACTCGTCCACCGCAGCCATTTCGTCGGCAGGATTGCGCTTAACCTATTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCGG]
consensusID : consensus_9461#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 663 fasta sequence
[AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC]
[-] EMBL AL934953 [AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATCTCCGCCANNNCACAAGGCCNGACCAAGGGCACCGACATTAAGCCACNCACACAAGNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCATNTANATATNGCGGCANTATANATACACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCTACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGACTTTCATAGCTTCAGCCTGTTCCCGCTTTTGCCNCAGGGCCAGTGCACTGACACGTCAGGCAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNGTCCTATTCGATCATGGCTTCACTTTCAGAGAGCTAGACTGTATTGCATAAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATTTAGTCGCTAGCTTTTGTCACGCTCCAATAGCTTGGCTAATTGAACCTCCAGCATGCTAGTTTGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTGTCCAGGATTTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9461#0 TGTCTAGGGCTCGATTATATTTTACTTATGGGTAGTTTCTTTTTCGTCTCAAACAATATT 60
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 AATGGTTGCAGTTATATGTTATTTTAATATGTTATTCTACCACTCAACAACTTTCGTGGG 120
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 CATTTGCTTCAAATGCACCGCTTGGCTATGCGTTTATTTTGTAGGAGGGATTTGTAAAGT 180
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 TAGAGCAATGAGCAGACATTTCGCGCTTCTTGCTGAACATCGCACGCGGCGTTGCTTGTG 240
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 GCTGCCTGCACAGCTAGAAAGCCGCCAGCCGCCAACCAGCCGACCAGTCGACACACGCAG 300
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 CAGCAATCGAAACAATCGGTAGGAATCGGTCTGCCGTTCCTTCGCTTCCAGCGACAGGGC 360
consensus_9461#1 ------------------------------------------------------------
consensus_9461#2 ------------------------------------------------------------
consensus_9461#0 GCTACCGCCGGCGTTCGCCTTTGACGGTTTTGCGCTTTTCCTTTTTCTCCTCGCGCACTG 420
consensus_9461#1 -----ATCCGTCGTTCCTCCTCGGTGTACTCTCG-TTCGACTTTAGTCGCTAGC-TTTTG 53
consensus_9461#2 --------------AAATCCCCGGAGATCNNANAGCGCAANATATACCAGCATC--TCCG 44
* * * * * *
consensus_9461#0 GCGCTGCT-TCTCCCGGTCCTGTTTGTCCTTCTCCTTTTTCAACTGACTCTCTAGCTTCG 479
consensus_9461#1 TCCCTCCA-ATAGCTTGGCTAATTGAACCTCCACATCT---AGTTTGGGCTTCGACGCC- 108
consensus_9461#2 CCANNNCACAAGGCCNGACCAAGGGCACCGACA----------TTAAGCCACNCACACAA 94
* * * * * ** * * * *
consensus_9461#0 CCTGTTCCCGCTT-TTCCCGGGCCAGTGCCTGCACGTCGGCAAAGTTTGTATTTTTCACC 538
consensus_9461#1 CCGGCCGACTCTT-GGCTGTGGCAAATGTTC-CAC-TTGTCCAGGATTTCGTTGATGAAC 165
consensus_9461#2 GNGACNGGTTCTAAGGCNCCNCCNTGTGACGGCAT-NTANATATNGCGGCANTATANATA 153
** * * ** ** * * *
consensus_9461#0 AGCTTCGGATCGGAACTGGTCGCCCCTTCCTCGTCC--TCTTCGTCTGGTTC----ACTT 592
consensus_9461#1 GGTTCCAGATCTGT-TTCCTAATTCGTGCACAGTGAGACATTCGCCAGCAGC----ACCA 220
consensus_9461#2 CACCCTNGTCTNATACNTCCACATTGCGGCCAGGTAAAGACCTAGAGACAGACTTAGCCT 213
* * *
consensus_9461#0 TCAGAGAGCTGACTGTATTGCATAAGTATCTGT-TCCTTGATCCGTCGTTCCTCCTCGGT 651
consensus_9461#1 GCAGCATTTGGGATGACATGGGACAGAAATAGC-CGATGCGTTAGTTGTTT-TGCTAAAT 278
consensus_9461#2 ACTCCATNCACCCGGGCTCCCATAAGAATTGATACCATTCATCCTTGTCTTCAACNTGAC 273
* * ** * * * * * *
consensus_9461#0 GTACTCTCGTTCGAC-TTTAGTCGCTAGCTTTTGTCCCTCCAATAGCTTGGCTAATTGC- 709
consensus_9461#1 TTATACCGAATCA---CACGATCGCTCTGACATGCACACGAGATGGACCGTCCCATTCCT 335
consensus_9461#2 TTTCATAGCTTCAGCCTGTTCCCGCTTTTGC-CNCAGGGCCAGTGCACTGACACGTCAGG 332
* ** **** * * * *
consensus_9461#0 --ACCTCCACGTCTAGTTTGGGCTTCGACGCCCCGGCCGA-CTCTTGGCTGTGGCAAATG 766
consensus_9461#1 GAGGCCACACACTCAGTATACACCCGCTCCCTCCGCACGA-CACCGCGGCATGCAATAAG 394
consensus_9461#2 CAAAGTTTGTATTTATTACACACAGANATTCGGATCAGGAACTGGTCGCCCCTTCCTCNG 392
* * * * ** * * *
consensus_9461#0 TTCCACTTGTCCAGGATTTCGTTGATGAACGGTTCCAGATCTGTTTCAATGATAGCGCCC 826
consensus_9461#1 TACACTTTGGTCGGGGAATCGCAAACGTAC-----------------AATGATAGCGCCC 437
consensus_9461#2 TCCTATTCGATCATGGCTTCACTTTCAGAGAGCTA------------GACTGTATTGCAT 440
* * * * * * ** * * ** **
consensus_9461#0 AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 885
consensus_9461#1 AGG-ATGCCCTCGAGAGCTTCCACCTTTTCCTCGTTGTTCTCGTCCCCTTCCAGGATGCC 496
consensus_9461#2 AAGTATCTGTTCCTTGATACACGTCGTTCCATCCTCGGTGTACTCTCGTTCGACATT--T 498
* * ** ** * * ** * ** * * * * ** * *** * *
consensus_9461#0 GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 945
consensus_9461#1 GGTAATGTAGGAACCGAATACGCTCACGTCCGCCTTCGATGCACGCAGCTTCGAGCTAAG 556
consensus_9461#2 AGT--CGCTAGCTTTTGTCACGCTC-CAATAGCTT--GGCTAATTGAACCTCCAGC-ATG 552
** * * ****** * ** * * * * * ** *** * *
consensus_9461#0 CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCAGTTCGGCAGGATTGCGCTTAACCTA 1004
consensus_9461#1 CCAACTGTTGAACTCGTC-CACCGCAGCCATTTCG--TCGGCAGGATTGCGCTTAACCTA 613
consensus_9461#2 CTAGTT-TGGGCTTCGACGCCCCGGACCGACTCTTGGACTGCTGGCAAATGTTCCACTTG 611
* * * * * *** * * *** * * * * * ** ** * * ** *
consensus_9461#0 TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGAA 1064
consensus_9461#1 TTTCAGAGTGTTTGCTAATTTTCTTTTTTCAATTCAACGTCCTGCAAGATATTTTGTGCG 673
consensus_9461#2 TC-CAGGAT-TTCGTTGATGAACGTTCCAGATCTGTTTNACCTCGGGNCNATTC------ 663
* *** * ** * * ** * ** * * *** ***
consensus_9461#0 AACTTGTGTGAACTTCTGTTCGGCTCACCCACACCCAGT 1103
consensus_9461#1 G-------------------------------------- 674
consensus_9461#2 ---------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||