These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9462#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1807 fasta sequence [CGACCCACGCGTCCGCAAGACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCATTATTAAGCGATCATCAATACTTCACTCGCAGGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTG-CTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCC-CAGCACCTAACCGCACAAG-GCATGGACAATCTGGAGGACAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACC-GGTCGGCAAGCATGCGGAGCCGAAGCTGACCATT-CCGAAGGTGCCGATACATTTCCGCACCCACTGGGACTCGTACTGGATGGAGATGCTGATGCTGGCCGGACTGATGGCTTACTTTGCTAACTATTTGGTCGGCAACAAGAAAAACTCGGCCATCGCCAACCAGTGGCTGTCGCTACACCGCAGCCTGCTGGAAGACAACTTTGCGCTGGTCGGAGACGATGGGAAGAAGGAAACGGAAGGGTCGACCTTTAGCTTTAACAAGGAAAGCGAAAGTGTCTACACGCTGTGGTGCAGTGGCCGCACCTGCTGCGAAGGTATGCTGGTCGAGCTGAAGATGATCAAGCGCCAGGATCTGGTGTCGCTGATCGCTGGCATCATGAAGCCGGTACAGGATCAACTGCATATCAAGGTCGAACTGTCGCCCGACTCGATGGACAACTTTGTGTTATGTGTGGCCAGCCGGAAGCAAGCCACCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAGGCCGATGAGAAGTACAGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGACCAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTT-GGAAGAGATGAAGCCATTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAGGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAAAAAAAGGAGCAGAAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCTTCTTTCTCCAGTGAGATGTTGAAGTAGTGCCGTTTGGGGGTGGATGTTTTAAGCTTCATTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCACATTCCATACACTGTATAGACGAGAGACAGTTGACATCTA] [+] EMBL BM648051 [CGACCCACGCGTCCGCAAGACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCATTATTAAGCGATCATCAATACTTCACTCGCAGGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTG CTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCC CAGCACCTAACCGCACAAG GCATGGACAATCTGGAGGATAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGGTCGGCAAGCATGCGGAGCCGAAGCTGACCATT ] [+] EMBL BM638663 [ ccgAGCTGCTACGGTTTAAATGCATTATTAAGCGATCATCAACACTTCACTCGCAGGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTG CTTCCACTGGCGGTGTTGGCAATGCTTTGCCTAATGCCC CAGCACCTAACCGCACAAG GCATGGACAACCTGGAGGACAATGATTTTGCCGAATTCGAAGACTTTGATGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGTTCGGCTCCGGGAGCCGCCGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGATGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACC GGTCGGCAAGCATGCGGAGCCGAAGCTGACCATTCCCGAAGGTGCCGATACATTTCCGCACCCACTGGGACTCGTACTGGATGGAGATGCT ] [+] EMBL CNS08XHF [ AAGCGATCATCAATACTTCACTCGCAGGTCTATCGCTTTTCTACGACTTGGTGGACCATTTCGCGCCACCATGCGTCTGCTGACTTCCACTGGCGGTGTTGGCAATGCTTTGCCTAATGCCCTCAGCACCTAACCGCACAAGCGCATGGACAATCTGGAGGACAATGATTTTGCCGAATTCGAAG ] [+] EMBL BX627572 [ ACTCGCAGGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTG CTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCC CAGCACCTAACCGCACAAG GCATGGACAACCTGGAGGATAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACC GGTCGGCAAGCATGCGGAGCCGAAGCTGACTATT CCGAAGGTGCCGATACATTTCCGCACGCACTGGGACTCGTACTGGATGGAGATGCTGATGCTGGCCGGACTGATGGCTTACTTTGCCAACTATTTGGTCGGCAACAAGAAAAACTCGGNCATCGCCAACCAGTGGCTGTCGCTACACCGCAGCCTGCTGGAANACAACTTTGCNCT ] [+] EMBL CNS090YL [ GCACAAG GCATGGACAATCTGGAGGACAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGTTCGGCTCCGGCAGCCGCCGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGAAGAAGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACC GGTCGGCAAGCATGCGGAGCCGAAGCTGACCATT CCGAA GTGCCGATACATTTCCGCACGCACTGGGACTCGTACTGGATGGAGATGCTGATGCTGGCCGGACTGATGGCTTACTTTGCTAACTATTTGGTCGGCAACAAGAAAAACTCGGCCATCGCCAACCAGTGGCTGTCGCTACACCGCAGCCTGCTGGAAGACAACTTTGCGCTGGT ] [+] EMBL BM624281 [ ccgCC GGTCGGCAAGCATGCGGAGCCGAAGCTGACCATT CCGAAGGTGCCGATACATTTCCGCACCCACTGGGACTCGTACTGGATGGAGATGCTGATGCTGGCCGGACTGATGGCTTACTTTGCTAACTATTTGGTCGGCAACAAGAAAAACTCGGCCATCGCCAACCAGTGGCTGTCGCTACATCGCAGCCTGCTGGAAGACAACTTTGCGCTGGTCGGAGACGATGGGAAGAAGGAAACGGAAGGGTCGACCTTTAGCTTTAACAAGGAAAGCGAAAGTGTCTACACGCTGTGGTGCAGTGGCCGCACCTGCTGCGAAGGTATGCTGGTCGAGCTGAAGATGATCAAGCGCCAGGATCTGGTGTCGCTGATCGCTGGCATCATGAAGCCGGTACAGGATCAACTGCATATCAAGGTCGAACTGTCGCCCGACTCGATGGACAACTTTGTGTTATGTGTGGCCAGCCGGAAGCAAGCCACCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAGGCCGATGAGAAGTACGGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCT ] [+] EMBL BM599148 [ ccGGTCGGTGACGATGGGAAGAAGGAAACGGAAGGGTCGACCTTTAGCTTTAACAAGGAAAGCGAAAGTGTCTACACGCTGTGGTGCAGTGGCCGCACCTGCTGCGAAGGTATGCTGGTCGAGCTGAAGATGATCAAGCGCCAGGATCTGGTGTCGCTGATCGCTGGCATCATGAAGCCGGTACAGGATCAACTGCATATCAAGGTCGAACTGTCGCCCGACTCGATGGACAACTTTGTGTTATGTGTGGCCAGCCGGAAGCAAGCCACCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAGGCCGATGAGAAGTACAGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGACCAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTTGGGAAGAGATGAAGC ] [+] EMBL BM604717 [ ccgGCTGAAGATGATCAAGCGCCAGGATCTGGTGTCGCTGATCGCTGGCATCATGAAGCCGGTACAGGATCAACTGCATATCAAGGTCGAACTGTCGCCCGACTCGATGGACAACTTTGTGTTATGTGTGGCCAGCCGGAAGCAAGCCACCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAGGCCGATGAGAAGTACAGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGACCAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTT GGAAGAGATGAAGCCATTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAGGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAAAAAAAGGAGCA ] [-] EMBL CNS090YM [ GATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTT GGAAGAGATGAAGCCATTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCCGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAGGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAGAAAAAGGAGCAGAAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCTTCTTTCTCCAGTGAGATGTTGAAGTAGTGCCGTTTGGGGGTGGATGTTTTAAGCTTCATTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCACATTCCATACACTGTATAGACGAGAGACAGTTGACATCTA] consensusID : consensus_9462#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 937 fasta sequence [CAAGAATCCCCGAGGTTAATTAGAGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAAGACTGAAAAGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGNTGCTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATG-CCCAG-A-CTAA-CG-ACAAGGCATGGACAATCTGGGAGGATAATGATTTTTGNCGAATTCNGAAGACTTTGACGATGATGAACTTTTGTAACTGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCTGCCAGCCAAGGGCCAAATCCAAGAGTGCTGGCACAAGACACTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATTGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGTCTGGCAAGCATGCGGAGCCCGAAGCTGACCATATCCCGAANGTGCCGATACATTTCCGCACTGCACTTGGGACTCGTACTGGGATGGACGATGCTGATGCTTGGGCGGACTGATAGCTTTACTTTGCTAACTATNTGGTCGGCAACACAGAAAAACTCGGCCATCGCGCAAACCAGTGGCTGTCGCTACACCGCAGACTGCTGGAAAGACCAACTTTGCGCTGGTCCGGTGACGCTCNGGNAGNAAGGAAACGGANAAGGGTCGACCTTTAGGCTTTAACCAATGGGAAAGCGACAAAGTGTCTACANCGCTCGTGGTAGCAGTGGCGACTGCTGCNAANGGTATAGCAGGTCNAGCTGCAGATGATCCAAGCGNCCAGATCTGGTGT] [+] EMBL AL930338 [CAAGAATCCCCGAGGTTAATTAGAGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAAGACTGAAAAGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGNTGCTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATG CCCAG A CTAA CG ACAAGGCATGGACAATCTGGGAGGATAATGATTTTTGNCGAATTCNGAAGACTTTGACGATGATGAACTTTTGTAACTGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCTGCCAGCCAAGGGCCAAATCCAAGAGTGCTGGCACAAGACACTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATTGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGTCTGGCAAGCATGCGGAGCCCGAAGCTGACCATATCCCGAANGTGCCGATACATTTCCGCACTGCACTTGGGACTCGTACTGGGATGGACGATGCTGATGCTTGGGCGGACTGATAGCTTTACTTTGCTAACTATNTGGTCGGCAACACAGAAAAACTCGGCCATCGCGCAAACCAGTGGCTGTCGCTACACCGCAGACTGCTGGAAAGACCAACTTTGCGCTGGTCCGGTGACGCTCNGGNAGNAAGGAAACGGANAAGGGTCGACCTTTAGGCTTTAACCAATGGGAAAGCGACAAAGTGTCTACANCGCTCGTGGTAGCAGTGGCGACTGCTGCNAANGGTATAGCAGGTCNAGCTGCAGATGATCCAAGCGNCCAGATCTGGTGT] [+] EMBL BM646414 [ ccgCACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAAGACTGAAAAGTCTATCGCTTTTCTACGACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTGCTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCCCAGCACCTAACCGCACAAGGCATGGACAATCT GGAGGATAATGA TTTTGCCGAATTC GAAGACTTTGACGATGATGAA TTTGTAA TGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCC GGGAGCCGCTGACAGTCGTCAAGGAAGCGAACC GCCAGCCAAGGGCC AATCCAAGAGTGC GGCACAAGACAGTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGA TGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGTC GGCAAGCATGCGGA ] consensusID : consensus_9462#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 880 fasta sequence [CCGCCCACGCGTCCGCCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAAGCCGATGAGAAGTACGGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGACCAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTTGGAAGAGATGAAGCCATTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAAGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAGAAAAAGGAGCAGAAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCAGTGAGATGCTGAAGTAGTGCCGTTTGGGGATGGATGTTTTAAGCTTCATTTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCAAATTCCATAAACTGTATAGACGAAAGACAGTTGACATCAACAGCGTCTTCAGAAATCAGGCCAAAAGTAGAGACTTGTGGTGGTAGAGCACGTAGTAATAAATAAACGAAAACACATGAAAAACTGTC] [+] EMBL BM635392 [CCGCCCACGCGTCCGCCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAAGCCGATGAGAAGTACGGTATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGACCAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTTGGAAGAGATGAAGCCATTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAAGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAGAAAAAGGAGCAGAAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCAGTGAGATGCTGAAGTAGTGCCGTTTGGGGgat ] [+] EMBL BM605006 [ ccgCTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAAGCCGAGAAGGAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAGAAAAAGGAGCAGAAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCAGTGAGATGCTGAAGTAGTGCCGTTTGGGGATGGATGTTTTAAGCTTCATTTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCAAATTCCATAAACTGTATAGACGAAAGACAGTTGACATCAACAGCGTCTTCAGAAATCAGGCCAAAAGTAGAGACTTGTGGTGGTAGAGCACGTAGTAATAAATAAACGAAAACACATGAAAAACTGTC] [+] EMBL BM597482 [ ccgGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAAGCCCAGTGAGATGCTGAAGTAGTGCCGTTTGGGGATGGATGTTTTAAGCTTCATTTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCAAATTCCATAAACTGTATAGACGAAAGACAGTTGACATCAACAGCGTCTTCAGAAATCAGGCCAAAAGTAGAGACTTGTGGTGGTAGAGCACGTAGT ] [+] EMBL BM608844 [ ccgGAAAGACAGTTGACATCAACAGCGTCTTCAGAAATCAGGCCAAAAGTAGAGACTTGTGGTGGTAGAGCACGTAGTAATAAATAAACGAAAACACGTGAAAAACAGTC] consensusID : consensus_9462#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [CCGGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAAGACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCTTTATTAAGCGATCATCAATACTTCACTCGCAGGTCTATCGCTTTTCTACGGCTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTGCTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCCCAGCACCTAACCGCACAAGGCATGGACAATCTGGAGGATAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACACTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGTCGGCAAGCATGCGGAGCCGAAGCTGACCATTCCGAAGGTGCCGATACATTTCCGCACGCACTGGGACTCGTACTGGATGGAGATGCTG] [+] EMBL BM593557 [CCGGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAAGACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCTTTATTAAGCGATCATCAATACTTCACTCGCAGGTCTATCGCTTTTCTACGGCTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTGCTTCCACTGGCGGTGTTGGCAATGCTCTGCCTAATGCCCCAGCACCTAACCGCACAAGGCATGGACAATCTGGAGGATAATGATTTTGCCGAATTCGAAGACTTTGACGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGGTCGGCTCCGGGAGCCGCTGACAGTCGTCAAGGAAGCGAACCGCCAGCCAAGGGCCAATCCAAGAGTGCGGCACAAGACACTGAAGACTTCATGGAGATTGATGACGATCAGGTAGACGATGACGGTATCGTGGAGGATGAGGACAGCGAGTTTGAGCATTTCCAGGACGAGGAAGAGTTCGAGGGTTTCGCCAATACGATCGGTGACCAAGACGAGGTGCGACAGGGCGAACCGGTCGGCAAGCATGCGGAGCCGAAGCTGACCATTCCGAAGGTGCCGATACATTTCCGCACGCACTGGGACTCGTACTGGATGGAGATGCTG] consensusID : consensus_9462#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 423 fasta sequence [CCGCCCACGCGTCCGATAGAAACAATACTGATAAGTCTATCGCTTTTCTACCACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTGCTTCCACTGGCGGTGTTGGCAATGCTTTGCCTAATGCCCCAGCACCTAACCGCACAAGGGATGGACAACCTGTAGGACAATGATTTTGCCTAATTCGAAGACTTTGATGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGTTCCGCTCCGGGAGCCGCCGACAGTCGTCCAGGAAGCGAACCGCCATCCAAGGGCCAATCCAAGAGTGCGGCACAATACAGGGAAAACTTCATGGAGATTGATGACGATCACGTAAATGATGACGGTATCGTGGAGGATGAGGACAGCTAGTTTGAGCATTTCCAGGACGAGG] [+] EMBL BM602524 [CCGCCCACGCGTCCGATAGAAACAATACTGATAAGTCTATCGCTTTTCTACCACTTGGTGGACCATCTCGCGCCACCATGCGTCTGCTGCTTCCACTGGCGGTGTTGGCAATGCTTTGCCTAATGCCCCAGCACCTAACCGCACAAGGGATGGACAACCTGTAGGACAATGATTTTGCCTAATTCGAAGACTTTGATGATGATGAATTTGTAATGGGAGAAACAAACCAGGCTGGTCAGCAGTCTGCCGGTTCCGCTCCGGGAGCCGCCGACAGTCGTCCAGGAAGCGAACCGCCATCCAAGGGCCAATCCAAGAGTGCGGCACAATACAGGGAAAACTTCATGGAGATTGATGACGATCACGTAAATGATGACGGTATCGTGGAGGATGAGGACAGCTAGTTTGAGCATTTCCAGGACGAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9462#1 -----------------------------------------------CAAGAATCCCCGA 13 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 CCGGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTATAGAAACAA 60 consensus_9462#0 ------------------------------------------CGACCCACGCGTCCGCAA 18 consensus_9462#2 -------CCGCCCACGCGTCCGCCAAAATGTTCAAAGAGCTCAACGATTTGAACAAATTC 53 consensus_9462#1 GGTTAATTAGAGCAATTGGGACACAGAAATCCGGAATCGATTAGGCAGTCATTAAATTAT 73 consensus_9462#4 ------------------------------------CCGCCCACGCGTCCG-------AT 17 consensus_9462#3 GACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCTTTATTAAGCGATCAT 120 consensus_9462#0 GACTGAAAAGTAAGTAAAGAGCGTAGCTGCTACGGTTTAAATGCATTATTAAGCGATCAT 78 consensus_9462#2 TGTTGTCTAGTCAGCAAAGCCGATGAGAAGTACGGTATTCCCGGGTTTGCATT--GTTAT 111 ** consensus_9462#1 AGAAACAAGACTGAAAAGTCTATCGCTTTTCTA--CGACTTGGTGG-ACCATCTCGCGCC 130 consensus_9462#4 AGAAACAATACTGATAAGTCTATCGCTTTTCTA--CCACTTGGTGG-ACCATCTCGCGCC 74 consensus_9462#3 CAATACTTCACTCGCAGGTCTATCGCTTTTCTA--CGGCTTGGTGG-ACCATCTCGCGCC 177 consensus_9462#0 CAATACTTCACTCGCAGGTCTATCGCTTTTCTA--CGACTTGGTGG-ACCATCTCGCGCC 135 consensus_9462#2 CGGAG-ATTGCCGAGGTGTCGGCCAGTATATTAGATGGTAGGGTAGTAGCAGCTTTAAAT 170 * *** * * * ** *** * * ** ** consensus_9462#1 AC---CATGCGTCTG-NTGCTTCCACTGGCGGTGTTGG--CAATGCTCTG-CCTAATGCC 183 consensus_9462#4 AC---CATGCGTCTG-CTGCTTCCACTGGCGGTGTTGG--CAATGCTTTG-CCTAATGCC 127 consensus_9462#3 AC---CATGCGTCTG-CTGCTTCCACTGGCGGTGTTGG--CAATGCTCTG-CCTAATGCC 230 consensus_9462#0 AC---CATGCGTCTG-CTGCTTCCACTGGCGGTGTTGG--CAATGCTCTG-CCTAATGCC 188 consensus_9462#2 AAGTACTCGCACCTGATTGACTACATTCACC-TGTCGGACCAGTACAGTGGTCCGATACA 229 * * ** *** ** * ** * * *** ** ** * * ** * ** * consensus_9462#1 CAGA---CTAACG--ACAAGGCATGGACAATCTGGGAGGATAATGATTTTTGNCGAATTC 238 consensus_9462#4 CCAGCACCTAACCGCACAAGGGATGGACAACCTGT-AGGACAATGATTTT-GCCTAATTC 185 consensus_9462#3 CCAGCACCTAACCGCACAAGGCATGGACAATCTGG-AGGATAATGATTTT-GCCGAATTC 288 consensus_9462#0 CCAGCACCTAACCGCACAAGGCATGGACAATCTGG-AGGACAATGATTTT-GCCGAATTC 246 consensus_9462#2 GCAAGA-AGATCCGAACCAGT--TGAAGCGTCCGGAGGTGAAGCGCATTTTGCACTGCGG 286 * * ** ** ** * * * * * * *** * consensus_9462#1 NGAAGACTTTGACGATGATGAACTTTTGTAACTGGGAGAAACAAACCAGGCTGGTCAGCA 298 consensus_9462#4 G-AAGACTTTGATGATGATGAA--TTTGTAA-TGGGAGAAACAAACCAGGCTGGTCAGCA 241 consensus_9462#3 G-AAGACTTTGACGATGATGAA--TTTGTAA-TGGGAGAAACAAACCAGGCTGGTCAGCA 344 consensus_9462#0 G-AAGACTTTGACGATGATGAA--TTTGTAA-TGGGAGAAACAAACCAGGCTGGTCAGCA 302 consensus_9462#2 GTTCAATGTTCCCGTGAAGGGAGATTTGGAA-GAGATGAAGCCATTGCTAATACTC-GTG 344 * ** * * * * **** ** * *** * * * ** * consensus_9462#1 GTCTGCCGGGTCGGCTCCGGGGAGCCGCTGACAGTCGTC-AAGGAAGCGAA--CCT-GCC 354 consensus_9462#4 GTCTGCCGGTTCCGCTCCGGG-AGCCGCCGACAGTCGTC-CAGGAAGCGAA--CC--GCC 295 consensus_9462#3 GTCTGCCGGGTCGGCTCCGGG-AGCCGCTGACAGTCGTC-AAGGAAGCGAA--CC--GCC 398 consensus_9462#0 GTCTGCCGGGTCGGCTCCGGG-AGCCGCTGACAGTCGTC-AAGGAAGCGAA--CC--GCC 356 consensus_9462#2 TTTTACTTGATGGATCGTGTG-CGCCGCTACAAGCTGTCCAAGGAGGCAAAGGCCAAGTC 403 * * * * * * * ***** ** *** **** ** ** ** * * consensus_9462#1 AGCCAAGGGCCAAATCCAAGAGTGCTGGCACAAGACACTGAAGACTTCATGGAGATTGAT 414 consensus_9462#4 ATCCAAGGGCCAA-TCCAAGAGTGC-GGCACAATACAGGGAAAACTTCATGGAGATTGAT 353 consensus_9462#3 AGCCAAGGGCCAA-TCCAAGAGTGC-GGCACAAGACACTGAAGACTTCATGGAGATTGAT 456 consensus_9462#0 AGCCAAGGGCCAA-TCCAAGAGTGC-GGCACAAGACAGTGAAGACTTCATGGAGATTGAT 414 consensus_9462#2 TGATAAGAACCG--TGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACCCATCAGGCTCGG 461 *** ** * * *** ** * * * * * * ** * consensus_9462#1 GACGATCAGGTAGACGATGACGGTATCGTGGAGGATTGAGGACAGC-GAGTTTGAGCATT 473 consensus_9462#4 GACGATCACGTAAATGATGACGGTATCGTGGAGGAT-GAGGACAGC-TAGTTTGAGCATT 411 consensus_9462#3 GACGATCAGGTAGACGATGACGGTATCGTGGAGGAT-GAGGACAGC-GAGTTTGAGCATT 514 consensus_9462#0 GACGATCAGGTAGACGATGACGGTATCGTGGAGGAT-GAGGACAGC-GAGTTTGAGCATT 472 consensus_9462#2 GCCGAGGCGGCAGC-----ACTGCGCCGCGAAGAGAAGCGTAAAGCCGAGAAGGAGAAAA 516 * *** * * ** * ** * ** * * * *** ** *** * consensus_9462#1 TCCAGGACGAGGAAGAGTTCGAGG----GTTTCGCCAATACGATCGGTGACCAAGACGAG 529 consensus_9462#4 TCCAGGACGAGG------------------------------------------------ 423 consensus_9462#3 TCCAGGACGAGGAAGAGTTCGAGG----GTTTCGCCAATACGATCGGTGACCAAGACGAG 570 consensus_9462#0 TCCAGGACGAGGAAGAGTTCGAGG----GTTTCGCCAATACGATCGGTGACCAAGACGAG 528 consensus_9462#2 TCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAGAAAAAGGAGCAGAAACGTC 576 *** * *** * consensus_9462#1 GTGCGACAGGGCGAACCGGTCTGGC-AAGCATGCGGAGCCCGAAGCTGACCATATCCCGA 588 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 GTGCGACAGGGCGAACCGGTC-GGC-AAGCATGCGGAGCC-GAAGCTGACCAT--TCCGA 625 consensus_9462#0 GTGCGACAGGGCGAACCGGTC-GGC-AAGCATGCGGAGCC-GAAGCTGACCAT--TCCGA 583 consensus_9462#2 AGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAAATGTAAA 636 consensus_9462#1 ANGTGCCGATACATTTCCGCACTGCACTTGGGACTCGTAC---TGGGATGGACGATGCTG 645 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 AGGTGCCGATACATTTCCGCAC-GCACT-GGGACTCGTAC---TGGA--TGGAGATGCTG 678 consensus_9462#0 AGGTGCCGATACATTTCCGCAC-CCACT-GGGACTCGTAC---TGGA--TGGAGATGCTG 636 consensus_9462#2 GCCCAGTGAGATGCTGAAGTAGTGCCGTTTGGGGATGGATGTTTTAAGCTTCATTTTTTT 696 consensus_9462#1 ATGCTTGGGCGGACTGATAGCTTTACTTTGCTAACTATNTGGTCGGCAACACAGAAAAAC 705 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 ATGCT-GGCCGGACTGATGGCTT-ACTTTGCTAACTATTTGGTCGGCAACA-AGAAAAAC 693 consensus_9462#2 TTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCAGTTGGTAAATCAAATT 756 consensus_9462#1 TCGGCCATCGCGCAAACCAGTGGCTGTCGCTACACCGCAGACTGCTGGAAAGACCAACTT 765 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 TCGGCCATCGC--CAACCAGTGGCTGTCGCTACACCGCAGCCTGCTGGAAGA--CAACTT 749 consensus_9462#2 CCATAAACTGTATAGACGAAAGACAGTTGACATCAACAGCGTCTTCAGAAATCAGGCCAA 816 consensus_9462#1 TGCGCTGGTCCGGTGACGCTCNGGNAGNAAGGAAACGGANAAGGGTCGACCTTTAGGCTT 825 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 TGCGCTGGTC---GGAGACGATGGGAAGAAGGAAACGGAA--GGGTCGACCTTTAGCTTT 804 consensus_9462#2 AAGTAGAGACTTGTGGTGGTAGAGCACGTAGTAATAAATAAACGAAAACACATGAAAAAC 876 consensus_9462#1 TAACCAATGGGAAAGCGACAAAGTGTCTACANCGCTCGTGGTAGCAGTGGCGACTGCTGC 885 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 AAC------AAGGAAAGCGAAAGTGTCTACACGCTGTGGTGCAGTGGCCGCACCTGCTGC 858 consensus_9462#2 TGTC-------------------------------------------------------- 880 consensus_9462#1 NAANGGTATAGCAGGTCNAGCTGCAGATGATCCAAGCGNCCAGATCTGGTGT-------- 937 consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 GAAGGTA--TGCTGGTCGAGCTGAAGATGATC-AAGCGCCAGGATCTGGTGTCGCTGATC 915 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 GCTGGCATCATGAAGCCGGTACAGGATCAACTGCATATCAAGGTCGAACTGTCGCCCGAC 975 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 TCGATGGACAACTTTGTGTTATGTGTGGCCAGCCGGAAGCAAGCCACCAAAATGTTCAAA 1035 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 GAGCTCAACGATTTGAACAAATTCTGTTGTCTAGTCAGCAAGGCCGATGAGAAGTACAGT 1095 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 ATTCCCGGGTTTGCATTGTTATCGGAGATTGCCGAGGTGTCGGCCAGTATATTAGATGGT 1155 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 AGGGTAGTAGCAGCTTTAAATAAGTACTCGCACCTGATTGACTACATTCACCTGTCGGAC 1215 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 CAGTACAGTGGTCCGATACAGCAAGAAGATCCGAACCAGTTGAAGCGTCCGGAGGTGAAG 1275 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 CGCATTTTGCACTGCGGGTTCAATGTTCCCGTGAAGGGAGATTTGGAAGAGATGAAGCCA 1335 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 TTGCTAATACTCGTGTTTTACTTGATGGATCGTGTGCGCCGCTACAAGCTGTCCAAGGAG 1395 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 GCAAAGGCCAAGTCTGATAAGAACCGTGCTGCGGTGGAGGAAGAGTTTATGAAGAGCACC 1455 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 CATCAGGCTCGGGCCGAGGCGGCAGCACTGCGCCGCGAAGAGAAGCGTAAGGCCGAGAAG 1515 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 GAGAAAATCCTTGCCGAAGAGGACCCGGAAAAGCAGCGACGCTGGGAAAAAAAGGAGCAG 1575 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 AAACGTCAGCTCAAAAAGCAAGCCCCCAAGATGAAGCAGCTTTCGATTAAGGCACTTTAA 1635 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 ATGTAAAGCCCTTCTTTCTCCAGTGAGATGTTGAAGTAGTGCCGTTTGGGGGTGGATGTT 1695 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ------------------------------------------------------------ consensus_9462#4 ------------------------------------------------------------ consensus_9462#3 ------------------------------------------------------------ consensus_9462#0 TTAAGCTTCATTTTTTTTGTTGGTGTGTTACTCTTTGCTAGAGTCGGTAGAACAAATGCA 1755 consensus_9462#2 ------------------------------------------------------------ consensus_9462#1 ---------------------------------------------------- consensus_9462#4 ---------------------------------------------------- consensus_9462#3 ---------------------------------------------------- consensus_9462#0 GTTGGTAAATCACATTCCATACACTGTATAGACGAGAGACAGTTGACATCTA 1807 consensus_9462#2 ---------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||