These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9468#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 2514 fasta sequence [CCGACGAAATCGAATCGACCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGAGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAAAACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGACATTGAAAATACCCATCCAGAGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT-CCCG-TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACT-TTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAA-CAAC-AGCTCCATCAGATACGATCCTACACACAGC-AGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGGAACGT-CACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACC-GCCCTGAACGCGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGA-GCGGGGCTGCGATGGCGAT-CAACAAACCGCCCGGCTCGCACCACTCGAGCATGGGCT-CGAACTACAACAACACCTCGAAC-AGTGGCGGCGGGTCGTCGATGTTTGAGGATAACTTCATTACCGGGTCCCGGGGACAGACGCAGGAGCAGATGCAGGAAGAAATCGATCTGCAAGCGCTGGAAGACCAGGAACGGACCATCCGCGAGCTGGAGGAGAATATTGTTAGTGTTAATGAAATTTACAAGAAGCTCGGTGCACTCGTGTACGAACAGAGCCACCAGGTGGACTCGATCGAAGCGTCCGTCGAGCAGACGAGCGTGTTCGTATCGGAAGGTGTACAGCAGCTTAAACAGGCCAGCCATTATCAGAACAAAGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAGCCGCAATATTAGCATTCAT-CATTCTCATCATCGTTCTGAAGCACTAATGCGCTGCAGTAAAAAGAAAAAATAAGGAAATGTAAGTTGAAACGGCGAGAGAATCTATGTTATATAAATACCTAGAACAGAAATGTTTACACCGGACCGGAAGGAAAACATGAATCGATACGAAGGACGTCACACAATCCTTAGCCAGTAGAAGAAGAGTGCAATGTGCAATGCGTTTACGCGTTTGTGTTTAAATTATTTAAATTATCTTTTGTGCTTTACAAAGCCACGTGGTAGATCCATTGTGCATCCATTGGCAGTAGCACACACGCACCTAGCACTGGTTGCCGGTTAGCTCCCACTGATTTGTGTACGACTAGCATCCGTAATAGAATCTTGGTTAGAGAGGCGCAATCCATCCACACACAACAACAACAAAAAATGCATTCCATTTGACGGATAGGGCAAGGGTACGAGTTGGATTACATTGTGAATCAGGCTGATAATTCAAATACCAACAATAAGATACACAGTGAATGTGAACGTGGCTTACAAACACACGCTGGCCGCGAATTAATGATAATGATATTATGCTCTGGTTCTCTCTCTATGATGTGCGAGAACTTTCCGTTGTATTGGATGCTTTATTTGAAATATATATATATATATATATATAGTCGTACTGTATTTAGTTTAGTTTGCTGCCTGCTATTATAACACTTAAATCCGCCGCTGTTACTCTTCGGCCAGCCGGCATCAAACCGCGATCCATTGACTACTGCTACTACTGTTCTAGGCAGATGTATTTTAGTAGTATTACACCGTGTATTTCGTAGTTTTGGGAGTTTTAATTAGCCTTTTTTAATCACACACTAAAAAAAATGATAGAATTTGGAGAAATGGCGAATAGAAAAAGGAAGGAAGAATGAATACAAACTACGTTAAAGTGAAATCGTTTCC-TATCCATCCTATACTCCTA-CCCATGCTGACGGGCGAGAGAATACATTGAGCAATGTGAACGATTATTTAGCCCACAAGTTGAAAGTAACGTACATTTTTCGACTGTGATACCATTCGATTGAAGAACGGAGCAAGAAGACGGGGTACGTTAACCGAAAAGAAACGTATGTAAGAAACCGACAGCATATAGGAACATAAAATCCAAAGCAAATAGCAGATACCAGGCGTGTGCGGGACGAGTATGTCTCTTTTGTTTCTTTCAG] [+] EMBL BM653820 [CCGACGAAATCGAATCGACCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT CCCG TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACT TTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAA CAAC AGCTCCATCAGA ] [+] EMBL CNS08XXZ [ gAATCTAATCGACCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGAGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAAAACCAGCTGTAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGACATTGGAAACACCCATCCAGAGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT CCCG TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACT TTCAGAAAACGGCCCAAATTGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGTATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAA CAAC AGCTCCATCAGATACGATCCTACACACAGC AGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGGAACGT CACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACC GCCCTGAACGCGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGA GCGGGGCTGCGATGGCGAT CAACAAACCGCCCGGCTCGCACCACTCGAGCATGGGCT CGAACTACAACAACACCTCGAAC AGTGGCGGCGGGTCGTCGATGTTTGAGGATAACTTCATTACCGGGTCCCGGGG ] [+] EMBL BM580762 [ ccGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGAGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAAAACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGACATTGGAAACACCCATCCAGAGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCCG TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACCACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCAC ] [+] EMBL BM602647 [ ccgATGAAAGTTGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTACTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGAGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT CCCG TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACT TTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGCATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAA CAAC AGCTCCATCAGATACGGTCCTACACACAGC AGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGGAACGT CACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACC GCCCTGAACGCGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGA GCGGGGCCGCGATGGCGAT CAACAAACCGCCCGGCTCGCACCAC ] [+] EMBL AL933381 [ gAATCCCCCGAGGTT AAAATA CCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT CCCGCTCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTATTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACCAGTTCGGCACGG ACAGGATTCGCCCGAGCTTAAATCAACTAGCTCCATCAGATACGATCCTACACACAGCTAGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGGAGCGTACACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACCGGCCCTGAACGCG TCCAATCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGACGC GGGC GCGATGGCGATACAACAAACCG CCGG TCGCACCACTCNAGCATGGGCTCCGAACTACAACAACACCTCGAAC A ] [-] EMBL CNS08XY0 [ TCGCCAGACATTGGAAACACCCATCCAGAGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAAT CCCG TCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACT TTCAGAAAACGGCCCAAATTGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGTATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAA CAAC AGCTCCATCAGATACGATCCTACACACAGC AGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGGAACGT CACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACC GCCCTGAACGCGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGA GCGGGGCTGCGATGGCGAT CAACAAACCGCCCGGCTCGCACCACTCGAGCATGGGCT CGAACTACAACAACACCTCGAACAAGTGGCGGCGGGTCGTCGATGTTTGAGGATAACTTCATTACCGGGTCCCGGGGACAGACGCAGGAGCAGATGCAGGAAGAAATCGATCTGCAAGCGCTGGAAGACCAGGAACGGACCATCCGCGAGCTGGAGGAGAATATTGTTAGTGTAAATGAAATTTACAAGAAGCTCGGTGCACTCGTGTACGAACAGAGCCACCAGGTGGACTCGATCGAAGCGTCCGTCGAGCAGACGAGCGTGTTCGTATCGGAAGGTGTACAGCAGCTTAAACAGGCCAGCCATTATCAGAACAAAGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAGCCGCAATATTAGCATTCATGCATTCTCATCATCGTTCTGAAGCACTAATCAACAGCAGTAAAAAGAAccaaa ] [+] EMBL BM643705 [ ccgGGCTGGTGGACGAGTTTTCCACC GCCCTGAACGCGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGCGGCAGGCGA GCGGGGCCGCGATGGCGAT CAACAAACCGCCCGGCTCGCACCACTCGAGCATGGGCT CGAACTACAACAACACCTCGAAC AGTGGCGGCGGTTCGTCGATGTTTGAGGATAACTTCATTACCGGGTCCCGGGGACAGACGCAGGAGCAGATGCAGGAAGAAATCGATCTGCAAGCGCTGGAAGACCAGGAACGGACCATCCGCGAGCTGGAGGAGAATATTGTTAGTGTTAATGAAATTTACAAGAAGCTCGGTGCACTCGTGTACGAACAGAGCCACCAGGTGGACTCGATCGAAGCGTCCGTCGAGCAGACGAGCGTGTTCGTATCGGAAGGTGTACAGCAGCTTAAACAGGCCAGCCATTATCAGAACAAAGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAGCCGCAATATTAGCATTCAT CATTCTCATCATCGTTCTGAAGCACTAATGCGCTGCAGTAAAAAGAAAAAATAAGG ] [-] EMBL AGA281186 [ ACCTCGAAC AGTGGCGGCGGTTCGTCGATGTTTGAGGATAACTTCATTACCGGGTCCCGGGGACAGACGCAGGAGCAGATGCAGGAAGAAATCGATCTGCAAGCGCTGGAAGACCAGGAACGGACCATCCGCGAGCTGGAGGAGAATATTGTTAGTGTTAATGAAATTTACAAGAAGCTCGGTGCACTCGTGTACGAACAGAGCCACCAGGTGGACTCGATCGAAGCGTCCGTCGAGCAGACGAGCGTGTTCGTATCGGAAGGTGTACAGCAGCTTAAACAGGCCAGCCATTATCAGAACAAAGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAGCCGCAATATTAGCATTCAT CATTCTCATCATCGTTCTGAAGCACTAATGCGCTGCAGTAAAAAGAA ] [+] EMBL BM579872 [ ccgGACCCACGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAGCCGCAATATTATCATTCAT CATTCTCATCATCGTTCTGAAGCACTAATGCGCTGCAGTAAAAAGAAAAAATAAGGAAATGTAAGTTGAAACGGCGAGAGAATCTATGTTATATAAATACCTAGAACAGAAATGTTTACACCGGACCGGAAGGAAAACATGAATCGATACGAAGGACGTCACACAATCCTTAGCCAGTAGAAGAAGAGTGCAATGTGCAATGCGTTTACGCGTTTGTGTTTAAATTATTTAAATTATCTTTTGTGCTTTACAAAGCCACGTGGTAGATCCATTGTGCATCCATTGGCAGTAGCACACACGCACCTAGCACTGGTTGCCGGTTAGCTCCCACTGATTTGTGTACGACTAGCATCCGTAATAGAATCTTGGTTAGAGAGGCGCAATCCATCCACACACAACAA ] [+] EMBL BX618425 [ ACAAAGCCACGTGGTAGATCCCTTTTGCATCCATTGGCAGTAGCACACACGCACCTAGCACTGGTTGCCGGTTAGCTCCCACTGATTTGTGTACGACTAGCATCCGTAATAGAATCTTGGTTAGAGAGGCGCAATCCATCCACACACAACAACAACAAAAAATGCATTCCATTTGACGGATAGGGCAAGGGTACGAGTTGGATTACATTGTGAATCAGGCTGATAATTCAAATACCAACAATAAGATACACAGTGAATGTGAACGTGGCTTACAAACACACGCTGGCCGCGAATTAATGATAATGATATTATGCTCTGGTTCTCTCTCTATGATGTGCGAGAACTTTCCGTTGTATTGGATGCTTTATTTGAAATATATATATATATATATATATAGTCGTACTGTATTTAGTTTAGTTTGCTGCCTGCTATTATAACACTTAAATCCGCCGCTGTTACTCTTCGGCCAGCCGGCATCAAACCGCGATCCATTGACTACTGCTACTACTGTTCTAGGCAGATGTATTTTAGTAGTATTACACCGTGTATTTCGTAGTTTTGGGAGTTTTAATTAGCCTTTTTTAATCACACACTAAAAAAAATGATAGAATTTGGAGAAATGGCGAATAGAAAAAGGAAGGAAGAATGAATACAAACTACGTTAAAGTGAAATCGTTTCC TATCCATCCTATACTCCTA CCCATGCTGACGGGCGAGAGAATACATTGAGCAATGTGAACGATTATTTAGCCCACAAGTTGAAAGTAACGTACATTTTTCGACTGTGATACCATTCGATTGAAGAACGGAGCAAGAAGACGGGGTACGTTAACCGAAAAGAAACGTATGTAAGAAACCGACAGCATATAGGAACATAAAATCCAAAGCAAATAGCAGATACCAGGCGTGTGCGGGACGAGT ] [+] EMBL CNS09963 [ CAACAATAAGATACACGGTGAATGTGAACGTGGCTTACAAACACACGCTGGCCGCGAATTAATGATAATGATATTATGCTCTGGTTCTCTCTCTATGATGTGCGAGAACTTTCCGTT ] [-] EMBL CNS09964 [ GAAGAATGAATACAAAATTCGTTAAAGTAAAATCGTTTCCATATCCATCCTATACTCCTACCCCATGCTGACGGGCGAGAGAATACATTAAGCAATGTGAACGAATATTTAGCCCACAAGTTGAAAGTAACGTACATTTTTCGACTGTGATACCATTCGATTGAAGAACGGAGCAAGAAGACGGGGTACGTTAACCGAAAAGAAACGTATGTAAGAAACCGACATCATATAAGAACATAAAATCCAAAGCAAATAGCAGATACCAGGCGTGTGCGGGACGAGTATGTCTCTTTTGTTTCTTTCAG] consensusID : consensus_9468#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 668 fasta sequence [CCGCCCACGCGTCCGGACCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACA-GGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCC] [+] EMBL BM629449 [CCGCCCACGCGTCCGGACCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACA GGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACCAGTTCGGCACGGCACAGGATTCGCCC] [+] EMBL BM642719 [ ccgCCAAAAGTAGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACA GGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATG ] [+] EMBL BM592214 [ ccgGGCGGAAGGAATTTTTGTGTTGTTATTTCGTCGCAATCGTGAATTTTTCATCCCATAAAGGGTTCGATACGCATAATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGACACCGAAAATAGCAACACAACGACA GGTGGAAAAGATGAGTTACGCTTCATTCGACAATAATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCGTGGTGGCCAGCATCCA ] [+] EMBL AGA282810 [ AATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGTGCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTTGCAATAGACACCGAAAATAGCAACACAACGACAGGGTGGAAAga ] consensusID : consensus_9468#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence [ATCCCGAGTTACCAAAGTAGCGGAAAGGGAAAATTTTTTTTGGGTGTTTGGTTAATTTTCCGTCGCCAATCGTGGAAATTTTTTCAATCCCCCATAAAGGGTTCGATACGCATAATCAGCCACTGATAAGAGAGAAGAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGTGCATGAAAGTTGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTACTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGANATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGC] [+] EMBL AL932789 [ATCCCGAGTTACCAAAGTAGCGGAAAGGGAAAATTTTTTTTGGGTGTTTGGTTAATTTTCCGTCGCCAATCGTGGAAATTTTTTCAATCCCCCATAAAGGGTTCGATACGCATAATCAGCCACTGATAAGAGAGAAGAGCACTCCATAATTGTTTTCCCAAAACGAACAACAAGCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAGAACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGTGCATGAAAGTTGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAATCCAACTTACTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGANATTGCGGGAGCAGATTGTTACCAACTCCCGAAAGCAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9468#0 CCGACGAAATCGAATCGACCCAAAAGTAGGCGGAAGGAATTTTT-----GTGTT--GTTA 53 consensus_9468#1 CCGCCCACG-CGTCCGGACCCAAAAGTAGGCGGAAGGAATTTTT-----GTGTT--GTTA 52 consensus_9468#2 ------ATCCCGAGTTACCAAAGTAGCGGAAAGGGAAAATTTTTTTTGGGTGTTTGGTTA 54 * ** * * ** * * ******* ***** **** consensus_9468#0 ---TTTCGTCGC-AATCGTGAA---TTTTTCA---TCCCATAAAGGGTTCGATACGCATA 103 consensus_9468#1 ---TTTCGTCGC-AATCGTGAA---TTTTTCA---TCCCATAAAGGGTTCGATACGCATA 102 consensus_9468#2 ATTTTCCGTCGCCAATCGTGGAAATTTTTTCAATCCCCCATAAAGGGTTCGATACGCATA 114 ** ****** ******* * ******* ************************ consensus_9468#0 ATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAA 163 consensus_9468#1 ATCAGCCAACTGATAAGAGAGAAAAGCACTCCATAATTGTTTTCCCAAAACGAACAACAA 162 consensus_9468#2 ATCAGCCA-CTGATAAGAGAGAAGAGCACTCCATAATTGTTTTCCCAAAACGAACAACAA 173 ******** ************** ************************************ consensus_9468#0 GCAGGAGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAA 223 consensus_9468#1 GCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAG 222 consensus_9468#2 GCAGGGGCATTGTTGACGTTGTGCAAAAGAATAGACCTTCTTCCCGCAGTGGCTCAGCAG 233 ***** ***************************************************** consensus_9468#0 AACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGT 283 consensus_9468#1 AACCAGCTGCAGCTTTCACTTGAGCACAGAACCAACAGAATGACTCAGTGTGTGGTTGGT 282 consensus_9468#2 AACCAGCTGCAGCTTTCACTTGGGCACAGAACCAACAGAATGACTCAGTGTGTGGCTGGT 293 ********************** ******************************** **** consensus_9468#0 GCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAA 343 consensus_9468#1 GCATGAAATTCGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAA 342 consensus_9468#2 GCATGAAAGTTGATCCCAGCAGTGTAGCGACTCGGTGCCAGCATATTTTGCGTTCAACAA 353 ******** * ************************************************* consensus_9468#0 TCCAACTTATTGAGAAGCAATCGCCAGACATTGAAAATACCCATCCAGAGATTGCGGGAG 403 consensus_9468#1 TCCAACTTATTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGTGATTGCGGGAG 402 consensus_9468#2 TCCAACTTACTGAGAAGCAATCGCCAGATATTGAAAATACCCATCCAGANATTGCGGGAG 413 ********* ****************** ******************* ********** consensus_9468#0 CAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGA 463 consensus_9468#1 CAGATTGTTACCAACTCCCGAAAGCAGCTCCCGGAATCCCGTCAACGTTGTAGCAATAGA 462 consensus_9468#2 CAGATTGTTACCAACTCCCGAAAGCAGC-------------------------------- 441 **************************** consensus_9468#0 CACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATA 523 consensus_9468#1 CACCGAAAATAGCAACACAACGACAGGTGGAAAAGATGAGTTACGCTTCATTCGACAATA 522 consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCG 583 consensus_9468#1 ATGCCACGGGCAATTCGAACATCACCAACGAGGCGGACTTTCAGAAAACGGCCCAAATCG 582 consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACC 643 consensus_9468#1 TGGTGGCCAGCATCCAGAAGATCCTGCAAAATGTGTCGTCTATGCAGCGAATGGTCAACC 642 consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AGTTCGGCACGGCACAGGATTCGCCCGAGCTTAAACAACAGCTCCATCAGATACGATCCT 703 consensus_9468#1 AGTTCGGCACGGCACAGGATTCGCCC---------------------------------- 668 consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ACACACAGCAGCTGATAAACGACACGACCAACCAGCTGAACGATCTGGTAAACTGCAAGG 763 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AACGTCACCTAAAGATCCAGCGGGACCGGCTGGTGGACGAGTTTTCCACCGCCCTGAACG 823 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CGTTCCAAGCGGTCCAGCGGAAAACGGTCGATCTGGAGAAGAATGCCGTCCGGCAGGCGC 883 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 GGCAGGCGAGCGGGGCTGCGATGGCGATCAACAAACCGCCCGGCTCGCACCACTCGAGCA 943 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TGGGCTCGAACTACAACAACACCTCGAACAGTGGCGGCGGGTCGTCGATGTTTGAGGATA 1003 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ACTTCATTACCGGGTCCCGGGGACAGACGCAGGAGCAGATGCAGGAAGAAATCGATCTGC 1063 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AAGCGCTGGAAGACCAGGAACGGACCATCCGCGAGCTGGAGGAGAATATTGTTAGTGTTA 1123 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ATGAAATTTACAAGAAGCTCGGTGCACTCGTGTACGAACAGAGCCACCAGGTGGACTCGA 1183 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TCGAAGCGTCCGTCGAGCAGACGAGCGTGTTCGTATCGGAAGGTGTACAGCAGCTTAAAC 1243 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AGGCCAGCCATTATCAGAACAAAGCTCGCAAGAAGAAGCTGATTCTTGCGCTGATAGCAG 1303 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CCGCAATATTAGCATTCATCATTCTCATCATCGTTCTGAAGCACTAATGCGCTGCAGTAA 1363 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AAAGAAAAAATAAGGAAATGTAAGTTGAAACGGCGAGAGAATCTATGTTATATAAATACC 1423 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TAGAACAGAAATGTTTACACCGGACCGGAAGGAAAACATGAATCGATACGAAGGACGTCA 1483 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CACAATCCTTAGCCAGTAGAAGAAGAGTGCAATGTGCAATGCGTTTACGCGTTTGTGTTT 1543 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AAATTATTTAAATTATCTTTTGTGCTTTACAAAGCCACGTGGTAGATCCATTGTGCATCC 1603 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ATTGGCAGTAGCACACACGCACCTAGCACTGGTTGCCGGTTAGCTCCCACTGATTTGTGT 1663 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ACGACTAGCATCCGTAATAGAATCTTGGTTAGAGAGGCGCAATCCATCCACACACAACAA 1723 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CAACAAAAAATGCATTCCATTTGACGGATAGGGCAAGGGTACGAGTTGGATTACATTGTG 1783 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AATCAGGCTGATAATTCAAATACCAACAATAAGATACACAGTGAATGTGAACGTGGCTTA 1843 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CAAACACACGCTGGCCGCGAATTAATGATAATGATATTATGCTCTGGTTCTCTCTCTATG 1903 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ATGTGCGAGAACTTTCCGTTGTATTGGATGCTTTATTTGAAATATATATATATATATATA 1963 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TATAGTCGTACTGTATTTAGTTTAGTTTGCTGCCTGCTATTATAACACTTAAATCCGCCG 2023 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CTGTTACTCTTCGGCCAGCCGGCATCAAACCGCGATCCATTGACTACTGCTACTACTGTT 2083 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CTAGGCAGATGTATTTTAGTAGTATTACACCGTGTATTTCGTAGTTTTGGGAGTTTTAAT 2143 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 TAGCCTTTTTTAATCACACACTAAAAAAAATGATAGAATTTGGAGAAATGGCGAATAGAA 2203 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AAAGGAAGGAAGAATGAATACAAACTACGTTAAAGTGAAATCGTTTCCTATCCATCCTAT 2263 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ACTCCTACCCATGCTGACGGGCGAGAGAATACATTGAGCAATGTGAACGATTATTTAGCC 2323 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 CACAAGTTGAAAGTAACGTACATTTTTCGACTGTGATACCATTCGATTGAAGAACGGAGC 2383 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 AAGAAGACGGGGTACGTTAACCGAAAAGAAACGTATGTAAGAAACCGACAGCATATAGGA 2443 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 ACATAAAATCCAAAGCAAATAGCAGATACCAGGCGTGTGCGGGACGAGTATGTCTCTTTT 2503 consensus_9468#1 ------------------------------------------------------------ consensus_9468#2 ------------------------------------------------------------ consensus_9468#0 GTTTCTTTCAG 2514 consensus_9468#1 ----------- consensus_9468#2 ----------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||