These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9472#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1783 fasta sequence [AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG-GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT-GGTACCGGCGATTCCAGCGGATGCG-TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG-AT-AGGCGGCGCA--CA-T-AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG-ATACCGACATTCCG-GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT-GGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC-CGGAG-CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT-CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA-TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGAAAAAAAA] [+] EMBL CNS092GC [AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA TAAATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACA ] [+] EMBL BM603924 [ ccgAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACA ] [+] EMBL BX602401 [ GACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAAAAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCAAGAATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGT ] [+] EMBL BX620920 [ CGTAGTTGGTCATTTTCATATTTAGTTTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATTTAGATAATCGTCCCACCGAACTTGAGACGCTTGTGTTATCTTTTGCCGTACGAAAAGCGCAATGCGTGGCATATAGAGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTGAACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCACCGGCA AATAGTAATGACGCGCCACGCTTTATCCGTTGTGGTGCCTCAGGTCCTGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACC ] [+] EMBL CNS08VH6 [ TGCGAATATGGCGCCGGCAAGCG GGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATC ] [+] EMBL CNS08IRZ [ TATGGCGCCGGCAAGCGCGGACTACACTTCGTCGTTAGTACGTTCTGCTGGTTCACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACGTACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACTTTTCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTTCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTG CCAC CGGAG CCGCGC ] [+] EMBL CNS09J0H [ ccTGTGTTTTTCG AATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACT GGTACCGGCGATTCCAGCGGATGCG TGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAGCGTGGAAGCG AT AGGCGGCGCA CATT AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGC CAT GGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACA ] [+] EMBL CNS09RRQ [ cctcTTTTTCGAAATTCTAGAACCTTCGGCCTTGGAGTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAAATCTCCGCAAGGGAAACTGGGTACCGGCGATTCCAGCGGATGCGCTGCTCTGCAAAATTCGAAAACGCCGATGAGCTGGAGGGCAACATTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCGCAT AGGCGGCGCA CA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCGCATACCGACATTCCGCGCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGT ] [-] EMBL CNS092GD [ TTGCACTCGTCGAGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGC GCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTC ] [+] EMBL CNS08W2V [ AGCGGGGCCACTGTTCGTTTCTAACCAAAGCCATCAACTTTTTAGCG AT AGGCGGCGCA CA TAAAATGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACATGGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGC ] [-] EMBL CNS08W2W [ TGTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG ATCAGGCGGCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAAAATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAAACTCGTTTATTGAAACAAATTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATA ] [-] EMBL CNS08VH7 [ GTTCGTTTCTAACCAAAGCCATCAACGTGGAAGCG AT AGGC GCGCAGCCA T AATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGATTTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATA ] [-] EMBL CNS08IS0 [ ATTGTGACCGAGTATGATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG ATACCGACATTCCG GCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGCTAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATACAGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGGTAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAGCAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCT AAAAACTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAACACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACATACTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAA ] [-] EMBL CNS09J0I [ GGGAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAAAACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGA ] [-] EMBL CNS09RRR [ GAGTGCTGTAGCACAT GGGATGTTGCAACGAGACTTAACACTCACTCGGTAAAACTTGCACGAAAAGATCTGACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCACGCGGAGCCCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCTTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTGCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGAT ACTTTGTTGTAAAATATt ] [-] EMBL AGA280620 [ GGTAACACTTGCACGAAAAGATTTGACGCAGACTCGTTTAATGAAACCGTTTTGGACCAGCACCGGATTGTGCCCAC CGGAG CCGCGCAATGCAAGTGCAGCTTTTTTGCTATCGCAAGACACGTTGACAAACCTGGAGCTCATTGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTATTGAAGTGTAAGTTACAT CTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAAGGGCTAGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGA TTTCAAGCAGTGTAAGCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGTATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTTTTAATGAAAAAAAA] consensusID : consensus_9472#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 802 fasta sequence [ATCCCCCGCAGGTTATTGGTCATTTTCATATTTAGTCCTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAACTTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAGNGGGATCGAATTGTCATGAGAGGTTATTACTATATGCCCAGTGGNAGTTGACGATACCGNCGGGATTGGTTCNAGNGGTGAACACGGCAAATGTACCGGAAAGAACACNCGGAAGGTAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGCAACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCAACNTNAAACCAACGATATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTTAGCGTTACCAACCGGTTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGNGGATAGGGACCTTAACAANTGCGAAACAATNACCCTTTACTTACCNAAACACACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCCGGACCCCAAGGGGAAAAGCGACACTTTACCACATCAATATGGACCCACGGGGTCTNCGGGACNTTCGGCTTAGGGTATCACAGAGAACTACCGGGCCACACAACANTCATACCCTTAACANGACAA] [+] EMBL AL695693 [ATCCCCCGCAGGTTATTGGTCATTTTCATATTTAGTCCTGTACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGCGTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAACTTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAGNGGGATCGAATTGTCATGAGAGGTTATTACTATATGCCCAGTGGNAGTTGACGATACCGNCGGGATTGGTTCNAGNGGTGAACACGGCAAATGTACCGGAAAGAACACNCGGAAGGTAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGCAACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCAACNTNAAACCAACGATATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTTAGCGTTACCAACCGGTTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGNGGATAGGGACCTTAACAANTGCGAAACAATNACCCTTTACTTACCNAAACACACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCCGGACCCCAAGGGGAAAAGCGACACTTTACCACATCAATATGGACCCACGGGGTCTNCGGGACNTTCGGCTTAGGGTATCACAGAGAACTACCGGGCCACACAACANTCATACCCTTAACANGACAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9472#0 AGAGTGCAATCAATATCGGGACAATTTGGAAAGTTTTACGACGAAAAATATAGAAATCAA 60 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 AAATAGAGACGACGAGTGGTTGTCGTTGGCGTAGTTGGTCATTTTCATATTTAGTT-TGT 119 consensus_9472#1 ------------------ATCCCCCGCAG-GTTATTGGTCATTTTCATATTTAGTCCTGT 41 * * * ** ********************* *** consensus_9472#0 ACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGCTGGTCTCATCGCTTCCGGAGC 179 consensus_9472#1 ACGCTAAACTGTATCAAAAAACCATCGCTCTCTTTTCGNTGGTCTCATCGCTTCCGGAGC 101 ************************************** ********************* consensus_9472#0 GTGGTCGTAGCTGATACAAGATTACACTATCATCATTTA--GATAATCGTCCCACCGAAC 237 consensus_9472#1 GTGGTCGTAGCTGATACAAGATTACACTATCATCATATATAGATAATCGTCCCACCGAAC 161 ************************************ ** ******************* consensus_9472#0 TTGAGACGCT-TGTGTTATCTTT-TGCCGTACGAAAAGCGCAATGCGTGG--CATAT-AG 292 consensus_9472#1 TTGAGACGCTATGTGTAATCTTTATGCCGTACGAANAAGCGCATGCGTGGGCCATATTAG 221 ********** ***** ****** *********** * ******** ***** ** consensus_9472#0 AGGGATCGAATGTTTGAGAGTTTACTTTGCCAGTGAGTGACGATCGTCGGTGTTTAGGTG 352 consensus_9472#1 NGGGATCGAATTGTCATGAG---AGGTTATTACTATATGCCCA--GTGGNAGTTGACGAT 276 ********** * *** * ** * * ** * * ** * *** * * consensus_9472#0 AACGCAAGTACGAAAACCGAGTGGTGTGCAGTTTCCGGTAGGTTAACACCGTAAGAAGCA 412 consensus_9472#1 ACCGNCGGGATTGGT-TCNAGNGGTGAACA-----CGGCAAAT--GTACCGGAAAGAACA 328 * ** * * * ** **** ** *** * * **** ** * ** consensus_9472#0 CCGGCAAGAATAGTAATGACGCGCCACGC--TTTATCCGTTGTGGTGCCTCAGGTCCTGC 470 consensus_9472#1 CNCGGAAGG-TAGGGCTGGTTCGCCAAGTGATATGTNCCCGGTGTTACCCCTTNGCCGGC 387 * * *** *** ** ***** * * * * * *** * ** * ** ** consensus_9472#0 GA-AT--ATGGCGCCGGCAAGCGGGACTACACTTCGTCGTTAGTACGTTCTGCTGGTT-C 526 consensus_9472#1 AACATTAATTGGGCCGGCCCCGAGGACCAAAGACCAGGGGGCA-ACNTNAAACCAACGAT 446 * ** ** * ****** **** * * * * ** * * consensus_9472#0 ACGTTGATATCATTCGTATGGTGCGGTGCTAACAATCTTCACATGAACGATGGCGTACG- 585 consensus_9472#1 ATACCGGCTCCAGNNATACAAGGTNAAACTGNTAACCTTGGCTT-AGCGTTACCAACCGG 505 * * ** ** * ** ** *** * * * ** * * ** consensus_9472#0 TACGCAGGACATCATTGCAGGTGATGTGTTTTTCGAAATTCTAGAACCTTCGGCCTTGGA 645 consensus_9472#1 TTCGGATNAATTTCCCAATTTCANNCCCGCGCTCNANNTTAGGGGGGTTNAGGACNCGGN 565 * ** * * * ** * ** * * ** * ** consensus_9472#0 GTACACGTATCGGTTGCGACCAGCGAAAGATTTCGGTGGCACGTTTGGCATTTCATACAA 705 consensus_9472#1 GGATAGGGACC--TTAACAANTGCGAAACAATN-------ACCCTTTACTTACCNAAACA 616 * * * * * * ** * ****** * * ** ** * * * * * consensus_9472#0 ATCTCCGCAAGGGAAACTGGTACCGGCGATTC--CAGCGGATGCGTGCTCTGCAAAATTC 763 consensus_9472#1 CACTTTGGANACAACCCCGGTGCAACTTAGCGGACACCGGTTTAACACCCGGTTAAACCC 676 ** * * * * *** * * ** *** * * * * *** * consensus_9472#0 GAAAACGCCGATGAGCTGGAGGGCAACATTGCACT-CGTCGAGCGGGGCCACTGTTCGTT 822 consensus_9472#1 GG--ACCCCAAGGGG---AAAAGCGACACTTTACCACATCAATATGGACCCACG---GGG 728 * ** ** * * * * ** *** * ** * ** * ** ** * * consensus_9472#0 TCTAACCAAAGCCATCAACGTGGAAGCGATAGGCGGCGCACATAATTGTGACCGAGTATG 882 consensus_9472#1 TCTN--CGGGACNTTCGGCTTAG--------GGTATCACAGAGAACT---ACCGGGCC-- 773 *** * * ** * * * ** * ** * ** * **** * consensus_9472#0 ATACGGAGATCGATGACTTTGACTACTACATCGAGATGGTGCATGACAATACCGACCGCG 942 consensus_9472#1 ACACAACANTC-ATACCCTTAAC-ANGACAA----------------------------- 802 * ** ** ** * ** ** * *** consensus_9472#0 ATACCGACATTCCGGCTGGATTTTTGCACGGCAAGAATGGAATAATTATTCGACAGACGC 1002 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 TAAAAAAGATGAACCTACCGTACGCGATCGTGAACATTCCCGTCAATCTCACCTTCATAC 1062 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 AGCCGCACATGATAAATCAACCGCCTTGGTTGCCTTGGTAAACGAGCCATAAAGCGGTGG 1122 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 TAACTTGATATTTTATCGGCTCGGCAACCGACAACACCATCTGCCGGAAACCGAACAAAG 1182 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 CAAACCAGTGTTGAACACAAAGATGACTGAAACAATGAGGACGCTAATGCTGTTGTTGGG 1242 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 GAAAATGTTACTATCATGGCTCTGGTTGGCGGACAGTCGCCATGTGCTGGAGTGCTGTAG 1302 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 CACATGGGATGTTGCAACGAGACTTAACACTCACTCGGTAACACTTGCACGAAAAGATCT 1362 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 GACGCAGACTCGTTTATTGAAACCGTTTTGGACCAGCACCGGATTGTGCCCACCGGAGCC 1422 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 GCGCAATGCAAGTGCAGCTTTTTTGCTATCGGAAGACACGTTGACAAACCTGGAGCTCAT 1482 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 TGGCTCTCTGCCGGCTCGTGGTTTTAGCCATGTGCGGATCCATTGGCTTCTAGAGCTTCT 1542 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 TGAAGTGTAAGTTACATCTAAAACCTTCCTAAGCGTAACATCACATTATCTTCAATGGCT 1602 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 AGAAAATGGAACCATAATTTGAATTTTCTTTCCAAAAACCAACGATTGCAAGCAGTGTAA 1662 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 GCAATATATCTCCAATTCCCCAAGACCATACAGAGTATGAGTATGATGTCATGATAGGGT 1722 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 ATGACACAGCAGCTGATTGTGATAACTTTGTTGTAAAATATATTCTGGTGATGAAAAAAA 1782 consensus_9472#1 ------------------------------------------------------------ consensus_9472#0 A 1783 consensus_9472#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||