These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9479#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1975 fasta sequence [GTGGCCTTTTTTTTTTTTTTTCGGTTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT-GGGAGTTAACAATGAATTTTAACGTGAAAT-TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA-ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC--CCAATA---CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGGCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTACCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTA-T-CTGCTCGTTGCCCCCGTCGGTCAGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGC-GGATCACGTAGTCGCGCAGGCTCAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAATACCTCGGGCAATTCT] [-] EMBL CNS09583 [GTGGCCTTTTTTTTTTTTTTTCGGTTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATTTTTTTTTTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGTTTTAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTG TAATA ] [+] EMBL CNS09584 [ TTTCGGTTGC GAGTT TAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGGGTGTGTTTGTTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCAAAAAAACTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAACATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATA CAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC CCAGTAGGCCAACAgttctcga ] [-] EMBL CNS09E7M [ TTATGCAGCAGATAGTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCG ] [+] EMBL CNS09E7N [ GTTCTCTCT GGGAGTTAACAATGAATTTTAACGTGAAAT TAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTAAATACGTCAACGAAATTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGTCCCTAACAAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGAAAGCCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTTGCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATA CAGATATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAAT ] [+] EMBL CNS096AX [ TCTCTGGGGAGTTAACAATGAATTTTAACGTGAAATCTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGGTTAGGCATATCCTGCTAACCGGACATTTTGATGATGGGATGTTCAATATACTTCGCGGTAGGAAATTAACTA ] [-] EMBL BM644244 [ TAGTTTTTCGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGG ] [-] EMBL BM597407 [ CGTGAATCTGATGTGCGATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTACTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGcgg ] [-] EMBL BM604571 [ ATAGCAGA ATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATA CAACATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCcgg ] [-] EMBL BM608079 [ AATA CACCATTGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACGGCACCGTCGTTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAGGCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGCAGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGGAACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGCGACAGTGCGTCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTACCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTA T CTGCTCGTTGCCCCCGTCGGTCAGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGC GG ] [-] EMBL AL930523 [ TCAGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGAAGTGNTGNTCGTTGCCCCCGTCGGTCAGATAGCTCAGGGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGCATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTGCGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGCTGGATGAAGGACAGCAGCGGCTGCA CCACGC CCAGCTTAATCACGTAGTCGCGCAGGCTCAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAATACCTCGGGCAATTCT] consensusID : consensus_9479#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1259 fasta sequence [AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTAT-GCAGAGCATTATACAATCCCTACTG-ATTCCACCAAAATCATTTGCTGGTGAAGATGATATTGTCAAAATAAGTGA-TTACAAGAACAGGACGATT-CTCGCTCATTTGTCCCTAAC-AAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTT-GTTGGGAGATAGCCGAGCAGATGAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTTGCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTTCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACATTGATCACTTGACAGTCCTGGCACATTACAGATCGCAGAACGCGGCACGCACAAAACCTNGGGGGGATT] [+] EMBL CNS09IUO [AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTATAGCAGAGCATTATACAATCCCTACTGAATTCCACC ] [-] EMBL CNS09IUN [ TGGGAGTTAACATTGTATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCTTCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGGACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAACAAAACTACGGGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTGACCCATCATCATCATCATCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGTTACGAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCAGCCCGATATTGGGCTGCCGTTCCGACCGCACTAGAACACATGCTTGTTTAT GCAGAGCATTATACAATCCCTACTG TTTCCACCAAAATCATTTGCTGGTGAAGATGATATTGTCAAAATAAGTGA TTACAAGAACAGGACGATT CTCGCTCATTTGTCCCTAAC AAAGAATTTCTTTGATGCTGCTGCTGTTTTGCTATTTCTGCTGTT GTTGGGAGATAGCCGAGCAGATGAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTTGCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTT ] [-] EMBL AL931356 [ ATGATATTGTC AAATAAGTGATTTACAAGACCAGGACGATTGGTCGCTCATTTGTCCCTTACTGAAGAATNTCTGTGATGCTGCT CTGTTTTGCTATTTCTGCTGTTCGTTGGGAGATA CCGAGCAGATTAAAATTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAGTCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACT GTGGTGTGTCTCTTGCCCGCGGCGAGCG AAC ACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCCGTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTCGTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCCGGGGAATGTTCGGATTCTGGTTGAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAACATCGTCCGAAAAGAACTGCTCAATGATGTCATACGCGAGCTTGTAAATTTCGACATTTTCGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAACGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACATTGATCACTTGACAGTCCTGGCACATTACAGATCGCAGAACGCGGCACGCACAAAACCTNGGGGGGATT] consensusID : consensus_9479#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1015 fasta sequence [AGGACAGCAGCGGCTGCACCACGCCCAGCTTAATCACGTAGTCGCGCAGGCTCGGCCCGTCGCCGATGATGTTGCCCAGGGCCAACACCGCCTGCTCGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC-AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGCACACCCACGCGTCCGCGG] [-] EMBL BM625454 [AGGACAGCAGCGGCTGCACCACGCCCAGCTTAATCACGTAGTCGCGCAGGCTCGGCCCGTCGCCGATGATGTTGCCCAGGGCCAACACCGCCTGCTCGCACACGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACGGCCCCGGCCCGCACCACCTGGTTCGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCCCAGGCCGCCTCGAACTGCAGCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCcgg ] [-] EMBL BM613116 [ GACTAAGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGGGGATTGCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCcgg ] [-] EMBL BM587030 [ GGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCC AGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGCACACCCACGCGTCCGCGG] [-] EMBL BM588159 [ ACGACAACAGGCGACGGGCGGCCTGCACCGCCGCCAAGCTGGCCCTCTTTGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACTGTAGTGTGTAGTCCTCCTCGTCGGTCGATTCTGTGGTCTGAGGAACGTTGCGTCGCTTGAGGATCGTCTCTTCGCGTTTGTTTTTGCGCAGCTCCACCGTAACCTCCGTTCGTCGCCGACGCATTTCATCCTGGTCCTTTCCTTTGTTTTTAAAACCCTGCATACGGTTTTTCGACTGGGAATCTATCGACGCCATTTTCGTACGGTGAGGCAAAACTTCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCCCTGACTCACACTCTCGCTTGCACTGCCTAGCGCGCACTCTTTCACACTGTCACAATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTCTCGGCACCGACGGGCAGCAATGGGAAACTGCGAAATCCGAATGGCAGATGGCGAGGTACGAACGCGTGTGCCGTGCTGAACGCGGTTCGCGTTAAACGGCTTTCGATGCTGAGCGTGCTCGTCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATTCGTCACGAAATATGCACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACCTTGCCTGCTCGg ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9479#0 ------------------------------------------------------------ consensus_9479#1 AAAGATAAAGTACACATTCATTGCTTATGCAGCAGATAGTTCTCTCTGGGAGTTAACAAT 60 consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 ------------------------------------------------------------ consensus_9479#1 GAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATACAAGTACACTATCTATCT 120 consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 ---------------------------------GTGGCCT---TTTTTTTTTTTTTTCGG 24 consensus_9479#1 TCTGGTTGGCTTGTAACCAGTAACGCACAAGCTGAAGATTAGACATATCCTGCTAACCGG 180 consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 TTGCAGAGTTCCAGGGTTTTCTGTTAGCCGAACCACACCCCCCAAAGGGTATGTGTGTGG 84 consensus_9479#1 ACATTTGATGATGGGATGTTCAATATACTTCGTGGTAGGAAATTAACTAAATATGTCAAC 240 consensus_9479#2 -------------AGGACAGCAGC-GGCTGCACCACGCCCAGCTTAAT-CACGTAGTCGC 45 * * * * * * consensus_9479#0 GTGTGTTTG-TTTGTTTACAATGAAGTTCACATTCATTGCTTATGCAGCA-GATAGTTCT 142 consensus_9479#1 AAAACTACG-GGTTTTGGTCCTAAATCATAAATCATCCTCTTTTGCGGTG-ACCCATCAT 298 consensus_9479#2 GCAGGCTCGGCCCGTCGCCGATGATGTT---GCCCAGGGCCAACACCGCCTGCTCGCACA 102 * * * * * * * consensus_9479#0 CTCTGGGAGTTAACAATGAATTTTAACGTGAAATTAGTCCAAAACAAAAGTTCTCTATAC 202 consensus_9479#1 CATCATCA-TCATCATTATCATCTCGAGCTACATTACCCTAAAACACGCTCTTTGT-TAC 356 consensus_9479#2 CGTTCGGGGCCGGCGAGTTGAGCAGGCGCAGGAACAG--CGGGACGG------CCCCGGC 154 * * * * * ** * consensus_9479#0 AAGTACACTATCTATCTTCTGGTTGGC-----TTGTAACCAGTAACGC--------ACAA 249 consensus_9479#1 GAGTGGAGTTACCTTTTCGTAGAAAACACAAATGGAAGTTAACATCGTTGATGATGATCA 416 consensus_9479#2 CCGCACCACCTGGTTCGTCTGTGCGGC------CGTGCCGGATGCGAT--------GTTG 200 * * * * * consensus_9479#0 GCTGAAGGTTAGGCATATCCTGCTAACCG------GACAT---TTTGATGATGGGATGTT 300 consensus_9479#1 GCCCGATATTGGGC-TGCCGTTCCGACCGCACTAGAACACATGCTTGTTTATGCAGAGCA 475 consensus_9479#2 GTGAGCGCCCAGGC---CGCCTCGAACTGC-----AGCAC---CTGGTTGTCGTCCTGCT 249 * *** * ** * ** * * * * * consensus_9479#0 CAATATACTTCGCGGTAG-------GAAATTAACTAAATACGTCAACGA-AATTACGGGT 352 consensus_9479#1 TTATACAATCCCTACTGATTCCACCAAAATCATTTGCTGGTGAAGATGA-TATTGTCAAA 534 consensus_9479#2 CGAGACAATTGACTA-AGATCGGGAGAATGCCGCTGTCGATGAGATTGTTAATCGGAGGA 308 * * * * ** * * * ** consensus_9479#0 TT---TGGTCCTAA----ATCATAAATCATCCTCTTTTGTCCCTAACAAA-GAATTTCTT 404 consensus_9479#1 ATAAGTGATTACAAGAACAGGACGATTCTCGCTCATTTGTCCCTAACAAA-GAATTTCTT 593 consensus_9479#2 TT--GCGGTCCGACGACAACAGGCGACGGGCGGCCTGCACCGCCGCCAGCTGGCCCTCTT 366 * * * * * * * * * ** * **** consensus_9479#0 TGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATTAAAA 464 consensus_9479#1 TGATGCTGCTGCTGTTTTGCTATTTCTGCTGTTGTTGGGAGATAGCCGAGCAGATGAAAA 653 consensus_9479#2 TGTCACTGCTGTTGCCGGCCTTCTCGACCAGCTTCTTCAGGTTCGACT-GTAGTGTGTAG 425 ** ****** ** ** * * * * * * * * * * ** * consensus_9479#0 TTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAG 524 consensus_9479#1 TTTACCATATAAATGCTCCTCTCTTTCTTCTCAGCGATGCTGCAGTCGTGCAAAAGCAAG 713 consensus_9479#2 TCCTCCTCGT---CGGTCGATTCTGTGGTCTGAGGAACGTTGC-GTCG------------ 469 * ** * * ** *** * *** ** * * *** **** consensus_9479#0 TCCTAAAAGTTGTGTGTTCGTATTCGGAGTCTGCTGTGACGTACTGGTGGTGTGTCTCTT 584 consensus_9479#1 TCCTAAAAGTTGTGTGTTCGTATTCGGAGACTGCTGTGACGTACTGGTGGTGTGTCTCTT 773 consensus_9479#2 -CTTGAGGATCGTCTCTTCGCGTT-------TGTTTTTGCGCAGCTCCACCGTAACCTCC 521 * * * * ** * **** ** ** * * ** * ** * consensus_9479#0 GCCCGCGGCGAGCGAAACAAACACCACCATAATTGGTTACTGACGTTCGCTAAAGTATCC 644 consensus_9479#1 GCTCGCGGCGAGCGAAACAAACACCACCATAATTGGTTGCTGACGTTCGCTATATTCTTC 833 consensus_9479#2 GTTCGTCGCCGACGC-----ATTTCATCCTGGTCCTTTCCTT-TGTTTTTAAAA----CC 571 * ** ** ** * ** * * * ** ** *** * * * consensus_9479#0 GTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTC 704 consensus_9479#1 GTGTCTTGTAGTTTTTCGTGAATCTGATGTGCGATAGCAGAATCCCATTCCCATTCCTTC 893 consensus_9479#2 CTG-CATACGGTTTTTCGA----CTGGGAATCTATCG----ACGCCATTTTCGTACG--- 619 ** * * ******** *** * ** * * ***** * * * consensus_9479#0 GTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTCGCGGGGAATGTTCGGATTCTGGTT 764 consensus_9479#1 GTGATTCTGTTCCGTAGCTTAGAAGTTGAACCCGTC-CGGGGAATGTTCGGATTCTGGTT 952 consensus_9479#2 GTGAGGCAAAACT----TCTGGGAGTTGAACAAAACGTGCTGTGTGCTGTGTGTGCGGCC 675 **** * * * * ******** * * * ** * * * ** consensus_9479#0 GAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAAC 824 consensus_9479#1 GAACTGGAACGCGTTCTCGTCAGCTGCCGGTCTAAGGTCTTCCAGGACAGCTTCGTCAAC 1012 consensus_9479#2 ---CTGACTCACACTCTCGCTTGCA--CTGCCTAGCGCGCACTCTTTCA-CACTGTCACA 729 *** * * ***** ** * * *** * * ** * **** consensus_9479#0 ATCGTCCGAAAAGAACTGCTCAATGATG-TCATACGCGAGCTTGTAAATTTCGACATTTT 883 consensus_9479#1 ATCGTCCGAAAAGAACTGCTCAATGATG-TCATACGCGAGCTTGTAAATTTCGACATTTT 1071 consensus_9479#2 ATTTTCGCGCTCCCTTCGCTCTCTCTCGCTCTCGCTCGAGCTC-TCGGCACCGACGG--- 785 ** ** **** * * ** * ****** * **** consensus_9479#0 CGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAA 943 consensus_9479#1 CGTGATTCTGCAAAACTTCAATCTTCGACACACCGTCGCATTCCTCGATCAGATTCGCAA 1131 consensus_9479#2 -GCAGCAATGGGAAACTGCGAAATCCGAA----TGGCAGATGGCGAGGTACGAA-CGCG- 838 * ** ***** * * * *** * * ** * * * ** *** consensus_9479#0 CGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACC--CCAATACAACAT 1001 consensus_9479#1 CGTGCTCTGCATGTGGGCCGGCCAGTTTCAGCATGTTGTTAATACCATCCAATACAACAT 1191 consensus_9479#2 TGTGCCGTGC-TGAACGCGGTTCGCGTTAAACG-GCTTTCGATGCT---GAGCGTGCTCG 893 **** *** ** ** * * ** * * * * * ** * * consensus_9479#0 TGATCACTTGACAGTCCTGGCACATTAGCAGATCGCAGAACGGCGGCACG-GCACCGTCG 1060 consensus_9479#1 TGATCACTTGACAGTCCTGGCACATTA-CAGATCGCAGAACG-CGGCACGCACAAAACCT 1249 consensus_9479#2 TCAGCGCACGGAAACACTTGCGGCTGCACAGTCTGCAGGATT-CGTCACG--AAATATGC 950 * * * * * * ** ** * *** **** * ** **** * consensus_9479#0 TTGATCAGCTGCGCCACCTGTTCGCGGTTGCCGCTGATCGTCAGGTTGCTGATCGCCCAG 1120 consensus_9479#1 NGGGGGGATT-------------------------------------------------- 1259 consensus_9479#2 ACGATTTGCTTTTCACCTGGCTTGGAGCAAAAACC--TTGCCTGCTCGCACACCCACGCG 1008 * * consensus_9479#0 GCTGCCTCCTTCTGCGTATGGAAGTCGCCGTGCTTCAGATTTTCGATCACCTTCGGCAGC 1180 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 TCCGCGG----------------------------------------------------- 1015 consensus_9479#0 AGACCGGCATCGATGACGGCCTGCACCTGCGATTGATTTCCGGCCGTTATGTTCGACAGG 1240 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 AACCATACTGCCTCCTTGCGGATCTTGTCCTTACTGTGCGTCAGCAGTTTGGGGAAGTGC 1300 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 GACAGTGCGGCACAGTTCAGCACGACCTGTGTCTGATCGTCCGAGCCGGTGACGATGTTA 1360 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 CCGACTGCACGAAGCGCGGCCGTCTGTACCTTAACCTCGACGTGCGACAGCAGCGGGATC 1420 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 AGCTTCGGCACCACGCCGCTGTCGATCACGAGCTGTATCTGCTCGTTGCCCCCGTCGGTC 1480 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 AGATAGCTCAGCGCCCACACCGTGTCGACCAGGATGTTGATGTCCGTGTGATGGATCAGC 1540 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 ATGTTCAGCGCCGGCAGAATCTCGAGAATCGTGGCGGCCGGTGGCGGCGGATCCTTGTTG 1600 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 CGGCACAGGTTCACGATCACCCAGGTGACGTTGCGCAGGAAGGGGATCGGAATTTCCGGC 1660 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 TGAATGAAGGACAGCAGCGGCTGCACCCACGCGTCCGCGGATCACGTAGTCGCGCAGGCT 1720 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 CAGGCCCGTCGCCGATGATGTTGCCCAGGGCCCACACCGCCTGCTCAGCACACGTTCGGG 1780 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 GCCGGCGAGTTGAGCAGGCGCAGGAACAGCGGGACAGGCCCCGGCCCGCACCACCTGGTT 1840 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 CGTCTGTGCGGCCGTGCCGGATGCGATGTTGGTGAGCGCNCCAGGCCGCCTCGAACTGCA 1900 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 GCACCTGGTTGTCGTCCTGCTCGAGACAATTGACTAAGATCGGGAGAATGCCGCTGTAAT 1960 consensus_9479#1 ------------------------------------------------------------ consensus_9479#2 ------------------------------------------------------------ consensus_9479#0 ACCTCGGGCAATTCT 1975 consensus_9479#1 --------------- consensus_9479#2 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||