These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9485#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 2000 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAGCCGAGGGAGC--AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG--TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT-AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCA-C-CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCCGGCGG] [+] EMBL BM604834 [CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAGTCGAGGGAGC ATAGAGAGAAAAAAATACGGGCTTACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAGCCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTACAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAGGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACTGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGC ] [+] EMBL CNS09J3U [ CTACGAAAGCACCAGCCGAGGGAGCATAGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCACCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTCAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACGGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCACCGGAAGAAGGCTCAAGTGGTGCTGGTCCACAACACTGGAGCA GTGTGTGTGTATTCATCGTCTTAC ] [+] EMBL CNS099M6 [ GAAAGCACAAGCCGAGGGAGC AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAACTAGAATATCTGCACCATGTCGCAACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTA ] [+] EMBL CNS08Y42 [ ACAAGCCGAGGGAGC AGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAACTAGAATATCTGCACCATGTCGCAACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGA CTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTG AAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTC ] [+] EMBL BM590083 [ ccgATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGGAACGGTCTACAACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTC ] [-] EMBL CNS08Y43 [ TCTGCACCTTGTCGCCACAGCAACCACCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCAAACTGGCAGTGGTCATAACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAAACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGTTGCTGCTCCCGATTCGGGCCCGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGATAGGAGGCTGTTGCAGCGGTCTCTTACAGCCACATCGCAGCAGTGTCCATTCATTGTAAGGAAATCAACAGCATCTTCAACCAGCAAACCATTCACCGAAAGAAGGCTCACGTGGTGCTGGTCCACAAAACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGcgtgaaa ] [-] EMBL CNS09J3V [ GCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGGAGTGACATTAATCGTGACATGATGGTAGGAGGCTGTTGCAGCGGTCTCTTACAGCCACATCGCAGCAGTGTCCATTCATTTTAAGGAAATCAACACCATCTTCAACCAGCAAACCATTCCCCGGAAGAAGGCTCACGTGGTGCTGGTCCACAAAACTGGAGCA GTGTGTGTGTATTCATCGTCTTACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTGTTTTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATG TTTGC ] [-] EMBL CNS099M7 [ ACCTCTTGTTTTATGTTGAGTGTG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTT ] [-] EMBL BX609350 [ TG TTTTTTTTGTTTTATTTAGACTGAATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTAGCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGGCTTACTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATGAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGG ] [+] EMBL BM655623 [ AGCGGGCTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGTGTGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCAGCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGCACAGGCAGAACTGATTTACCGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAAACGT AAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCAC ] [-] EMBL BM618041 [ ATATGGAATGGATGGAAATGAATGCGATGTAAAACGTAAAAAAGTTCGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGACAGTGGTGGTTCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCGGCTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCTGCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGGTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCACC CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCTGGCGG] [-] EMBL BM575206 [ GTACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGTACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCATACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACCAAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGCCAACCACCACCA C CACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCTCCGG ] [-] EMBL BX611433 [ gATGCCGCAAATGTCCTGTACACACCAAACGCGTCCGCCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACTCGTACTCCTTCGTTCGCGGAGACGGGAGAGGCGGGAGACGGT ] [-] EMBL BM585436 [ ATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGGCCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAGTCAACCACCACCA CTCACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGTGTTTTTCTTTGCcgg ] [-] EMBL BM601625 [ CCACCCACCAGTGAAACGATTCTTGAACACACCGTAAATCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGGTTTCGcgg ] consensusID : consensus_9485#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 768 fasta sequence [CCCCGAGGTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCTTGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCAGGCTATANNCTAACCGGAGATGTTGTTCATTGGCAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAGTNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTANTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAGACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACACTCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGGCTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACGGTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAAATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATCGTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTGTCATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA] [+] EMBL AL695059 [CCCCGAGGTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCTTGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCAGGCTATANNCTAACCGGAGATGTTGTTCATTGGCAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAGTNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTANTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAGACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACACTCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGGCTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACGGTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAAATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATCGTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTGTCATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA] consensusID : consensus_9485#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCGCGGACGCGTGGGCCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGACGCTGTTGGAACGGTCTACAACAGCC] [+] EMBL BM595094 [CCGCGGACGCGTGGGCCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCTGCAGCATGTCGCAACAGCAACCGCCGAAAAAGAAAGCTACCAAGGGCAACAAACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGCCACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTGTCCACACTGGCAGTGGTCATGACTGTCCTGTGCGTCGTAGCGCATGTGGCCAGCTATTACTTTATGGCGTTGATCAGCAAACCAAAACTTACCGAAAAGGGAGACATCATCGAGACGGGTACGGACCTCAACATTGAAGGAGGCATCACGGAACACGTGAAAGACATCGTGATCCTGACGGCCGGTACGCAGCTTGTATCCATGCTGTCGGAATTCTTCTGGCTGCTGATGCTGCTGCTCCCGATTCGGGCCGGCTGGCTGTTGTGGCAAACGGTGGGAAAACAGTTCTTCCAGGGCGATCCGGCAGAGGAGGCTCCTGTCAATGAGAAGAAGCAAAAGAAGCTAATGCGAAAGATGAACCGAGCGCGGCAGTGACATTAATCGTGACATGATGGTAGGACGCTGTTGGAACGGTCTACAACAGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9485#0 CCGCGGACGCGTGGGCGGACGCGTGGGTGTGTTTTGACTCGGCAACTACGAAAGCACCAG 60 consensus_9485#2 ---------------------------------------------CCGCGGACGCGTGGG 15 consensus_9485#1 -----------------------------------------------------CCCCGAG 7 * * consensus_9485#0 CCGAGGGAGCAGAGAGAAAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCT 120 consensus_9485#2 CCGAGGGAGCATAGAGAGAAAAAAATACACACTCACTGCATTGAACAAATTAAAATATCT 75 consensus_9485#1 GTTAATGAGAGAGAAAAAANAANAATACACACTCACTGCATTGAACAAACTAGAATATCT 67 * *** * * * ** ************************** ** ******* consensus_9485#0 -GCACC----ATGTCGCAACAGCAACCGCCGAAAAAGAAAGC---TACCAAGGGCAACAA 172 consensus_9485#2 -GCAGC----ATGTCGCAACAGCAACCGCCGAAAAAGAAAGC---TACCAAGGGCAACAA 127 consensus_9485#1 TGCAACCCAAATGTCGCAACAGCNATCACCGAAGAAAGAAACGTCTACCAAGGGCAACAA 127 *** * ************* * * ***** ** ** * *************** consensus_9485#0 ACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGC 232 consensus_9485#2 ACAGATCGTGGAGGAAAATGTGGCCACGGTTAAGTTTTACCGCAACATGTCGCTCATTGC 187 consensus_9485#1 ACAGATCGTGGAGGAAAATGTGGCCA-GGCTATANNCTAACCGGAGATGTTGTTCATTGG 186 ************************** ** ** ** * * **** * ****** consensus_9485#0 CACCGCGGTCCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTG----TCCACACTGGCAG 288 consensus_9485#2 CACCGCGGTGCAGTTTCTTGGGTTTGCCGTGTATGCGGAGCTG----TCCACACTGGCAG 243 consensus_9485#1 CAACGTGNACCANTTACTGTGGGTTATTGCCAGCGTGGGGCAGCTGCTCGACATTGGCAG 246 ** ** * ** ** ** ** ** * * ** ** * ** *** ****** consensus_9485#0 TGG--TCATGAC-TGTCC---TGTGCGTC-GTAGCGCATGTGGCCAGCTATTACTT---- 337 consensus_9485#2 TGG--TCATGAC-TGTCC---TGTGCGTC-GTAGCGCATGTGGCCAGCTATTACTT---- 292 consensus_9485#1 TNGATTCATGANCTGTCCAGATGTCGGTCAGTAGTCCTTNTTGTCCATGCTTACTTACTA 306 * * ****** ***** *** *** **** * * * * * ****** consensus_9485#0 -TATGGCG--TTGA-TCAGCAAA-CCAAA-ACTTA-CCGAAAAGGGA-GACATCATCGAG 389 consensus_9485#2 -TATGGCG--TTGA-TCAGCAAA-CCAAA-ACTTA-CCGAAAAGGGA-GACATCATCGAG 344 consensus_9485#1 NTATGGTGGTTTGACTCAGCAAAACCAAATACTTATCCGTAAAGGGACGACATCATCGAG 366 ***** * **** ******** ***** ***** *** ******* ************ consensus_9485#0 ACG-GGTA-CGGAC-CTCAA-CATTGAAGGAGG-CA-TCACGGAACACGTGAAA-GACA- 441 consensus_9485#2 ACG-GGTA-CGGAC-CTCAA-CATTGAAGGAGG-CA-TCACGGAACACGTGAAA-GACA- 396 consensus_9485#1 ACGTGGTAACGGACTCTCAAGCATTGAANGAGGGCACTCACGGAACACGTGAAAAGACAC 426 *** **** ***** ***** ******* **** ** ***************** **** consensus_9485#0 TCGTGATCCTGACGG--CCGGTAC-GCAGCTTGTATCCATGCTGTCGGAA-TTCTTCTGG 497 consensus_9485#2 TCGTGATCCTGACGG--CCGGTAC-GCAGCTTGTATCCATGCTGTCGGAA-TTCTTCTGG 452 consensus_9485#1 TCGTGATCCTGACGNGCNCAGTAGAGCAGCNNGTATCCATGCTGNCGGAAGTTCTTCTGG 486 ************** * *** ***** ************ ***** ********* consensus_9485#0 CTGCTGA--TGTTG--CTGCTCCCGATT-CGGGCCGGC-TGGCTGTTGT-GGCAAACG-- 548 consensus_9485#2 CTGCTGA--TGCTG--CTGCTCCCGATT-CGGGCCGGC-TGGCTGTTGT-GGCAAACG-- 503 consensus_9485#1 CTGCTGGATTGTTCGCNTGCTCCCGATTTCGGGCCGGCCTGTCTGTTGTTGGCTANNACG 546 ****** ** * *********** ********* ** ******* *** * consensus_9485#0 --GTGGGAAAACA-GT-TCTTCCA-GGGCGATCC-GGCAGAGGAGGCTCCTGTCAATGAG 602 consensus_9485#2 --GTGGGAAAACA-GT-TCTTCCA-GGGCGATCC-GGCAGAGGAGGCTCCTGTCAATGAG 557 consensus_9485#1 GTGTGGTAAAACACGTGTCTTCCACGGGCGATCCTGGCAGAGGAGGCTCCTGTTAATGAA 606 **** ****** ** ******* ********* ****************** ***** consensus_9485#0 AAGAA-GCAAAA-GAAGCTAATGCGAAAG-ATGAACCGAGCGCGG-CAGTGACATTAATC 658 consensus_9485#2 AAGAA-GCAAAA-GAAGCTAATGCGAAAG-ATGAACCGAGCGCGG-CAGTGACATTAATC 613 consensus_9485#1 ATGAACGCANACCGAAGCTAATGCGAAAGCATGAACCGAGCGCGGACAGTGACATTAATC 666 * *** *** * **************** *************** ************** consensus_9485#0 GT-GACATGATGGTAGG-AGGCTGTTGCAGCGGTCTCTAACAGCCAC-ATCGCAGCAGTG 715 consensus_9485#2 GT-GACATGATGGTAGG-ACGCTGTTGGAACGGTCTACAACAGCC--------------- 656 consensus_9485#1 GTAGACATGATGGTAGNGAGGCTGTTGCAGCGGTCTCTAACAGCCACTATCGCACAAGTG 726 ** ************* * ******* * ****** ******* consensus_9485#0 TCCATTCATTGTAAGGAAATCAACACC-ATCTTCAACCAGCAAACCATTCACCGAAAGAA 774 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 TC-ATTCATTGTAAGGAAATCAACAGGGATCTTCAAGCAGCAA----------------- 768 consensus_9485#0 GGCTCACGTGGTGCTGGTCCACAACACTGTAGCAGTGTGTGTGTGTGTATTCATCGTCTT 834 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 ACTGTTAAGCGCGACCTCTTGTTTTATGTTGAGTGTGTTTTTTTTGTTTTATTTAGACTG 894 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 AATATAAATAATTTTCATGCTTTGCTCTGAGCGGCTGCGTAAACGGTGAAAACCATGCTA 954 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 GCGAAAAGTGACCAAACACTGCCTGGAAGCTTTTCCAGCGCGATTTCTTCACCCAGCGGG 1014 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 CTTCCTCCTTTTTCAGCTGCTCTATGCCCGTTTCATCCGTCCATATTGCGTTCAGCTGGG 1074 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 TGCCGAGCATGATCATCGTGAAGACGGCAAACAGTAGCGCTTCCAGTATGAGGAAGAGCA 1134 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 GCAGTATCACGGTGGCCGGTGGCGAATAGTTGGAACACTCTCTCCACTCGTTTTTGATGC 1194 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 ACAGGCAGAACTGATTTACGGCCAGAAATATCGAATGGATGGAAATGAATGCGATGTAAA 1254 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 ACGTAAAAAGTACGAAAAACTTCTGATTGTTCTCCCCGACGCAGTTGTTTATCCACGGAC 1314 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 AGTGGTGGTCCATCTTGCGTATGCACCGCTGGCAGACGGAACAGTGGTGGGCACGCTCCG 1374 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 GTTTAATACTGCAGCATTTGGGACATTTGAAAAACACCTGCCCCTCCTGGTAGCCGAGCT 1434 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 GCTGGATCATTTCCTTCGTGGCGTTTCCTTTCGGTACGGCACCCGGATCGGACAGCATGG 1494 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 TACGCAGGTGTGATGCAAACGCCAGGAACGAGCCCGTGTTAAAGATAATAAAGTTAATGT 1554 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 ACCGATAGGCCTTGTAAGGATGGGGCAGCAGGATCACCATTGTGACGACGAATTCCGCAT 1614 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 ACAATATTAAACCCCACGTTAAAACGGCACAGATAATGCCGCAAATGTCCTGTACACACC 1674 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 AAACGCGTCCACCGCAGCAGCGGTTTTGCGTTTCCTTCTCGTTCCTCATCAGCATGTACT 1734 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 CGTACTCCATCGTTCGCGGAGACGGGAGAGGCGGGAGACGGTAGCAGCACCAAGATCCGG 1794 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 CCACCTATCCTCCAGACGAACTGTGGTGCAGCAGCAGCACCCACCGGAAGGGAATTGCAG 1854 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 CCAACCACCACCACCACCACCACCACCCACCAGTGAAACGATTCTTGAACACACCGTAAA 1914 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 TCAATCGATAGTACGCGGGCTGGGACGGAGAACGCAAAAATCGTTTCACATTCTGTAGGG 1974 consensus_9485#2 ------------------------------------------------------------ consensus_9485#1 ------------------------------------------------------------ consensus_9485#0 TTTCGTGTTTTTCTTTGCTCCGGCGG 2000 consensus_9485#2 -------------------------- consensus_9485#1 -------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||