cluster # 9488

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Anopheles gambiae
cluster # 9488 cluster # 9488 Sequences # 17 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9488#0 length = 603 sequences # 1
consensus_9488#1 length = 507 sequences # 12

consensus_9488#2 length = 483 sequences # 1
consensus_9488#3 length = 480 sequences # 2
consensus_9488#4 length = 479 sequences # 1

consensusID : consensus_9488#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 603
fasta sequence

                              [CCGCCCGCATCATCCCGAAGGCCGTCCTGTACTACACCGGCGAGGTGGTGGACGATGACGACGACGAGGATGATGAGGAGGAGGAGGAGGAAGAGGAGGACGACGATGAGGATATGGAGGATGGGGATGATGAGGAGGACGAGGAGGACGACGATGACGATGAGGAGGAGGAAAGTGCGCCGAAGCCACCGGCGGCGGCGAGCAATCGGGCGAAGAAGGCGAAGGGTGGCCGTGGAGCCGGTGGCGGCGGCGGCGGCAAAAAGGGCGAGCAGCCTCCGGAATGTAATCAGCAGTGAGGCGGAGAGGTGATAAGAAGAGAGATAGGAAGGCCGAACAAAAAGAAGAGGGCTGCTAGGTAAGCCTTTTGTGCAATAAAATCGGTGGGTGTAGAATTAGGTTTTAGTGGGATAAAAGTAACTATGAAACAAACAAATCCCACCCCACACAAGTACACGTACACACACTCACTATAAAGAGGCCATCGCCGCCCGATCATCGTAACGTGGCGCGCTGTACAGAGAGGGTTAGCTGTTACCCTGGAGCGCTCCGGGTGCGTGTGCAAATGTAAATGTGCTGGCAAAAGGGTGGAGACGATACACTACT]

[+] EMBL BM656075             [CCGCCCGCATCATCCCGAAGGCCGTCCTGTACTACACCGGCGAGGTGGTGGACGATGACGACGACGAGGATGATGAGGAGGAGGAGGAGGAAGAGGAGGACGACGATGAGGATATGGAGGATGGGGATGATGAGGAGGACGAGGAGGACGACGATGACGATGAGGAGGAGGAAAGTGCGCCGAAGCCACCGGCGGCGGCGAGCAATCGGGCGAAGAAGGCGAAGGGTGGCCGTGGAGCCGGTGGCGGCGGCGGCGGCAAAAAGGGCGAGCAGCCTCCGGAATGTAATCAGCAGTGAGGCGGAGAGGTGATAAGAAGAGAGATAGGAAGGCCGAACAAAAAGAAGAGGGCTGCTAGGTAAGCCTTTTGTGCAATAAAATCGGTGGGTGTAGAATTAGGTTTTAGTGGGATAAAAGTAACTATGAAACAAACAAATCCCACCCCACACAAGTACACGTACACACACTCACTATAAAGAGGCCATCGCCGCCCGATCATCGTAACGTGGCGCGCTGTACAGAGAGGGTTAGCTGTTACCCTGGAGCGCTCCGGGTGCGTGTGCAAATGTAAATGTGCTGGCAAAAGGGTGGAGACGATACACTACT]




>consensus_9488#0
CCGCCCGCATCATCCCGAAGGCCGTCCTGTACTACACCGGCGAGGTGGTGGACGATGACG
ACGACGAGGATGATGAGGAGGAGGAGGAGGAAGAGGAGGACGACGATGAGGATATGGAGG
ATGGGGATGATGAGGAGGACGAGGAGGACGACGATGACGATGAGGAGGAGGAAAGTGCGC
CGAAGCCACCGGCGGCGGCGAGCAATCGGGCGAAGAAGGCGAAGGGTGGCCGTGGAGCCG
GTGGCGGCGGCGGCGGCAAAAAGGGCGAGCAGCCTCCGGAATGTAATCAGCAGTGAGGCG
GAGAGGTGATAAGAAGAGAGATAGGAAGGCCGAACAAAAAGAAGAGGGCTGCTAGGTAAG
CCTTTTGTGCAATAAAATCGGTGGGTGTAGAATTAGGTTTTAGTGGGATAAAAGTAACTA
TGAAACAAACAAATCCCACCCCACACAAGTACACGTACACACACTCACTATAAAGAGGCC
ATCGCCGCCCGATCATCGTAACGTGGCGCGCTGTACAGAGAGGGTTAGCTGTTACCCTGG
AGCGCTCCGGGTGCGTGTGCAAATGTAAATGTGCTGGCAAAAGGGTGGAGACGATACACT
ACT

consensusID : consensus_9488#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 507
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCCCAAAAATTCTGAGGTTTGCTGAAAATCGAAATTG-TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAAT-----AAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGC-GGCGGG]

[+] EMBL BM628742             [CCGCCCACGCGTCCGCCCACGCGTCCGCAAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATG                                                      ]
[+] EMBL BM590745             [CCGCGGACGCGTGGGCGGACGCGT  GGGAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAA                                                                        ]
[+] EMBL BM597329             [                         CCGAAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTGCGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCT                                                           ]
[+] EMBL BM650669             [                          CCGAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTGCGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAAT     Agtt                                        ]
[+] EMBL BM651460             [                          CCGAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCT                                                           ]
[+] EMBL BX612849             [                          tCAAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCT                                                           ]
[+] EMBL BX614299             [                          tCAAAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCT                                                           ]
[+] EMBL BM577500             [                           ccgAAATTCTGAGGTTTGCTGAAAATCGAAATTG TGTCTTGCTTTGATCGGATCTCCTGCGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCT                                                           ]
[+] EMBL CNS08LNY             [                                                  actgGAAATTGTTTTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAA      AAAAAAAAAAAAAAAAAAAGGCCACATGTGCC            ]
[+] EMBL CNS09ACQ             [                                                     ctggATTG TGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTATATTGCAAACTTATCCATCCGCAACGCGTCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAA GGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAATAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGC GGCGGG]
[+] EMBL CNS08VCX             [                                                                   TGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAA GGGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAATTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAAA     AAAAACAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGAGGt]
[-] EMBL CNS09ACR             [                                                                                                                                                                                                                                                                                                                                                  GAGAGCGGATTGATCTACCTTAATTACAGCCCCCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATTAAAAT     AAAAAAAAAAAAAA                              ]




>consensus_9488#1
CCGCCCACGCGTCCGCCCACGCGTCCCCAAAAATTCTGAGGTTTGCTGAAAATCGAAATT
GTGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAAT
GCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGG
ATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGG
GGACTTCTTCGAAGAACATCGACGCAAGAATCGGGTGTACAATACCGTGCTCGCTGCGGG
TATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCTACCTTAA
TTACAGCCCGCCGAAAAGCCTGGACTAAGTGGGGATCAGGATGGCGACGTGTTGTAAACA
ACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAATAAAAAAAAAAAAAAAA
AAAGGCCACATGTGCCCGAGCGGCGGG

consensusID : consensus_9488#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence

                              [GCAACGCTCGAAAACAGAGCACGTTCGCCACCCTGCCACACCGAGCGCTCAGTCTCAGTTTGGCGCCTTTTTGATGTAGTTTTCGGTGACATCGCGCACCATTAGGTCGACCAGCTTGTCCAGATCGTACTTGTGCTGCCATCCCCAGTCCCGGCGCGCCTCACTATCATCGAAGATCTGTGGCCACGAGTCGGCAATGAGCTGTCGGCTGTCGGGCCCGATAGCTTACGTGCAGCTCGGGAATATACTTGGCCAGCTTCTCCACCAGCCCCTCGGGCGTAAAAAACATGGCAGTAACGTTGTACACTCGGCGCTGTAGCTTCTCCTCCGGTGCGGTCATGAACTCAAGCAACGAGCGCAACATCCACCGAGTGCGGCCGTCACTTTGCGTAGAGCATCCTTGCCCGAGAAGCCTGTCCAGTGCAGTTATTAGCGAGCTTGCCGGGGCGACGTCCTTATGGTTGGCCGCGGTCGATAAATCCA]

[+] EMBL CNS08WGZ             [GCAACGCTCGAAAACAGAGCACGTTCGCCACCCTGCCACACCGAGCGCTCAGTCTCAGTTTGGCGCCTTTTTGATGTAGTTTTCGGTGACATCGCGCACCATTAGGTCGACCAGCTTGTCCAGATCGTACTTGTGCTGCCATCCCCAGTCCCGGCGCGCCTCACTATCATCGAAGATCTGTGGCCACGAGTCGGCAATGAGCTGTCGGCTGTCGGGCCCGATAGCTTACGTGCAGCTCGGGAATATACTTGGCCAGCTTCTCCACCAGCCCCTCGGGCGTAAAAAACATGGCAGTAACGTTGTACACTCGGCGCTGTAGCTTCTCCTCCGGTGCGGTCATGAACTCAAGCAACGAGCGCAACATCCACCGAGTGCGGCCGTCACTTTGCGTAGAGCATCCTTGCCCGAGAAGCCTGTCCAGTGCAGTTATTAGCGAGCTTGCCGGGGCGACGTCCTTATGGTTGGCCGCGGTCGATAAATCCA]




>consensus_9488#2
GCAACGCTCGAAAACAGAGCACGTTCGCCACCCTGCCACACCGAGCGCTCAGTCTCAGTT
TGGCGCCTTTTTGATGTAGTTTTCGGTGACATCGCGCACCATTAGGTCGACCAGCTTGTC
CAGATCGTACTTGTGCTGCCATCCCCAGTCCCGGCGCGCCTCACTATCATCGAAGATCTG
TGGCCACGAGTCGGCAATGAGCTGTCGGCTGTCGGGCCCGATAGCTTACGTGCAGCTCGG
GAATATACTTGGCCAGCTTCTCCACCAGCCCCTCGGGCGTAAAAAACATGGCAGTAACGT
TGTACACTCGGCGCTGTAGCTTCTCCTCCGGTGCGGTCATGAACTCAAGCAACGAGCGCA
ACATCCACCGAGTGCGGCCGTCACTTTGCGTAGAGCATCCTTGCCCGAGAAGCCTGTCCA
GTGCAGTTATTAGCGAGCTTGCCGGGGCGACGTCCTTATGGTTGGCCGCGGTCGATAAAT
CCA

consensusID : consensus_9488#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 480
fasta sequence

                              [TTAGCTGTAAAAAATTCTGAGGTTTGCTGAAAATCGAAATTGTGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTATATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCATACCATTAATTACAGCCCAGCACG--GAGCCTGGACTAAGTCGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATG]

[+] EMBL CNS08S5F             [TTAGCTGTAAAAAATTCTGAGGTTTGCTGAAAATCGAAATTGTGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTATATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATCATACCATTAATTACAGCCCAGCACG  GA                                                                                                                         ]
[+] EMBL CNS08IHX             [       tcAAAAATTCTGAGGTTTGCTGAAAATCGAAATTGTGTCTTGCTTTGATCGGATCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTATATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAACTTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGACTTCTTCGAAGAACATCGACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCACATTGACTGTGGCCAAGGAGAGCGGATTGATC TACC TTAATTACAGCCC GC CGAAAAGCCTGGACTAAGTCGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGTGAAAATAAATCAGTCTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATG]




>consensus_9488#3
TTAGCTGTAAAAAATTCTGAGGTTTGCTGAAAATCGAAATTGTGTCTTGCTTTGATCGGA
TCTCCTACGTTTTTGTTAAACATCTACGGAGGAAGGAAAATGCTGCCCGTTCGTTATATT
GCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCCGTGGATACCATGGCCCCAACAAC
TTCCGTGTGTACACCATGAACGACATGCCTGTCCCGGAAGGGACTTCTTCGAAGAACATC
GACGCAAGAACCGGGTGTACAATACCGTGCTCGCTGCGGGTATTGTTATCTTTGGCATCA
CATTGACTGTGGCCAAGGAGAGCGGATTGATCATACCATTAATTACAGCCCAGCACGGAG
CCTGGACTAAGTCGGGATCAGGATGGCGACGTGTTGTAAACAACATATTAGATGTTTCGT
GAAAATAAATCAGTCTAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATG

consensusID : consensus_9488#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 479
fasta sequence

                              [TGTGGCGCTGGATCGTGCGCGGCGCGAACGAGGCACACGCGCTCGTAGTTGGTTTCTGATAATAACAGACAAGTGCAACCAAATCGTATCAAACATGCTTGCCGTGGAAAGGAGGATGATAGACACACACACACACACATACTCTATTATGCAGGGAGAGGATGTCATAGTAATTGAACGAAAGGAATCAGAAAAATCGATCGTAGCTAACCACAAAATCGTAACGAAAGTGTGATGCGCCTGAAATGATGAGAGTTTAGCGCTCTTTGGAGAGTTGCCTATAAAATATCATCCCCTCTGCCCCTTTTACTATCCACAAGTAACACGTAAACCGAGAACCCAAATTACAGGGTTTTCCAGGGGTTCTTATAGCTGTGGGACACTTCCTTGACTCTTTCTGATAGGAAGTGAACTACAAATGATGAAAATTGGACTTTTGGGCATGTTGCTTGAAAATTCCTATTGGATTTGTCCTACAA]

[+] EMBL BX611004             [TGTGGCGCTGGATCGTGCGCGGCGCGAACGAGGCACACGCGCTCGTAGTTGGTTTCTGATAATAACAGACAAGTGCAACCAAATCGTATCAAACATGCTTGCCGTGGAAAGGAGGATGATAGACACACACACACACACATACTCTATTATGCAGGGAGAGGATGTCATAGTAATTGAACGAAAGGAATCAGAAAAATCGATCGTAGCTAACCACAAAATCGTAACGAAAGTGTGATGCGCCTGAAATGATGAGAGTTTAGCGCTCTTTGGAGAGTTGCCTATAAAATATCATCCCCTCTGCCCCTTTTACTATCCACAAGTAACACGTAAACCGAGAACCCAAATTACAGGGTTTTCCAGGGGTTCTTATAGCTGTGGGACACTTCCTTGACTCTTTCTGATAGGAAGTGAACTACAAATGATGAAAATTGGACTTTTGGGCATGTTGCTTGAAAATTCCTATTGGATTTGTCCTACAA]




>consensus_9488#4
TGTGGCGCTGGATCGTGCGCGGCGCGAACGAGGCACACGCGCTCGTAGTTGGTTTCTGAT
AATAACAGACAAGTGCAACCAAATCGTATCAAACATGCTTGCCGTGGAAAGGAGGATGAT
AGACACACACACACACACATACTCTATTATGCAGGGAGAGGATGTCATAGTAATTGAACG
AAAGGAATCAGAAAAATCGATCGTAGCTAACCACAAAATCGTAACGAAAGTGTGATGCGC
CTGAAATGATGAGAGTTTAGCGCTCTTTGGAGAGTTGCCTATAAAATATCATCCCCTCTG
CCCCTTTTACTATCCACAAGTAACACGTAAACCGAGAACCCAAATTACAGGGTTTTCCAG
GGGTTCTTATAGCTGTGGGACACTTCCTTGACTCTTTCTGATAGGAAGTGAACTACAAAT
GATGAAAATTGGACTTTTGGGCATGTTGCTTGAAAATTCCTATTGGATTTGTCCTACAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9488#1      ------------------------------------------------------CCGCCC 6
consensus_9488#3      ------------------------------------------------------------
consensus_9488#4      ------------------------------------------------------------
consensus_9488#0      CCGCCCGCATCATCCCGAAGGCCGTCCTGTACTACACCGGCGAGGTGGTGGACGATGACG 60
consensus_9488#2      ----------------------------------------GCAACGCTCGAAAACAGAGC 20
                                                                                  

consensus_9488#1      ACGCGTCCGCCCACGCGTCCCCAAAAATTCTGA---GGTTTGCTGAAAATCGAAATTGTG 63
consensus_9488#3      -------------TTAGCTGTAAAAAATTCTGA---GGTTTGCTGAAAATCGAAATTGTG 44
consensus_9488#4      -----TGTGGCGCTGGATCGTGCGCGGCGCGAAC--GAGGCACACGCGCTCGTAGTTGGT 53
consensus_9488#0      ACGACGAGGATGATGAGGAGGAGGAGGAGGAAGA--GGAGGACGACGATGAGGATATGGA 118
consensus_9488#2      ACGTTCGCCACCCTGCCACACCGAGCGCTCAGTCTCAGTTTGGCGCCTTTTTGATGTAGT 80
                                                                           *  *   

consensus_9488#1      TCTTGCTTTGATCGGATC--TCCTAC--GTTTTTGTTAAACATCTA---CGGAGGAAGGA 116
consensus_9488#3      TCTTGCTTTGATCGGATC--TCCTAC--GTTTTTGTTAAACATCTA---CGGAGGAAGGA 97
consensus_9488#4      TTCTGATAATAACAGACAAGTGCAACCAAATCGTATCAAACATGCTTGCCGTGGAAAGGA 113
consensus_9488#0      GGATGGGGATGATGAGGAGGACGAGGAGGACGACGATGACGATGAGG--AGGAGGAAAGT 176
consensus_9488#2      TTTCGGTGACATCGCGCACCATTAGGTCGACCAGCTTGTCCAGATCGTACTTGTGCTGCC 140
                          *                                    *                  

consensus_9488#1      AAATGCTGCCCGTTCGTTCTATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCC 176
consensus_9488#3      AAATGCTGCCCGTTCGTTATATTGCAAACTTATCCATCCGCAACGCGGCATTTCTGTCCC 157
consensus_9488#4      GGATGATAGACACACACACACACACATACTCTATTATGCAGGGAGAGGATGTCATAGTAA 173
consensus_9488#0      GCGCCGAAGCCACCGGCGGCGGCGAGCAATCGGGCGAAGAAGGCGAAGGGTGGCCGTGGA 236
consensus_9488#2      ATCCCCAGTCCCGGCGCGCCTCACTATCATCGAAGATCTGTGGCCACGAGTCGGCAATGA 200
                                *                  *                 *            

consensus_9488#1      GTGGATACCAT--GGCCCCAACAACTTCCGTGTGTA-CACCATGAACGA-CATGCCTGTC 232
consensus_9488#3      GTGGATACCAT--GGCCCCAACAACTTCCGTGTGTA-CACCATGAACGA-CATGCCTGTC 213
consensus_9488#4      TTGAACGAAAG--GAATCAGAAAAATCGATCGTAGC-TAACCACAAAAT-CGTAACGAAA 229
consensus_9488#0      GCCGGTGGCGGC-GGCGGCGGCAAAAAGGGCGAGCAGCCTCCGGAATGT-AATCAGCAGT 294
consensus_9488#2      GCTGTCGGCTGTCGGGCCCGATAGCTTACGTGCAGC---TCGGGAATATACTTGGCCAGC 257
                                   *        *        *        *   **      *       

consensus_9488#1      CCGGAAGGGGACTTCTTCGAAGAACATCGA-CGC------AAGAATCGGGTGTACAATAC 285
consensus_9488#3      CCGGAAGGG-ACTTCTTCGAAGAACATCGA-CGC------AAGAACCGGGTGTACAATAC 265
consensus_9488#4      GTGTGATGCGCCTGAAATGATGAGAGTTTAGCGCTCTTTGGAGAGTTGCCTATAAAATAT 289
consensus_9488#0      GAGGCGGAGAGGTGATAAGAAGAGAGATAGGAAGGCCGAACAAAAAGAAGAGGGCTGCTA 354
consensus_9488#2      TTCTCCACCAGCCCCTCGGGCGTAAAAAACATGGC---AGTAACGTTGTACACTCGGCGC 314
                                        *  *                   *                  

consensus_9488#1      CGTGCTCGCTGCGGGTATTGTTATCTTTG-GCATCACATTGACTGTGG-CCAAGGAGAGC 343
consensus_9488#3      CGTGCTCGCTGCGGGTATTGTTATCTTTG-GCATCACATTGACTGTGG-CCAAGGAGAGC 323
consensus_9488#4      CATCCCCTCTGCCCCTTTTACTATCCACAAGTAACACGTAAACCGAGA-ACCCAAATTAC 348
consensus_9488#0      GGTAAGCCTTTTGTGCAATAAAATCGGTGGGTGTAGAATTAGGTTTTA-GTGGGATAAAA 413
consensus_9488#2      TGTA-GCTTCTCCTCCGGTGCGGTCATGAACTCAAGCAACGAGCGCAACATCCACCGAGT 373
                        *   *           *    **                                   

consensus_9488#1      GGATTGATC-TACC-TTAATTACAGCC-CGCCGAAAAGCCTGGAC-TAAGTGGGGATCAG 399
consensus_9488#3      GGATTGATCATACCATTAATTACAGCC-CAGCACGGAGCCTGGAC-TAAGTCGGGATCAG 381
consensus_9488#4      AGGGTTTTC-CAGGGGTTCTTATAGCTGTGGGACACTTCCTTGAC-TCTTTCTGATAGGA 406
consensus_9488#0      GTAACTATGAAACAAACAAATCCCACCCCACACAAGTACACGTACACACACTCACTATAA 473
consensus_9488#2      GCGGCCGTCACTTTGCGTAGAGCATCCTTGCCCGAGAAGCCTGTC--CAGTGCAGTTATT 431
                             *                 *                  *               

consensus_9488#1      GATGG-CGACGTGTTGTAAACAACATA---TTAGATGTTTCGTGAAAATAAATCAGT-CT 454
consensus_9488#3      GATGG-CGACGTGTTGTAAACAACATA---TTAGATGTTTCGTGAAAATAAATCAGT-CT 436
consensus_9488#4      AGTGAACTACAAATGATGAAAATTGGACTTTTGGGCATGTTGCTTGAAAATTCCTAT-TG 465
consensus_9488#0      AGAGGCCATCGCCGCCCGATCATCGTAACGTGGCGCGCTGTACAGAGAGGGTTAGCTGTT 533
consensus_9488#2      AGCGAGCTTGCCGGGGCGACGTCCTTATGGTTGGCCGCGGTCGATAAATCCA-------- 483
                         *  *           *       *   *                *            

consensus_9488#1      AAATGAAAATAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCGGCGGG------- 507
consensus_9488#3      AAATGAAAAAAAAAAAAAAAAAAAAAAAA----AAAAAAGGCCAAATG------------ 480
consensus_9488#4      GATTTGTCCTACAA---------------------------------------------- 479
consensus_9488#0      ACCCTGGAGCGCTCCGGGTGCGTGTGCAAATGTAAATGTGCTGGCAAAAGGGTGGAGACG 593
consensus_9488#2      ------------------------------------------------------------
                                                                                  

consensus_9488#1      ----------
consensus_9488#3      ----------
consensus_9488#4      ----------
consensus_9488#0      ATACACTACT 603
consensus_9488#2      ----------