These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9505#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1602 fasta sequence [ACTCGTGATTGTGCACGCACGT-GCGGCGGA-CATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGACACAGGCAAGCAGCTCGGCAGACCGCTCGTGGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGAAGGTAATCGCTGGACACACAGCGGCTGTCACGGCCGTCCGTTGGGGAGGTTCCGGGCTGCTCTACACCTCGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGTGCAAAACGTTCACGGGTCACGCGCACT-GGGTGAATAATTTGGCGCTCAACACGGACTACGTGCTGCGGACGGGCCCGTTTCACCCGGTGATGGACAAATTTAAGATGTACGGGGACGGCGCGGATAAGGACGCCCTCAAGCAGCTGGCGCTCGAGCGGTACGAGCAGGTGTGCCCGGACGGGGTGGAATCGTTCGTCTCGTGTTCGGACGACTTTACGCTGTATCTGTGGCGCGCGAACCAGAAACAGTTCGTGACGCGCATGACCGGCCACCAGAATGTGGTGAACGATGTGAAGTACTCGCCGGACGTGAAGTTTATTGCGTCCGCTTCGTTCGACAAATCGATCCGGCTGTGGCGGGCCGGCGATGGGGCGTTCATTTGTGCCTTGCGCGGTCACGTGCAGGCCGTCTACACGGTGAGCTGGTCGGCCGATTCGCGGCTAGTGCTTAGCGGCAGCAAGGACTCAACCCTCAAGGTGTGGAGTGTGAAGGAGCGCAAGCTGGTGCAGGAGCTGCCCGGACACGCGGACGAAGTGTACGGCGTGGATTGGGCACCGGACGGTTCCCGCGTTGCTTCCGGTGGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCAAACACATACGTCCACATCCATTTCCATACCGCTCGGGTTTATGTTAAATAAGAT] [+] EMBL CNS09MR6 [ACTCGTGATTGTGCACGCACGTCGCGGCGGA CATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCT ] [+] EMBL BM652816 [ccgCGTGATTGTGCACGCACGT GCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGG ] [+] EMBL BX628416 [ TGTGCATGCACGT GCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTCCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCTGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACGTGCACTGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGACACAGGCAAGCAGCTCGGCAGACCGCTCGTGGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGA ] [+] EMBL CNS09OL3 [ T GGGGCGGA GATATTTTTGTGCGAGGCTTTTGAAAACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGATGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAATGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAG CGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGACACAGGCAAGCAGCTCGGCAGACCGCTCGTGGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGAAGGTAATCGCTGGACACACAGCGGCTGTCACGGCCGTCCGTTGGGGAGGTTCCGGGCTGCTCTACACCTCGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGTGCAAAACGTTCACGGGTCACGCGCACTGGGGTGAATAATTTGGCGCTCAACACGGACTACGTGCTGCGGACGGGCCC ] [+] EMBL BM579239 [ ccg CATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATG ] [+] EMBL BX628000 [ TTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTCCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCTGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACGTGCACTGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGACACAGGCAAGCAGCTCGGCAGACCGCTCGTGGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGAAAGTAATCGCTGGGCACACAG ] [+] EMBL BX620502 [ AAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGG ] [-] EMBL CNS09OL4 [ AGCTCGGCAGACCGCTCGTGGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGAAGGTAATCGCTGGACACACAGCGGCTGTCACGGCCGTCCGTTGGGGAGGTTCCGGGCTGCTCTACACCTCGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGTGCAAAACGTTCACGGGTCACGCGCACT GGGTGAATAATTTGGCGCTCAACACGGACTACGTGCTGCGGACGGGCCCGTTTCACCCGGTGATGGACAAATTTAAGATGTACGGGGACGGCGCGGATAAGGACGCCCTCAAGCAGCTGGCGCTCGAGCGGTACGAGCAGGTGTGCCCGGACGGGGTGGAATCGTTCGTCTCGTGTTCGGACGACTTTACGCTGTATCTGTGGCGCGCGAACCAGAAACAGTTCGTGACGCGCATGACCGGCCACCAGAATGTGGTGAACGATGTGAAGTACTCGCCGGACGTGAAGTTTATTGCGTCCGCTTCGTTCGACAAATCGATCCGGCTGTGGCGGGCCGGCGATGGGGCGTTCATTTGTGCCTTGCGCGGTCACGTGCAGGCCGTCTACACGGTGAGCTGGTCGGCCGATTCGCGGCTAGTGCTTAGCGGCAGCAAGGACTCAACCCTCAAGGTGTGGAGTGTGAAGGAGCGCAAGCTGGTGCAGGAGCTGCCCGGACACGCGGACGAAGTGTACGGCGTGGATTGGGCACCGGACGGTTCCCGCGTTGCTTCCGGTGGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCAAACACATACGTCCACATCCATTTCCATACCGCTCGGGTTTATGTTAAATAAGAT] [+] EMBL BM654928 [ ccgGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGAAGGTAATCGCTGGACACACAGCGGCTGTCACGGCCGTCCGTTGGGGAGGTTCCGGGCTGCTCTACACCTCGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGTGCAAAACGTTCACGGGTCACGCGCACT GGGTGAATAATTTGGCGCTCAACACGGACTACGTGCTGCGGACGGGCCCGTTTCACCCGGTGATGGACAAATTTAAGATGTACGGGGACGGCGCGGATAAGGACGCCCTCAAGCAGCTGGCGCTCGAGCGGTACGAGCAGGTGTGCCCGGACGGGGTGGAATCGTTCGTCTCGTGTTCGGACGACTTTACGCTGTATCTGTGGCGCGCGAACCAGAAACAGTTCGTGACGCGCATGACCGGCCACCAGAATGTGGTGAACGATGTGAAGTACTCGCCGGACGTGAAG ] [+] EMBL BM579586 [ ccgGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGTGCAAAACGTTCACGGGTCACGCGCACT GGGTGAATAATTTGGCGCTCAACACGGACTACGTGCTGCGGACGGGCCCGTTTCACCCGGTGATGGACAAATTTAAGATGTACGGGGACGGCGCGGATAAGGACGCCCTCAAGCAGCTGGCGCTCGAGCGGTACGAGCAGGTGTGCCCGGACGGGGTGGAATCGTTCGTCTCGTGTTCGGACGACTTTACGCTGTATCTGTGGCGCGCGAACCAGAAACAGTTCGTGACGCGCATGACCGGCCACCAGAATGTGGTGAACGATGTGAAGTACTCGCCGGACGTGAAGTTTATTGCGTCCGCTTCGTTCGACAAATCGATCCGGCTGTGGCGGGCCGGCGATGGGGCGTTCATTTGTGCCTTGCGCGGTCACGTGCTGGCCGTCTACACGGTGAGCTGGTCGGCCGATTCGCGGCTAGTGCTTAGCGGCAGCAAGGACTCAACCCTCAAGGTGTGGAGTGTGAAGGAGCGCAAGCTGGTGCAGGAGCTGCCCGGACACGCGGACGAAGTGTACGGCGTGGATTGGGCACCGGACGGGTCCCGCGTTGCTTCCGGTGGCAAAGATAAGGTGTTAAAACTGTGGGCATATTA ] consensusID : consensus_9505#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 952 fasta sequence [CTACTGGACATTTGACATTTGTCGACTCGTGATTGTGAACGCACGTGCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGTTCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTTGCTCGCCTTCAGCCCGAACAGCATACTTCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTTTCTGGCGAGCGCGGGCAACGATAACGATGCGCGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCCAACACACTACGTCCACATCCATTTCCATACCGCTCCGGTTTATGTTAAATAAGATCGAAATGAAATGATTTATTCCCACATTTGAAAAAAACAAAAAAAAAAAAAAGGGCAAAT] [-] EMBL CNS099IZ [CTACTGGACATTTGACATTTGTCGACTCGTGATTGTGAACGCACGTGCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGTTCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTTGCTCGCCTTCAGCCCGAACAGCATACTTCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTTTCTGGCGAGCGCGGGCAACGATAACGATGCGCGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCCAACACACTACGTCCACATCCATTTCCATACCGCTCCGGTTTATGTTAAATAAGATCGAAAT ] [+] EMBL CNS099IY [ TGATTGTGCACGCAC GCGGCGGAG ATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAG CGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGGCGAGCGCGGGCAACGATAACGATGCGCGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCCAACACACTACGTCCACATCCATTTCCATACCGCTCCGGTTTATGTTAAATAAGATCGAAATGAAATGATTTATTCCCACATTTGAAAAAAACAAAAAAAAAAAAAAGGGCAAAT] [-] EMBL CNS09MR7 [ GGATTTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAATGTTTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGAAGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTTTCTGGCGAGCGCGGGCAACGATAACGATGCGCGCAAAGATAAGGTGTTAAAACTGTGGGCATATTAAGCCACAACCCAACACACTACGTCCACATCCATTTCCATACCGCTCCGGTTTATGTTAAATAAGATCGAAATGAAATGA ] consensusID : consensus_9505#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 759 fasta sequence [GGCAGAATCGGCACGAGGCATGCACGTGCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGGATCAAGGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTCCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCTGAGGCGGTCGTTTCGCTCGCCGTTCAGGCCCGAACAGCATACATCTGGGCTAGCGGCTCGGGCGACGAAAACGCTACGGCATAGTAGGGGATCTGGAACACCGAGACGCCNCCACTACACGTGCACTGGCCACCGGCAGTGGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCCTGAAAAGGGTCGGGCCGTTCCGAGNCATTTTGGCAAAAGGGGCACGGGGCGGCAAGAAATTCCGGCATTCNTGGGGTCCCCCCGGGGGAACCACCAAGGGCAGAAGANCAAGCATCCGGGAGCAGGNACCCGNNNATCCGGTTGGGAGCCC] [+] EMBL BX468850 [GGCAGAATCGGCACGAGGCATGCACGTGCGGCGGAGCATATTTTTGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGGATCAAGGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTCCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCTGAGGCGGTCGTTTCGCTCGCCGTTCAGGCCCGAACAGCATACATCTGGGCTAGCGGCTCGGGCGACGAAAACGCTACGGCATAGTAGGGGATCTGGAACACCGAGACGCCNCCACTACACGTGCACTGGCCACCGGCAGTGGGGTAATGTGTGTGGCCTGGGCACCGGATTCGCCTGAAAAGGGTCGGGCCGTTCCGAGNCATTTTGGCAAAAGGGGCACGGGGCGGCAAGAAATTCCGGCATTCNTGGGGTCCCCCCGGGGGAACCACCAAGGGCAGAAGANCAAGCATCCGGGAGCAGGNACCCGNNNATCCGGTTGGGAGCCC] consensusID : consensus_9505#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 654 fasta sequence [CGACCCACGCGTCCGGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGT-AATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACA] [+] EMBL BM654934 [CGACCCACGCGTCCGGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGT AATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACA] [+] EMBL BM652473 [ ccgGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTC GGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGTAAATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGA ] [+] EMBL BX602372 [ AGTACTGAGCACGACGATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGATGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCTGGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGTGAACGACGACGAGATCAAGGAATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAATGCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTGTCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCCTTCAGCCCGAACAGCATACATCTGGCTAGCGGCTCGGGCGACAAAACGCTACGGCTGTGGGATCTGAACACCGAGACGCCCCACTACACCTGCACCGGCCACCGGCAGTGGGT AATGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGATTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCG ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9505#1 CTACTGGACATTTGACATTTGTCGACTCGTGATTGTGAACGCACGTGCGGCGGAGCATAT 60 consensus_9505#3 --------------------------------------------------CGACCCACGC 10 consensus_9505#0 ------------------------ACTCGTGATTGTGCACGCACGTGCGGCGGA-CATAT 35 consensus_9505#2 -------------------GGCAGAATCGGCACGAGGCATGCACGTGCGGCGGAGCATAT 41 ** ** consensus_9505#1 TTTTG-TGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGAC 119 consensus_9505#3 GTCCGGTGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGAC 70 consensus_9505#0 TTTTG-TGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGAC 94 consensus_9505#2 TTTTG-TGCGAGGCTTTTGAATACTTTTGAACGTAAACTTCGTGTAGTACTGAGCACGAC 100 * * ****************************************************** consensus_9505#1 GATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGA 179 consensus_9505#3 GATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGA 130 consensus_9505#0 GATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGA 154 consensus_9505#2 GATGGAAGTGGACGAAAACGAACCAACAACGCGCACGGTGCAGGCCCGGTTCGTGTCGGA 160 ************************************************************ consensus_9505#1 TGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCT 239 consensus_9505#3 TGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCT 190 consensus_9505#0 TGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCT 214 consensus_9505#2 TGTTGGAGAAGAAGCGGGCCCACCGTTGGCGCTGCCGATCAACGTCACCAAGGAGCAGCT 220 ************************************************************ consensus_9505#1 GGAACTGTTCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGT 299 consensus_9505#3 GGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGT 250 consensus_9505#0 GGAACTGATCTGCAACGCACTATTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGT 274 consensus_9505#2 GGAACTGATCTGCAACGCACTGCTGAAGAATGAGCAACAAACGCCGTACCTGTTTTTCGT 280 ******* ************* ************************************* consensus_9505#1 GAACGACGACGAG-ATCAAGG-AATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAAT 357 consensus_9505#3 GAACGACGACGAG-ATCAAGG-AATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAAT 308 consensus_9505#0 GAACGACGACGAG-ATCAAGG-AATCGGTTGAGCAAACCGTCGACAGCAAACGACTCAAT 332 consensus_9505#2 GAACGACGACGAGGATCAAGGGAATCGGTTGAGCAAACCGTCGACAGCAAGCGACTCAAT 340 ************* ******* **************************** ********* consensus_9505#1 GCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTG 417 consensus_9505#3 GCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTG 368 consensus_9505#0 GCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTTCGGGTGCGGGCCGTG 392 consensus_9505#2 GCGGAAGATGTGCTCGACATCGTGTACCAGCCGCAGGCCGTGTTCCGGGTGCGGGCCGTG 400 ******************************************** *************** consensus_9505#1 TCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTTGCTCGCC-TTCAG 476 consensus_9505#3 TCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCC-TTCAG 427 consensus_9505#0 TCGCGCTGCACCAGCACCATGCCCGGCCATGCCGAGGCGGTCGTTTCGCTCGCC-TTCAG 451 consensus_9505#2 TCGCGCTGCACCAGCACCATGCCCGGCCATGCTGAGGCGGTCGTTTCGCTCGCCGTTCAG 460 ******************************** ************* ******* ***** consensus_9505#1 -CCCGAACAGCATACTTCTGG-CTAGCGGCTCGGGCGAC-AAAACGCTACGGC----TGT 529 consensus_9505#3 -CCCGAACAGCATACATCTGG-CTAGCGGCTCGGGCGAC-AAAACGCTACGGC----TGT 480 consensus_9505#0 -CCCGAACAGCATACATCTGG-CTAGCGGCTCGGGCGAC-AAAACGCTACGGC----TGT 504 consensus_9505#2 GCCCGAACAGCATACATCTGGGCTAGCGGCTCGGGCGACGAAAACGCTACGGCATAGTAG 520 ************** ***** ***************** ************* * consensus_9505#1 GGGATCTG-AACACCGAGACGCCCC-ACTACACCTGCACCGGCCACCGGCAGTGGG-TAA 586 consensus_9505#3 GGGATCTG-AACACCGAGACGCCCC-ACTACACCTGCACCGGCCACCGGCAGTGGG-TAA 537 consensus_9505#0 GGGATCTG-AACACCGAGACGCCCC-ACTACACCTGCACCGGCCACCGGCAGTGGG-TAA 561 consensus_9505#2 GGGATCTGGAACACCGAGACGCCNCCACTACACGTGCACTGGCCACCGGCAGTGGGGTAA 580 ******** ************** * ******* ***** **************** *** consensus_9505#1 TGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGA 646 consensus_9505#3 TGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGA 597 consensus_9505#0 TGTGTGTGGCCTGGGCACCGGATTCGCTGAAGGTGGCGTCGGCTTGCAAGGCGGGCGAGA 621 consensus_9505#2 TGTGTGTGGCCTGGGCACCGGATTCGCCTGAAAAGG-GTCGGGCCGTTC--CGAGNCATT 637 *************************** * ** ***** * ** * * consensus_9505#1 TTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACAAGA 706 consensus_9505#3 TTCGCATCTGGTCCCCGGATACAGGCAAGCAGCTCGGCAGACCGCTCGTAGGCCACA--- 654 consensus_9505#0 TTCGCATCTGGTCCCCGGACACAGGCAAGCAGCTCGGCAGACCGCTCGTGGGCCACAAGA 681 consensus_9505#2 TTGGCAAAAGGGGCACGGGGC--GGCAAGAAATTCCGG----CATTCNTGGGGTCCCCCC 691 ** *** ** * *** ****** * ** * * ** * ** * consensus_9505#1 AGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTTTCTGG 766 consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 AGTGGATCAGCTGCCTGTCCTGGGAACCGTACCATCGCAATGCGGAGTGCCGGTATCTGG 741 consensus_9505#2 GGGGGAACCAC--CAAGGGCAGAAGANCAAGCATCCGGGAGCAGGNACCCGNNNATCCGG 749 consensus_9505#1 CGAGCGCGGGCAACGATAACGATGCGCGCAAA---GATAAGGTGTTAAAACTGTGGGCAT 823 consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 CGAGCGCGGGCAACGATAACGATGCGCGCATATGGGACGTGGTGTTGGGCACGTGCGTGA 801 consensus_9505#2 TTGG-GAGCCC------------------------------------------------- 759 consensus_9505#1 ATTAAGCCACAACCCAACACACTACGTCCACATCCATT--TCCATACCGCTCCGGTTTAT 881 consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 AGGTAATCGCTGGACACACAGCGGCTGTCACGGCCGTCCGTTGGGGAGGTTCCGGGCTGC 861 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 GTTAAATAAGATC--GAAATGAAATGATTTATTCCCAC--ATTTGAAAAAAACAAAAAAA 937 consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 TCTACACCTCGTCCCGCGATCGGACGGTCAAGATGTGGCGAGCGGAGGACGGCGTACTGT 921 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 AAAAAAAGGGCAAAT--------------------------------------------- 952 consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 GCAAAACGTTCACGGGTCACGCGCACTGGGTGAATAATTTGGCGCTCAACACGGACTACG 981 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 TGCTGCGGACGGGCCCGTTTCACCCGGTGATGGACAAATTTAAGATGTACGGGGACGGCG 1041 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 CGGATAAGGACGCCCTCAAGCAGCTGGCGCTCGAGCGGTACGAGCAGGTGTGCCCGGACG 1101 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 GGGTGGAATCGTTCGTCTCGTGTTCGGACGACTTTACGCTGTATCTGTGGCGCGCGAACC 1161 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 AGAAACAGTTCGTGACGCGCATGACCGGCCACCAGAATGTGGTGAACGATGTGAAGTACT 1221 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 CGCCGGACGTGAAGTTTATTGCGTCCGCTTCGTTCGACAAATCGATCCGGCTGTGGCGGG 1281 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 CCGGCGATGGGGCGTTCATTTGTGCCTTGCGCGGTCACGTGCAGGCCGTCTACACGGTGA 1341 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 GCTGGTCGGCCGATTCGCGGCTAGTGCTTAGCGGCAGCAAGGACTCAACCCTCAAGGTGT 1401 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 GGAGTGTGAAGGAGCGCAAGCTGGTGCAGGAGCTGCCCGGACACGCGGACGAAGTGTACG 1461 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 GCGTGGATTGGGCACCGGACGGTTCCCGCGTTGCTTCCGGTGGCAAAGATAAGGTGTTAA 1521 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 ------------------------------------------------------------ consensus_9505#3 ------------------------------------------------------------ consensus_9505#0 AACTGTGGGCATATTAAGCCACAACCAAACACATACGTCCACATCCATTTCCATACCGCT 1581 consensus_9505#2 ------------------------------------------------------------ consensus_9505#1 --------------------- consensus_9505#3 --------------------- consensus_9505#0 CGGGTTTATGTTAAATAAGAT 1602 consensus_9505#2 --------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||