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Anopheles gambiae
cluster # 9508 cluster # 9508       Sequences # 17       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9508#0 length = 1351 sequences # 16  
consensus_9508#1 length = 812 sequences # 1  

consensusID : consensus_9508#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 16
consensus length = 1351
fasta sequence
                              [CCGGTTTCGTTGCCGGCTAGTTGTATCGAAAAAGTT-CACAAACACGCTGCACAGCCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG-TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG-AAAAAAGCCACCCAACAGCGTGACTCCCGG-AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCG-GCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL BM600162             [CCGGTTTCGTTGCCGGCTAGTTGTATCGAAAAAGTTCCACAAACACGCTGCACAGCCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08XCB             [                           GAAAAAGTT CACAAACACGCTGCACAGCCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGCTAAAGTACGACCCGCA GAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGC ACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAAGCCACCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCG GCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGGCGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGA                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM606502             [                                    ccgCAAACACGCTGCACAGCCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM602619             [                                          ccgCGCTGCAC GGCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAACAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTTGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAAATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGTTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCGCCCAACAGCGTGACTCCCGGAAAGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX625116             [                                                       gCTCCCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAACAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTTGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAAATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGTTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACNAACACTGCGGCGGTTGAGATGCGCAANGCTTGCCTTGCG AAAAAAGCCGCCCAACAGCGTGACTCCCGG AAGGANGCGCGCCAGGAGCGGGAGAAGCANGAACGATGGGACCG GCTCGTGACGGAGCTGAAGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08MTY             [                                                           CCATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGCTAAAGTACGACCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM587991             [                                                                 ccgGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAACAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTTGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAAATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGTTGCAGCAGCTAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATGGAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCGCCCAACAGCGTGACTCCCGG AAGGAGGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX604049             [                                                                           GAAAAACAACCGAAAAAGGTTCTGTCCGAACAGGAACGGCTCGAACTGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTTGAGAAAAAGCGCTACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAAATGGCAAAGCATCCGTTCTTCATGCAAAAGTCGCCCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09DYT             [                                                                                                                                                                                                                                                                                                                                                                                         GCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGACAAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCATCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCGCCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCG GCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGTTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGTTGGCCCGTCGTTTTCTGCTATCCAGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTACCGTGCGAAGAAAGTGAGCGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGCACGCTCACATTCTACATCCTTGTGAAGGGATCCAAGCAGGAGGAATCGTTCATTACGCAAACTAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGTGGGTGAACAC AAATAATA                                            ]
[+] EMBL CNS09K4V             [                                                                                                                                                                                                                                                                                                                                                                                                  GTTCCGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCGTTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCACCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCG GCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATCGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CNS09LRE             [                                                                                                                                                                                                                                                                                                                                                                                                      CGCATGGCCGTGCTGAGCTACACGGAGGCATTGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCACCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGATGCAGGTACGATGGGACCG GCTCGTGACGGAGCTGTAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGTGTTTCCTCCGGCCACGGTTGGCAtc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09K4W             [                                                                                                                                                                                                                                                                                                                                                                                                                                          TACAAGGTGGGCGATGCGGCGTACAAAGCGATTTTTTACAACAACCGTAGCGCGGCCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAAATGCACAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGAAACTGCAACGCGACCCGACGAAAACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCACCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGCGCTCGTGACGGAGCTGAAAAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAA                                 ]
[+] EMBL BM596396             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCAGAAAGCGCTGGAGCTGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCG TTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCG AAAAAAGCCACCCAACAGCGTGACTCCCGG AAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCG GCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGG                                                                                                                                                          ]
[-] EMBL CNS09DYU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGTTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGTTGGCCCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS08MTZ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCG                                       ]
[-] EMBL CNS09LRF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTAATATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAACAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATtggtttc                                                                                                           ]


>consensus_9508#0 CCGGTTTCGTTGCCGGCTAGTTGTATCGAAAAAGTTCACAAACACGCTGCACAGCCTCCC ATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAAC TGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCT ACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCA TGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGC TAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATG GAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCAT TGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGG CCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGC TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATC GGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTG CGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCC GGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGC TGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCC GGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGA GCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTT TGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTG ACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCG GGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGT TCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGG AATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCT GGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATC GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_9508#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence
                              [TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTTCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCCGGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGGCGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAACAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATCGGATTCCACTTACCATACCATCATAAAAAAAA]

[-] EMBL CNS08XCC             [TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTTCGCTTCGGCGCTCGATCGGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTGCGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCCGGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGCTGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGGCGATGAGCGTTTCCTCCGGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGAGCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTTTGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTGACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCGGGTTGGCCTACTTGGTGGACAAGAACAAAACTATCCGGGAGATAGTGGCGGAAAGAACGTTCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGGAATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCTGGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATCGGATTCCACTTACCATACCATCATAAAAAAAA]


>consensus_9508#1 TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTTCGCTTCGGCGCTCGATC GGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTG CGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCC GGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGC TGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGGCGATGAGCGTTTCCTCC GGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGA GCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTT TGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTG ACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCG GGTTGGCCTACTTGGTGGACAAGAACAAAACTATCCGGGAGATAGTGGCGGAAAGAACGT TCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGG AATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCT GGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATC GGATTCCACTTACCATACCATCATAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9508#0      CCGGTTTCGTTGCCGGCTAGTTGTATCGAAAAAGTTCACAAACACGCTGCACAGCCTCCC 60
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      ATATCACGATGGAAGAAAAACAACCGAAAAAGGTTCTGTCCGAGCAGGAACGGCTCGAAC 120
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      TGGCGGCCCAGCTGGACAAGGATCTGGATGCGTTCATAAGCTCGCTGGAGAAAAAGCGCT 180
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      ACACCGAGGGATGGCCGGAAGACCGCTGGGAGGAGGAGATGGCAAAGCATCCGTTCTTCA 240
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      TGCAAAAGTCGCCCGAACCGGGCGAAGAGCTGTCCCCGCTGATGGAGGGGCTGCAGCAGC 300
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      TAAAGTACGACCCGCAGGAAAACACGGAACAGGAGCTGGCCGATACGTACAAAGAGGATG 360
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      GAAAGTTTTACATGCAGCACCGCAAGTTCCGCATGGCCGTGCTGAGCTACACGGAGGCAT 420
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      TGCGCTACAAGGTGGGCGATGCGGCGTACAAAGCGATTCTTTACAACAACCGTAGCGCGG 480
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      CCAACTACATGCTGAAAAACTACCGCACTTCCCTGCAAGATGCACAGAAAGCGCTGGAGC 540
consensus_9508#1      ------------------------------------------------------------
                                                                                  

consensus_9508#0      TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTGCGCTTCGGCGCTCGATC 600
consensus_9508#1      TGAACCCTGACTACGACAAGGCCCGATGGCGTGCGGCACAGTTCGCTTCGGCGCTCGATC 60
                      ****************************************** *****************

consensus_9508#0      GGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTG 660
consensus_9508#1      GGTTTGAGCTGTGCGTTGAGCTTTGCGACACGATACTGCAACGCGACCCGACGAACACTG 120
                      ************************************************************

consensus_9508#0      CGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCC 720
consensus_9508#1      CGGCGGTTGAGATGCGCAAGGCTTGCCTTGCGAAAAAAGCCACCCAACAGCGTGACTCCC 180
                      ************************************************************

consensus_9508#0      GGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGC 780
consensus_9508#1      GGAAGGAGGCGCGCCAGGAGCGGGAGAAGCAGGAACGATGGGACCGGCTCGTGACGGAGC 240
                      ************************************************************

consensus_9508#0      TGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGACGATGAGCGTTTCCTCC 840
consensus_9508#1      TGAAGAAGCGCATGGTAAAGTTCGAGGAGCGCAAAGCACTCGGCGATGAGCGTTTCCTCC 300
                      ****************************************** *****************

consensus_9508#0      GGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGA 900
consensus_9508#1      GGCCACGGTTGGCACCGCTGGAGGACTTTATGGTTTCGTGCGACGAGAACGGCGTCCTGA 360
                      ************************************************************

consensus_9508#0      GCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTT 960
consensus_9508#1      GCTGGCCCGTCGTTTTCTGCTATCCCGAATTTCAAACGACCGACTTTCAGCAGCAACTTT 420
                      ************************************************************

consensus_9508#0      TGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTG 1020
consensus_9508#1      TGGAAACCACTACCATGCAAGACGTACTGGAGCAACTGTTCGAGGAGCCGCTGGAGTGTG 480
                      ************************************************************

consensus_9508#0      ACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCG 1080
consensus_9508#1      ACAAGGCGGGACTGTATCGTGCGAAGAAAGTGAACGTTTACTATGAAAACAGGATACTCG 540
                      ************************************************************

consensus_9508#0      GGTTGGCCTACTTGGTGGACAAGAGCAAAACTATCCGGGAGATAGTGGCGGAAAGAACGT 1140
consensus_9508#1      GGTTGGCCTACTTGGTGGACAAGAACAAAACTATCCGGGAGATAGTGGCGGAAAGAACGT 600
                      ************************ ***********************************

consensus_9508#0      TCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGG 1200
consensus_9508#1      TCGTCGCGTTTCAAGGGACGCTCACATTTTACATCCTCGTGAAGGGATCGAAGCAGGAGG 660
                      ************************************************************

consensus_9508#0      AATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCT 1260
consensus_9508#1      AATCGTTCATTACGCAAACAAGGATACCGCTGAAAATAGAATACTAACAGGAAACATGCT 720
                      ************************************************************

consensus_9508#0      GGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATC 1320
consensus_9508#1      GGGAAACTTGTGTAAAGTGAGGAAAAGGGGGTGAACACAAAATAATAAATCGATAGAATC 780
                      ************************************************************

consensus_9508#0      GGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA- 1351
consensus_9508#1      GGATTCCACTTACCATACCATCATAAAAAAAA 812
                      ***    *   *  * *  *  * ******* 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)