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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9527#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 893 fasta sequence
[CCGCCCAC----CCGC-CCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCC-ACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC-G-GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG-AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCC-GGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTC-TCGGCCGTGATGGACATCTCGCCGTACAAATTTCAACCAACCGGGCGGCGACCCGAANCCCGACTTTGTGCACGTGGCACCGTGNCCANACGTGTACCGGGGCAAGTACCGCGACTGTGACTATCCGGACGGTACCGACCTG]
[+] EMBL BM592919 [CCGCCCAC GCGT CCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCCAACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGG GCAACCTGTCCGTCTGCTACT ]
[+] EMBL BM617861 [CCGCCCACGCGTCCGCGTCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCCAACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCC GGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTCTTCGGCCGTGATGGACATCTC CCGTA ]
[+] EMBL BM645920 [ CCGG TCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCCAACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCCGGGCACGAGGTG ]
[+] EMBL BM626929 [ C CGGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCC ACCCGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTTGTCAACTCCGGCTCGGAAGGCGA ]
[+] EMBL BM641990 [ ccgCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCC ACCCGAGTTGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTTGTCAACTCCGGCTCGG AGGCGAACGAT ]
[+] EMBL BM620549 [ GACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCC ACCCGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTTGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCC GGCA ]
[+] EMBL BM594691 [ cCGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCCAACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC GAGCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCG ]
[+] EMBL BX627852 [ CTTTGGCTGTCACCCCGGCTCACACCCTCC ACCCGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAATAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTTGTCAACTCCGGCTCGG ANGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGGC GGCACGANGTGATCACGCTCGACCATGCCTACCACGGTCACGTC TCGGNCGTGATGGACATCTCGCCGTACAAATTTCAACCAACCGGGCGGCGACCCGAANCCCGACTTTGTGCACGTGGCACCGTGNCCANACGTGTACCGGGGCAAGTACCGCGACTGTGACTATCCGGACGGTACCGACCTG]
[+] EMBL BM578052 [ ccgACACCCTCCAACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG AGG ]
[+] EMBL BM585823 [ CCGCA ACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCC GGCACGAGGTGATCACGCTCGACCATGCCTACCACG ]
[+] EMBL BM603492 [ CCGCA ACCAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G Gg ]
[+] EMBL BM623907 [ ccgcGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTTGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGC ]
[+] EMBL BM650887 [ GAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTTTGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTTTTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAAAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCATGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCA ]
[+] EMBL BX605317 [ AAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCTAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCC G GCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGG AGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCC GGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTC TCGGCCGTGATGGACATCTCGCCGTACAAA TTCAACCAACCGGGCGGCGACCCGAAGCCCGACTTTGTGCACGTGGCACCGTGCCCGGACGTGTACCGGGGCAAGTACCGC ]
consensusID : consensus_9527#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 661 fasta sequence
[CCGAGGATTACCCTTTTTTTGGCGCCATTTTTCCTGTTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGTGAAGATAGTGCGCGGCAGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTACGTACCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTACTGCATACTTCGTCAACTCCGGTCGGAGGCGAACGATCTGGCGCTAGCGGCTCGCCCGCAGCAACACCGGCCGGCACAGAAGGTGATCACAGCATCGACCAGTAANAGTATCCAAACGGCCCAGGAAGTCCGCAAGCTGCCTTAGAAAAAAGAAGAAGCAANAAAAAAACTTAGGTCGATGGATCAGGG]
[+] EMBL AL693715 [CCGAGGATTACCCTTTTTTTGGCGCCATTTTTCCTGTTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAAAAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACACCAGGTGACAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGTGAAGATAGTGCGCGGCAGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTACGTACCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTACTGCATACTTCGTCAACTCCGGTCGGAGGCGAACGATCTGGCGCTAGCGGCTCGCCCGCAGCAACACCGGCCGGCACAGAAGGTGATCACAGCATCGACCAGTAANAGTATCCAAACGGCCCAGGAAGTCCGCAAGCTGCCTTAGAAAAAAGAAGAAGCAANAAAAAAACTTAGGTCGATGGATCAGGG]
consensusID : consensus_9527#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 561 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGGAGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCCGGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTCTCGGCCGTGATGGACATCTCGCCGTACAAATTCAACCAACCGGGCGGCGACCCGAAGCCCGACTTTGTGCACGTGGCA]
[+] EMBL BM589715 [CCGCCCACGCGTCCGCCCACGCGTCCGAAGCGAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAACTGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGATAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGGAGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCCGGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTCTCGGCCGTGATGGACATCTCGCCGTACAAATTCAACCAACCGGGCGGCGACCCGAAGCCCGACTTTGTGCACGTGGCA]
[+] EMBL BX604047 [ AGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCATCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCCAGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTCGTCCAGTGCGCCCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTCTGCTACTTCGTCAACTCCGGCTCGGAGGCGAACGATCTGGCGCTGCGGCTCGCCCGCCAGCACACCGGCCGGCACGAGGTGATCACGCTCGACCATGCCTACCACGGTCACGTCTCGGCCGTGATGGACATC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9527#0 CCGCCCACCCGCCCGCGCAGAGACGCGCCTTTGGCTGTCACCCCGGCTCACACCCTCCAC 60
consensus_9527#2 ------------------------------------------------------------
consensus_9527#1 ------------------------------------------------------------
consensus_9527#0 CAGAGTGGCAGACGCGAGCTCGCACGCGGTCGCTGGTGTGCGTGTTGTGTGTTTGGTTTT 120
consensus_9527#2 ------------------------------------------------------------
consensus_9527#1 ------------------------------------------------------------
consensus_9527#0 TGTGCGTTACGTCGCTCAACAAAGCAACAGGGGTTAAAAAAAAGGAAAAGTTCCCCCTTT 180
consensus_9527#2 ------------------------------------------------------------
consensus_9527#1 --------------------------------------------CCGAGGATTACCCTTT 16
consensus_9527#0 TTTTGGCGCCATTTTTCCCTGTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAA 240
consensus_9527#2 ------------------------------------------------------------
consensus_9527#1 TTTTGGCGCCATTTTTCCTGTTGCACGTGTGTTATTGTGTGAGTGTGTGTACGAGCAGAA 76
consensus_9527#0 AAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACAC-CAGGTGACAAGC 299
consensus_9527#2 -----------------------------CCGCCCACGCGTCCGCCCACGCGTCCGAAGC 31
consensus_9527#1 AAAAAGCACCAGAAAGGGCTCCAAAGGGACCTCCTCGGGAACCACAC-CAGGTGACAAGC 135
** ** * ** * * * ** ****
consensus_9527#0 GAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAAC 359
consensus_9527#2 GAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAAC 91
consensus_9527#1 GAGACAGCCTCAACATGGTGGACGCGTGCGAAACGATGCCCAAAGCGGACACAATCAAAC 195
************************************************************
consensus_9527#0 TGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGA 419
consensus_9527#2 TGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCGCTGAAGA 151
consensus_9527#1 TGCGAAACAAACACATCGGCAAATCCTGCCAGCTGTTCTATCGCTCCGATCCG-TGAAGA 254
***************************************************** ******
consensus_9527#0 TAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCA 479
consensus_9527#2 TAGTGCGCGGCCAGGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCA 211
consensus_9527#1 TAGTGCGCGGC--AGGCCAGTACATGTACGACGAGCAGGGTGCACGGTACCTCGACTGCA 312
*********** **********************************************
consensus_9527#0 TCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCC 539
consensus_9527#2 TCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCC 271
consensus_9527#1 TCAACAACGTCGCGCACGTTGGACACTGCCATCCGAAGGTGGTGGAGGCCGGGACGCGCC 372
************************************************************
consensus_9527#0 AGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCT-CGT-CCAGTGCGC 597
consensus_9527#2 AGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCT-CGT-CCAGTGCGC 329
consensus_9527#1 AGCTGGCCACCCTGTCGACCAACAACCGCTTCCTGCACGACGAGCTACGTACCAGTGCGC 432
********************************************** *** *********
consensus_9527#0 CCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGT-CTGC-TACTTCGTCAACTCC 655
consensus_9527#2 CCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGT-CTGC-TACTTCGTCAACTCC 387
consensus_9527#1 CCAAACGCTCGCGGCAAAGATGCCCGGCAACCTGTCCGTACTGCATACTTCGTCAACTCC 492
*************************************** **** ***************
consensus_9527#0 GGCTCGGAGGCGAACGATCTGGCGCT-GCGGCTCGCCCGCCAGCACACCGGCCGGCACG- 713
consensus_9527#2 GGCTCGGAGGCGAACGATCTGGCGCT-GCGGCTCGCCCGCCAGCACACCGGCCGGCACG- 445
consensus_9527#1 GG-TCGGAGGCGAACGATCTGGCGCTAGCGGCTCGCCCGCAGCAACACCGGCCGGCACAG 551
** *********************** ************* **************
consensus_9527#0 -AGGTGATCACGC--TCGACCATGCCTACCACGGTCACGTCTCGGCCGTGATGGACATCT 770
consensus_9527#2 -AGGTGATCACGC--TCGACCATGCCTACCACGGTCACGTCTCGGCCGTGATGGACATCT 502
consensus_9527#1 AAGGTGATCACAGCATCGACCAGTAANAGTATCCAAACGGCCCAG--GAAGTCCGCAAGC 609
********** ******* * * *** * * * * * **
consensus_9527#0 CGCCGTACAAATTTCAACCAACCGGGCGGCGACCCGAANCC-CGACTTTGTGCACGTGGC 829
consensus_9527#2 CGCCGTACAAATT-CAACCAACCGGGCGGCGACCCGAAGCC-CGACTTTGTGCACGTGGC 560
consensus_9527#1 TGCCTTAGAAAAAAGAAGAAGCAANAAAAAAACTTAGGTCGATGGATCAGGG-------- 661
*** ** *** ** * * ** * * * * *
consensus_9527#0 ACCGTGNCCANACGTGTACCGGGGCAAGTACCGCGACTGTGACTATCCGGACGGTACCGA 889
consensus_9527#2 A----------------------------------------------------------- 561
consensus_9527#1 ------------------------------------------------------------
consensus_9527#0 CCTG 893
consensus_9527#2 ----
consensus_9527#1 ----
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||