cluster # 9531

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Anopheles gambiae
cluster # 9531 cluster # 9531 Sequences # 17 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9531#0 length = 1028 sequences # 13

consensus_9531#1 length = 704 sequences # 3
consensus_9531#2 length = 482 sequences # 1

consensusID : consensus_9531#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1028
fasta sequence

                              [GGATCAGTCCTAACGCGTAACGGTAGCGACAGGTCGCCGACAGACGATATATGGCTCAAGTACAGCGCCTCATTAGCAAACAGTTCGCTAGTGACTAGTGCCGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG-ATCGGTACCGGGTCGGGATGCTACT-CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAACCGTACGATGTCGATACCGGGT-GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGC-GA-TCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTTACACGGTGACGGAC-TTTAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCGACCGCTTTCAGCAAGAACGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACGATCGGCCAGCGGGTCGGTATGAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAAAATTGAGCGTACAGCGTGGCAGC--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTGCCCGGG]

[+] EMBL CNS09605             [GGATCAGTCCTAACGCGTAACGGTAGCGACAGGTCGCCGACAGACGATATATGGCTCAAGTACAGCGCCTCATTAGCAAACATTTCGCTAGTGACTAGTGCCGAAGAAGGAACAAGCATATTTAATCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM642763             [                                                             ccgGCGCCTCATTAGCAAACAGTTCGCTAGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCT         AATAAATAATGGTTGTGTACCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGCCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACACATTAAGCGCGGTTTGCGCCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGC GA TCGCGACCAGTTCGTCCAGATCGTGTGGGACAAC                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS09H5V             [                                                                      ctggAGCAAACAGTTCGTTAGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGCCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACTTGGAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGGT TCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTTACACGGTGACGGAC TTTAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCAACCGCTTTCAGCAAGAATGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACGATCGGCCAGCGGGTCGGTATGAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAAAATTGAGCTTACAGCGTGG  GC   AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGTGCCCGGG]
[+] EMBL CNS092TG             [                                                                                       CTAGT TTTAGTGCCGAAGAAGGAACAAGCATATTTAATCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGCGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAACAGAGCGCCAGA GT TCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTTACACGGTGACGGAC TTTAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCGACCGCTTTCAGCAAGAACGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACGATCGGCCAGCGGGTCGGTATGAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAAAATTGAGCGTACAGCGTGGCAGC  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATGT       ]
[+] EMBL BM641809             [                                                                                       ccgGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGCCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACTTGGAACCGTACGATGTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM607866             [                                                                                       ccgGTGACTAGTGCCGAAGAAGGAACAAGCATATTTAATCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTAATCAGCAACAGACGCAACGGGTTAATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACTCCGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAACCGTACGATGTCGATACCGGGTGGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGC GA TCGCGACCAGTTCGTTCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTGACACGGTGACGGACTTTTAGCGTGCAGTACGATTA                                                                                                                                                                                                                                        ]
[+] EMBL BM599763             [                                                                                                      ccgGAAGGAACAAGCATATTTAACCT         AATAAATAATGGTTGTGTACCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGCCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACACATTAAGCGCGGTTTGCGCCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGC GA TCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCG                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM631265             [                                                                                                      ccgGAAGGAACAAGCATATTTAACCT         AATAAATAATGGTTGTGTACCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGCCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACACATTAAGCGCGGTTTGCGCCAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS09PQJ             [                                                                                                                                    AAATAAATAAATAACGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGGCGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCAGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGCGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAACAGAGCGCCAGA GATTCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTGACACGGTGACGGAC TTTAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCGACCGCTTTCAGCAAGAACGGGGAG AAACGATCGT CCGAA GATCCGAACGCGACGATCGGCCAGCGGGTCGGTATGAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAAAATTGAGCGTACAGCGTGGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCAAGTt      ]
[+] EMBL CNS09LA5             [                                                                                                                                       TAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGCCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTGTATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGCGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAACAGAGCGCCACA GT GCGCGACCAGTTCGT                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS092TH             [                                                                                                                                                                                                                                                                                                                                                                                                           TGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATTGAAAATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTTTTTGAAGTTTTTTACGCGCACCGAGGAGCCGGATTACGTGCGTTTT ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09H5W             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCTGTTTGAAGTTTTTTACGCGCACCGAGGAGCCGGATTACGTGCGTGTG ATCGGTACCGGGTCGGGATGCTACT CGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTTACTTGGAACCGTACGATGTCGATACCGGGT GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGC GA TCGCGACCAGTTCGTCCAGATCGTGTGG                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09606             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GATTTTGGCAGCGTGATGCACTACAGCTCGACCCCTTTCAGAAAGAACGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACG                                                                                                                                                      ]




>consensus_9531#0
GGATCAGTCCTAACGCGTAACGGTAGCGACAGGTCGCCGACAGACGATATATGGCTCAAG
TACAGCGCCTCATTAGCAAACAGTTCGCTAGTGACTAGTGCCGAAGAAGGAACAAGCATA
TTTAACCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCT
TGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACT
CCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACAT
TGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGC
AACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAC
TCCGGAACAGATTGAACATATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTT
GAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGG
ATGCTACTCGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAACCGTACGA
TGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGG
GTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTGTGGGACAA
CATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTTACACGGTGACGGACTT
TAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCGACCGCTTTCAGCAAGAA
CGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACGATCGGCCAGCGGGTCGGTAT
GAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAAAATTGAGC
GTACAGCGTGGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCATG
TGCCCGGG

consensusID : consensus_9531#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 704
fasta sequence

                              [CGACCCACGCGTCCGAGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGATTGTGTTCCGTGGGTTGTTGTTGTTGATGCTTGCGGTGGTCTTTGTCCACGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATCGAACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGGATGCTACTCGTCCGTCGGCCACCGGGGTGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTGACACGGTGACGGAC]

[+] EMBL BM578260             [CGACCCACGCGTCCGAGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGATTGTGTTCCGTGGGTTGTTGTTGTTGATGCTTGCGGTGGTCTTTGTCCACGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATCGAACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGGATGCTACTCGTCCGTCGGCCACCGGGGTGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATC                                                      ]
[+] EMBL BM581168             [ GACCCACGCGTCCG GTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAAATAAATAAATAATGATTGTGTTCCGTGGGTTGTTGTTGTTGATGCTTGCGGTGGTCTTTGTCCACGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATCGAACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGGATGCTACTCGTCCGTCGGCCACCGGGGTGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTGACACGGTGACGGAC]
[-] EMBL CNS09PQK             [                                                                                                                                                                                                                                                                                                                                                                                    GCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTTTTACGCGCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGGATGCTACTCGTCCGTCGGTCACCGGGGCGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGAT                                                                                                                                                 ]




>consensus_9531#1
CGACCCACGCGTCCGAGTGACTAGTGCTGAAGAAGGAACAAGCATATTTAACCTAATAAA
ATAAATAAATAATGATTGTGTTCCGTGGGTTGTTGTTGTTGATGCTTGCGGTGGTCTTTG
TCCACGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGAC
CGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAG
AACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCT
GGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTACTCCGGAACAGATCG
AACACATTAAGCGCGGTTTGCGTCAGATCGAGTCCGTCACCTGTTTGAAGTTTGTAACGC
GCACCGAGGAGCCGGATTACGTGCGTGTGATCGGTACCGGGTCGGGATGCTACTCGTCCG
TCGGCCACCGGGGTGGTGCGCAAACGCTTAACCTGCAACCGTACGATGTCGATACCGGGT
GCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCATGCGGTTGGGTTCTACCATCAGC
AGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTGTGGGACAACATCGAGGATGGCA
AGGAGCACAACTTTAACATCTACGACAGTGACACGGTGACGGAC

consensusID : consensus_9531#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 482
fasta sequence

                              [AGGCAAGAATCGGCACGNGGAGCATATTTAACCCAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCTCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCAGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAGTAAGTAGCCCGGGGCTTGTGATATTAAAGTACGGAAATATTCTCTTTACCATGCTTCTCACCTTTGCTTANGTGTAACAGCTCCGGAACAGATTGAACATATTAAGCGCGGTTGCGTCAGATCGAGTCCGNTCACCTGTTTGAAGTTNGTANCGCG]

[+] EMBL BX467130             [AGGCAAGAATCGGCACGNGGAGCATATTTAACCCAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCTCTCCTAAGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCAGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAGTAAGTAGCCCGGGGCTTGTGATATTAAAGTACGGAAATATTCTCTTTACCATGCTTCTCACCTTTGCTTANGTGTAACAGCTCCGGAACAGATTGAACATATTAAGCGCGGTTGCGTCAGATCGAGTCCGNTCACCTGTTTGAAGTTNGTANCGCG]




>consensus_9531#2
AGGCAAGAATCGGCACGNGGAGCATATTTAACCCAATAAAATAAATAAATAATGGTTGTG
TTCCGTGGGTTGTTGTTGTTGGTGCTTGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAA
AATACACCAGAAAATGCGGCACGACTCCGGAACCTGCGACCGGACGAGCTGGCCGAGGAG
CTTAGCGGGCAGTTTGAAGGTGACATTGTGTTGAGCGAAGAACAGGAACGATCTCTCCTA
AGCAACAGACGCAACGGGTTGATTGCAACGACCTACCGCTGGCCAGGTAATACCGTGCCG
GTGATGATCGTCGAGGAGGACTTTAGTAAGTAGCCCGGGGCTTGTGATATTAAAGTACGG
AAATATTCTCTTTACCATGCTTCTCACCTTTGCTTANGTGTAACAGCTCCGGAACAGATT
GAACATATTAAGCGCGGTTGCGTCAGATCGAGTCCGNTCACCTGTTTGAAGTTNGTANCG
CG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9531#0      GGATCAGTCCTAACGCGTAACGGTAGCGACAGGTCGCCGACAGACGATATATGGCTCAAG 60
consensus_9531#1      ------------------------------------------------------------
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      TACAGCGCCTCATTAGCAAACAGTTCGCTAGTGACTAGTGCCGAAGAAGGAACAAGCATA 120
consensus_9531#1      -------------CGACCCACGCGTC-CGAGTGACTAGTGCTGAAGAAGGAACAAGCATA 46
consensus_9531#2      -------------------------------AGGCAAGAATCGGCACGNGGA---GCATA 26
                                                      * * **    *      * *   *****

consensus_9531#0      TTTAACCTAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCT 180
consensus_9531#1      TTTAACCTAATAAAATAAATAAATAATGATTGTGTTCCGTGGGTTGTTGTTGTTGATGCT 106
consensus_9531#2      TTTAACCCAATAAAATAAATAAATAATGGTTGTGTTCCGTGGGTTGTTGTTGTTGGTGCT 86
                      ******* ******************** ************************** ****

consensus_9531#0      TGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACT 240
consensus_9531#1      TGCGGTGGTCTTTGTCCACGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACT 166
consensus_9531#2      TGCGGTGGTCTTTGTCCAGGCAGGAGTGATTAAAAATACACCAGAAAATGCGGCACGACT 146
                      ****************** *****************************************

consensus_9531#0      CCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACAT 300
consensus_9531#1      CCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACAT 226
consensus_9531#2      CCGGAACCTGCGACCGGACGAGCTGGCCGAGGAGCTTAGCGGGCAGTTTGAAGGTGACAT 206
                      ************************************************************

consensus_9531#0      TGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGC 360
consensus_9531#1      TGTGTTGAGCGAAGAACAGGAACGATCGCTCCTAAGCAACAGACGCAACGGGTTGATTGC 286
consensus_9531#2      TGTGTTGAGCGAAGAACAGGAACGATCTCTCCTAAGCAACAGACGCAACGGGTTGATTGC 266
                      *************************** ********************************

consensus_9531#0      AACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAC 420
consensus_9531#1      AACGACCTACCGCTGGCCGGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAC 346
consensus_9531#2      AACGACCTACCGCTGGCCAGGTAATACCGTGCCGGTGATGATCGTCGAGGAGGACTTTAG 326
                      ****************** **************************************** 

consensus_9531#0      TCCGGAAC---AGATTGAACATATTAA-GCGCGG---TTTGCGTCAGATCGAGTCCGTCA 473
consensus_9531#1      TCCGGAAC---AGATCGAACACATTAA-GCGCGG---TTTGCGTCAGATCGAGTCCGTCA 399
consensus_9531#2      TAAGTAGCCCGGGGCTTGTGATATTAAAGTACGGAAATATTCTCTTTACCATGCTTCTCA 386
                      *  * * *    *       * ***** *  ***   * * *     * *  *    ***

consensus_9531#0      CCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGT-GCGTGTGATCGGTACC 532
consensus_9531#1      CCTGTTTGAAGTTTGTAACGCGCACCGAGGAGCCGGATTACGT-GCGTGTGATCGGTACC 458
consensus_9531#2      CCT-TTGCTTANGTGTAACAGCTCCGGAACAGATTGAACATATTAAGCGCGGTTG-CGTC 444
                      *** **       ******     * **  **   **  *  *   * * * * *    *

consensus_9531#0      GGGTCGGGATGCTACTCGTCCGTCGGTCACCGGGGTGGTGCGCAAACGCTTAACCTGGAA 592
consensus_9531#1      GGGTCGGGATGCTACTCGTCCGTCGGCCACCGGGGTGGTGCGCAAACGCTTAACCTGCAA 518
consensus_9531#2      AGATCGAG--TCCGNTCACCTGTTTGAAGTTNGTANCGCG-------------------- 482
                       * *** *   *   **  * **  *      *    * *                    

consensus_9531#0      CCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCAT 652
consensus_9531#1      CCGTACGATGTCGATACCGGGTGCTTCCGGTTGGCCACGATCGTGCACGAGTTTATCCAT 578
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      GCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTG 712
consensus_9531#1      GCGGTTGGGTTCTACCATCAGCAGAGCGCCAGCGATCGCGACCAGTTCGTCCAGATCGTG 638
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      TGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTTACACGGTG 772
consensus_9531#1      TGGGACAACATCGAGGATGGCAAGGAGCACAACTTTAACATCTACGACAGTGACACGGTG 698
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      ACGGACTTTAGCGTGCAGTACGATTATGGCAGCGTGATGCACTACAGCTCGACCGCTTTC 832
consensus_9531#1      ACGGAC------------------------------------------------------ 704
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      AGCAAGAACGGGGAGAAAACGATCGTCCCGAAGGATCCGAACGCGACGATCGGCCAGCGG 892
consensus_9531#1      ------------------------------------------------------------
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      GTCGGTATGAGCGAGCGGGACATCTCCAAACTGAACCACATGTACAAGTGTTTGAATAAA 952
consensus_9531#1      ------------------------------------------------------------
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      AATTGAGCGTACAGCGTGGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG 1012
consensus_9531#1      ------------------------------------------------------------
consensus_9531#2      ------------------------------------------------------------
                                                                                  

consensus_9531#0      GCCCCATGTGCCCGGG 1028
consensus_9531#1      ----------------
consensus_9531#2      ----------------