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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9533#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1303 fasta sequence
[TTTTTGCCCTCCCCCCCGCACACTTCTGCAGCTGAGCAAGCAACAAACGATTCGCCACCTATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG---CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC-TGTTG-ATC-GGC--TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT-GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC-TGTTTGCGGACGCTGATGGAGCGA-CCAAGTTT-GC-CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT-GCTCGTG-TGGACGTTCGC-GGTGAAGAAGATACGCGATACGCA-GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG-C-CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAG-TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA-CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAAGTTTAACAAAAAAT-CATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGTTTTTCTGCACACGCGAACGGTCAGAAGCAGCAAACGCGTGGGCC]
[+] EMBL CNS098G9 [TTTTTGCCCTCCCCCCCGCACACTTCTGCAGCTGAGCAAGCAACAAACGATTCGCCACCTATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACG ATGGGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGAT ]
[+] EMBL CNS09KGW [ ataaaaaaCGCAAACTTCTGCAGCTGAGCAAGCAACAAACGATTCGCCACCTATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACG ATGGGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACTT GCTCGTG TGGACGTTCGC AGTGAAGAAGATACGGGATACGCA TGCGGGTTTAAGCTGGTGACGCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGG ]
[+] EMBL CNS08QD4 [ ACTTCTGCAGCTGAGC AGCAAC AACGATTCGCCACCTATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTAC CAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGCTTGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCATGTG GGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGGTCGAGGAGGTGGCCGTGA ]
[+] EMBL CNS08WZJ [ AGCTGAGCAAGCAACAAACGATTCGCCACCTATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTA CAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCG ]
[+] EMBL BM654998 [ ccgCGATTCGCCACCTATATATCAGGAGTTTATCGCGTATCGGGTGTGCCGCTAGTAGGAAAGAATGCAACGCTAAATTGTACAATTAGTAAAAAATAAGGTGCTTCTTCTATCCGCAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTGTGTTTTTCCTCTTCGTGGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCTTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCATGGGGAATGCTTAGCAGTCG ]
[+] EMBL CNS08NAA [ ATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAAATTGTACAATCAGTAAAACATAAGGTG CTTCTATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCAC TGTTG ATC GGC TCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGCAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGT ]
[+] EMBL CF542016 [ ATCCGGAACAATGTTGACCACCGAGTTTGTCCAGCTGGCACTTGTAGCATCAGGCAGNACGGATCTATATTTTTCCTCTTCGTTGTGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGANACGCGATGCGCTCGCGATCGGTNCCCGTGCCCATCTGGAGGAGGAAGCGACNGNCCAGCGTACCTTCTNNCGCACGATACTGATGCACGGATTTCACNTNNCTCGTGNTGNACGTTCGCAGNTGAAGAAGATACnngnanacg ]
[-] EMBL CNS08QD5 [ GGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAAGTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGGTCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAG TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA GGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAAGTTTAACAAAAAATGCATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGTTTTTCTGCACACGCGAACGGTCAGAAGCAGCAAACGCGTGGGCC]
[+] EMBL BX608102 [ cgTCGCTGGAGGACTAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAA ]
[-] EMBL CNS08NAB [ GAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAAGTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAAC CGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAG TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAAGTTTAACAAAAAAT CATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGTTTTTCTGCACACGCGAACGGTCAGAAGCAGCt ]
[-] EMBL CNS09KGX [ GACTTAACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAAGTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAAC CGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTAACTT GCTCGTG TGGACGTTCGC AGTGAAGAAGATACGGGATACGCA GTGCGGGTTTAAGCTGGTGACGCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCGACACCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAG TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAGGTTTAACAAAAAAT CATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGCTTTTCTGCACACGCGAACGGTCAGAAGCAGCAAACac ]
[+] EMBL BX616196 [ ATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAGCTGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCCGTACGCGATCGGTGCGTGGCAGCTGCGCA ]
[-] EMBL CNS098GA [ TGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCAT GGGAATGCTTAGCAGCCGTGGCCAGTTTCTGC TGTTTGCGGACGCTGATGGAGCGA CCAAGTTT GC CGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGGGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTTACTT GCTCGTG TGGACGTTCGC AGTGAAGAAGATACGGGATACGCA GTGCGGGTTTAAGCTGGTGACGCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGGGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAC TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAGGTTTAACAAAAAAT CATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGCTTTTCTGCACACGCGAACGGGCAGA ]
[-] EMBL CNS08WZK [ ATGGAGCGAGCCAAGTTTGGCGCGATTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACAT GCTCGTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAC TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTTTAGGTATAAGTTTAACAAAAAAT CATTTTCTCTTATGATTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGTTTTTCTGCACACGCGAACGGTCAGAA ]
[-] EMBL CNS08QXD [ GTG TGGACGTTCGC GGTGAAGAAGATACGCGATACGCA GTGTGGGTTTAAGCTGGTGACTCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCG C CCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTGGACGGAGATTGAGGGTTCGAAC TGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGATTTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCA CTGCGCAAGGAGCACTCGAATTGAGCGCGTGGATGAATGTT ]
consensusID : consensus_9533#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 646 fasta sequence
[CCGGCAGCGTCATGGTCACCTGGAAACGTGAAAATAATCGTTTCGTTTTTGTCATTCTTCTAGTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGACGCTGATGGAGCGACCAAGTTTGCCGACTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAATGGAAAAGCGACGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACATGCTCGTGTGGACGTTCGCGGTGAAGAAGATACGGGATACGCAGTGCGGGTTTAAGCTGGTGACGCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCGCCCAGTCGTACAACAT]
[+] EMBL BM613689 [CCGGCAGCGTCATGGTCACCTGGAAACGTGAAAATAATCGTTTCGTTTTTGTCATTCTTCTAGTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGACGCTGATGGAGCGACCAAGTTTGCCGACTATGGCAAACTGGAACGCAGCATGATGGAGCTGAGCGGATCGGAATGGAAAAGCGACGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGAGGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACATGCTCGTGTGGACGTTCGCGGTGAAGAAGATACGGGATACGCAGTGCGGGTTTAAGCTGGTGACGCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGTGGAGCTGCTGTTCATCGCCCAGTCGTACAACAT]
consensusID : consensus_9533#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 467 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCAGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCTTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGACGCTGATGGAGC]
[+] EMBL BM599205 [CCGCGGACGCGTGGGCGGACGCGTGGGCAGCTAGGAATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAGTACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTACCCGCTTTTGACGAGGAAAAAAGACTGCCAATCATGCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTACGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTACGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAAGGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGACGCTGATGGAGC]
[+] EMBL CNS08QXC [ GTACTACAAAGATCCCAGCACCGGTGACAA CGACCGTTCCCATCGCTGGAGGACGAACCCACGCTGAAGCTGAGTGTGATCGTAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9533#0 TTTTTGCCCTCCCCCCCGCACACTTCTGCAGCTGAGCAAGCAACAAACGATTCGCCACCT 60
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 ATATATCAGGAGTTTATCGCGTTTCGGGTGTGCCGCCAGTAGGAAAGAATGCAACGCTAA 120
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 ATTGTACAATCAGTAAAACATAAGGTGCTTCTATCCGGAACAATGTTGACCACCGAGTTT 180
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 GTCCAGCTGGCACTGTTGATCGGCTCCGGATCTATATTTTTCCTCTTCGTTGTGCTAGGA 240
consensus_9533#2 -----------------------CCGCGGACGCGTGGGCGGACGCGTGGGCA-GCTAGGA 36
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 ATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAG 300
consensus_9533#2 ATTGTGCTAAAGATTACGACCACAGCGTTCCCAAAAATTGTACGCTTCAAGGATGAGCAG 96
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 TACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCC 360
consensus_9533#2 TACTACAAAGATCCCAGCACCGGTGACAACCGACCGTTCCCATCGCTGGAGGACGAACCC 156
consensus_9533#1 ------------------------------------------CCGGCAGCGT-CATGGTC 17
** * * * *
consensus_9533#0 ACGCTGAAGC-TGAGTGTGATCGTACCCGCCTTTGACGAGGAAAAAAGACTGCCAATCAT 419
consensus_9533#2 ACGCTGAAGC-TGAGTGTGATCGTACCCGCTTTTGACGAGGAAAAAAGACTGCCAATCAT 215
consensus_9533#1 ACCTGGAAACGTGAAAATAATCGT-TTCGTTTTTGTCATTCTTCTAG---TGCCAATCAT 73
** *** * *** * ***** ** **** * * **********
consensus_9533#0 GCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTA 479
consensus_9533#2 GCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTA 275
consensus_9533#1 GCTGGATGAATGCATGGAATATCTGGAGGCGCGTGCCCGCAAGGAGAAAGACTTCACGTA 133
************************************************************
consensus_9533#0 CGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGAACGGTGGACGTTGCGATGAAGTA 539
consensus_9533#2 CGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTA 335
consensus_9533#1 CGAGGTGATTATCGTGAGCGACGGTAGCCGCGATCGGACGGTGGACGTTGCGATGAAGTA 193
************************************ ***********************
consensus_9533#0 CGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAA 599
consensus_9533#2 CGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAA 395
consensus_9533#1 CGTGGAAAAGTATGGCGTAGAGAAGCTGCGCGTGCTGGCCCTGGTACAAAACCGCGGCAA 253
************************************************************
consensus_9533#0 GGGTGGTGCGGTACGCATGGGAATGCTTAGCAGCCGTGGCCAGTTTCTGCTGTTTGCGGA 659
consensus_9533#2 GGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGA 455
consensus_9533#1 GGGTGGTGCGGTACGCATGGGAATGCTTAGCAGTCGTGGCCAGTTTCTGCTGTTTGCGGA 313
********************************* **************************
consensus_9533#0 CGCTGATGGAGCGACCAAGTTTGCCGATTATGGCAAACTGGAACGCAGCATGATGGAGCT 719
consensus_9533#2 CGCTGATGGAGC------------------------------------------------ 467
consensus_9533#1 CGCTGATGGAGCGACCAAGTTTGCCGACTATGGCAAACTGGAACGCAGCATGATGGAGCT 373
************
consensus_9533#0 GAGCGGATCGGAGTGGAAACGCGATGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGA 779
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 GAGCGGATCGGAATGGAAAAGCGACGCGCTCGCGATCGGTTCCCGTGCCCATCTGGAGGA 433
consensus_9533#0 GGAAGCTACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACATGCT 839
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 GGAAGCGACGGCCCAGCGTACCTTCTTCCGCACGATACTGATGCACGGATTTCACATGCT 493
consensus_9533#0 CGTGTGGACGTTCGCGGTGAAGAAGATACGCGATACGCAGTGTGGGTTTAAGCTGGTGAC 899
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 CGTGTGGACGTTCGCGGTGAAGAAGATACGGGATACGCAGTGCGGGTTTAAGCTGGTGAC 553
consensus_9533#0 TCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGT 959
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 GCGGTCCGCCGCCCGCAAGCTGTTCCAGGTGATGCACGTGGAGCGGTGGGCGTTCGATGT 613
consensus_9533#0 GGAGCTGCTGTTCATCGCCCAGTCGTACAACATTCCGATCGAGGAGGTGGCCGTGAACTG 1019
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 GGAGCTGCTGTTCATCGCCCAGTCGTACAACAT--------------------------- 646
consensus_9533#0 GACGGAGATTGAGGGTTCGAAGTGACGCCGTTCTGGTCGTGGCTGCAGATGGGGCGGGAT 1079
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 TTGATGCTGATCTGGTTCCGGTACGCGATCGGTGCGTGGCACTGCGCAAGGAGCACTCGA 1139
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 ATTGAGCGCGTGGATGAATGTTTAGGTATAAGTTTAACAAAAAATCATTTTCTCTTATGA 1199
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 TTTAGTTAGAATAGAGGTACAAATAATCGGATAAAATAAAAGCAAGCGGTATTTTGTGGT 1259
consensus_9533#2 ------------------------------------------------------------
consensus_9533#1 ------------------------------------------------------------
consensus_9533#0 TTTTCTGCACACGCGAACGGTCAGAAGCAGCAAACGCGTGGGCC 1303
consensus_9533#2 --------------------------------------------
consensus_9533#1 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||