These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9534#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1123 fasta sequence [CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA-G-ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC-A-TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG-TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC-TCA-AGGGGC-TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG-ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC-TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCAATATGAAA] [+] EMBL CNS09OXZ [CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTTTCGCA TGAAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAA ] [+] EMBL CNS09D3U [ cTTTACCTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACG CAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAA ] [+] EMBL CNS09Q3C [ TTCCTTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCACAGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACATGAAGAAGCAGGGCATCCGGTCGATG ] [+] EMBL CNS08K4X [ tgtaGTCTGCATTTGCCACTGGTGCTGCAG GTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA GAACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCCCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG A ] [+] EMBL BM597923 [ ccgCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCTGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATCTTCA AGGGGCTTGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGG ] [+] EMBL CNS09OTY [ TGGATTTG CGGTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCA TGAAACGCGGTGCAGGAAA AAAACAGAACAATTGATGGGCAGGGGATGGGTTA ] [+] EMBL CNS09KW7 [ CGGATAGAAATTTTATCATAATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAA G ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTACAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCA TGAAACGCGG ] [+] EMBL BX620888 [ TCTCTAGTCCAAAGACATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAAC ] [-] EMBL CNS09OY0 [ CATACGCACCGCCCAAAAAAAGATCCCGAACTGTTGCGCGATCGAGAGGCCTTCAAACGGCGGGCGAT GCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGTGACGATC ATTCCG TAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCA ] [-] EMBL CNS09KW8 [ GCCCCACGATGGATCCCGAACTGTTGCGCGAACGAGAGGCCTTCAAACGGCGGGCGATGGCAACGCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTTAAGAACATGCGCACCCGCCATCAGGAAGGTGACGATCAA TCC CTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACG TGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAAC ] [-] EMBL CNS09OTZ [ GCCAACCGTTGAGAAGAAGGCAAAAACGGAAAGCTCGTTTGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGAACATGCGCACCCGCCATCAGGAAGGTGACGATCAA TCC CTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATAAAAACAATTATACTGCAATATGAAA] [+] EMBL BX617372 [ TGCCGCACCGAAGG ACATCAAGAAGCCAAGGCCCGCCAGTGCCGCACCGAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTGAAGCACATGCGCACCCGCCATCAGGAAGGCGATGATC A TCCGCTAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCTGATCGTCCGTGAAAACGTGGCTCCAAGGGTAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTG TTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGA ] [-] EMBL CNS09Q3D [ GAAGATCGATGCCTCCAATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTTAAGGACATGCGCACCCGCCATCAGGAAGGTGACGATC AGTCCG TAACGCTGGACGAAATCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGTACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGTTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACG TGACGCAGTCGAACGCGGTGCGGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAAAAAgg ] [-] EMBL CNS09D3V [ TGAAGCAGCACGATC TCA AGGGGC TGGGCGGGGTGCTGCTGGACGATGTGCAGGAAT GCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTTTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAAT ] [+] EMBL BX612451 [ ACGATC TCA AGGGGC TGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACG ACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATA ] [-] EMBL CNS08K4Y [ CCATGGTCGATGCGAAGATCGACGAGTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGACGTACGAGGACAACAC CTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACC TTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGgactgt ] consensusID : consensus_9534#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence [CAGAATTGCCCGATGGTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGGCGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCCTGCACCGAAGTGTACATCNAAGTATAGCCAATGTGCGCCTGCGATGCTGCCTGCACCTGCAAGTATCTGATGCCTCCAAGTTTACATAAGACTATGTCCTGTGTAGCTCCCAGTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGGAGATGGCTAACACAACTTGGCCTGGACCTAACACCCCTGGCCCGTAAATTCCATGGTGACATGGTGGGTTAGAACGGGAGATTACCCAATTTCCCCTGGNCTNTTTTATAACCTGGCACTTTGTGGGCAATCNCTGGCACAATGAATTCCCCCCTTTGCNGGAACCCTGGAAGGGAAAAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTTTNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCGGGGGAAACGACTTTATCCCATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCGAGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTCGAGGTGCGGGGCATACATAAAAAGGGTGACNCCGGTGGACCCACCCGATTGGACTAGCACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCGCCCGCAAACAGAAAACGAA] [+] EMBL AL934629 [CAGAATTGCCCGATGGTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGGCGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCCTGCACCGAAGTGTACATCNAAGTATAGCCAATGTGCGCCTGCGATGCTGCCTGCACCTGCAAGTATCTGATGCCTCCAAGTTTACATAAGACTATGTCCTGTGTAGCTCCCAGTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGGAGATGGCTAACACAACTTGGCCTGGACCTAACACCCCTGGCCCGTAAATTCCATGGTGACATGGTGGGTTAGAACGGGAGATTACCCAATTTCCCCTGGNCTNTTTTATAACCTGGCACTTTGTGGGCAATCNCTGGCACAATGAATTCCCCCCTTTGCNGGAACCCTGGAAGGGAAAAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTTTNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCGGGGGAAACGACTTTATCCCATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCGAGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTCGAGGTGCGGGGCATACATAAAAAGGGTGACNCCGGTGGACCCACCCGATTGGACTAGCACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCGCCCGCAAACAGAAAACGAA] consensusID : consensus_9534#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 723 fasta sequence [TTGAGTTTCTGCCCGTAAACAAAACATTCACACAATTTCCCTTATTTATTTGACCTACCTCTATTGCTTTCAAACAGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCAAGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT] [+] EMBL BX613225 [TTGAGTTTCTGCCCGTAAACAAAACATTCACACAATTTCCCTTATTTATTTGACCTACCTCTATTGCTTTCAAACAGTGGCTCCAAGGGGAAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGTCGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCAAGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGGTGCTGAAAAATCGAGCATCGGAAATCATCTTCATTACGCGCCCGAACGACAAGAAGAAGATCCTGTTCTACAACGACCGGACGGCCAACTTCCAGGTGGACGAGGATTTCCAGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACCTGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGAAGCGGAAGAAGCTGGCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACATTTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAGGAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTATAAACTAGATAAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9534#0 CTTTGTTTACGTCTGCATTTGCCACTGGTGCTGCAGCGTTCGGATAGAAATTTTATCATA 60 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 ------------------------------------------------------------ consensus_9534#0 ATCAACGAATTAAAAGTGTGATACATTCCTGAACCATCCGTAATTCTCTAGTCCAAAGAC 120 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 ---------------------------------------------CAGAATTGCCCGATG 15 consensus_9534#0 ATACGCACCGCCCCACGATGGATCCCGCACTGTTGCGCGAACGAGAG-GCCTTCAAACGG 179 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 GTTAGCACCGCCCCACGATGGATCCCGCTCTGTTGCGCGAACGAGAGTGCCTTCAAAAGG 75 consensus_9534#0 CGGGCGATG-GCAACGCCAACC-GTTGAGAAGAAG-GCAAAAACGGAAAGCTCGTTTGCC 236 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 CGGGCGATGTGCAACGCCAACCTGTTGAGAAGAAGTGCAAAAACGGAAAGCTCGTTTGCC 135 consensus_9534#0 -GCACCGAAGACATCAAGAAGCCAAGGCCCGCGAGTGCCGCACCGAAGATCGATGCCTCC 295 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 TGCACCGAAGTGTACATCNAAGTATAGCCAATG-----TGCGCCTGCGAT-GCTGCCTGC 189 consensus_9534#0 AATTACAAAACTATGTCCGGTAGCTCCCAGTATCGCTTCGGTGTGCTGGCAAAGATCGTG 355 consensus_9534#2 ------------------------------------------------------------ consensus_9534#1 ACCTGCAAG----TATCTGATGCCTCCAAGTTT-------ACATAAGACTATGTCCTGTG 238 consensus_9534#0 AAGCACATGCGCACCCGCCATCAG--GAAGGTGACGATCATCCGCTAACGCTGGACGAAA 413 consensus_9534#2 -----------------------T--TGAGTTTCTGCCCGTAAACAAAACATTCACACAA 35 consensus_9534#1 TAGCTCCCA-GTATCCGCTATCGGCTGTTAGTATTGGCAAAACACTGGAGTTCCGGTAGG 297 * * * * consensus_9534#0 TCCTGGACGAGACCAACCAGCTCGATATCGGATCGTCCGTGAAAACGTGGCTCCAAGGGG 473 consensus_9534#2 TTTC---CCTTATTTATTTGACCTACCTCT-ATTG-CTTTCAAACAGTGGCTCCAAGGGG 90 consensus_9534#1 AGATGG-CTAACACAACTTGGCCTGGACCT-AACACCCCTGGCCCGTAAATTCCATGGTG 355 * * * * * * * * **** ** * consensus_9534#0 AAGCGCTGCGAAACAATCCAAAGATCGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGT 533 consensus_9534#2 AAGCGCTGCGAAACAATCCAAAGATTGAAGTGACGCCCGATGGCCGGTTTCTGTTCAAGT 150 consensus_9534#1 ACATGGTGGGTTAGAA-CGGGAGATT-ACCCAATTTCCCCTGGNCTNTTT---TATAACC 410 * * ** * * ** * **** * * ** *** * *** * ** consensus_9534#0 CGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGGCTGCTGAAGCAGCACGATCTCA 593 consensus_9534#2 CGGTGTTTAAAATCAAAGACGGCAAAAGCCTGATGCGCCTGCTGAAGCAGCACGATCTCA 210 consensus_9534#1 TGGCACTTTG---------TGGGCAATCNCTGGCACAA----TGAATTCCCCCCTTTGCN 457 ** ** ** ** *** * **** * * * * consensus_9534#0 AGGGGCTGGGCGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGG 653 consensus_9534#2 AGGGGCTGGGTGGGGTGCTGCTGGACGATGTGCAGGAATCGCTGCCGCACTGTGATAAGG 270 consensus_9534#1 GGAACCCTGGAAGGGAA-----AAACGATCCGAAAAAATCCGCCCCGAATAGGGGCCGTT 512 * * ** *** ***** * * **** *** * * * consensus_9534#0 TGCTGAAA--AATCGAGCATCGG-AAATCATCTTCATTACGCGCCCGAACGACAAGAA-- 708 consensus_9534#2 TGCTGAAA--AATCGAGCATCGG-AAATCATCTTCATTACGCGCCCGAACGACAAGAA-- 325 consensus_9534#1 TNCCCGNGCGGAAGCAGCATTAATAAGTTNTCCCCGCGGCG-GGGGAAACGACTTTATCC 571 * * * ***** ** * ** * ** * ****** * consensus_9534#0 ---GAAGATCCTGTTCTACAACGACCGGACGGC-CAACTTCCAGGTGGACGAGGATTTCC 764 consensus_9534#2 ---GAAGATCCTGTTCTACAACGACCGGACGGC-CAACTTCCAGGTGGACGAGGATTTCC 381 consensus_9534#1 CATGGAGGCTCCGTGCCGCACGGCGGCGTTAGTGTAAGAGCTAACTGAACAGAGAACCCG 631 * ** * ** * ** * * * ** * * ** ** ** * consensus_9534#0 AGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGAGTACC 824 consensus_9534#2 AGAAGCTGTGGCGCGCGGTAACGGTGGACGCCATGGACGATGCGAAGATCGACGATTACC 441 consensus_9534#1 AGGGGCATTAGTGCNGGGTGCCAGCTTACCCTCCGCCCGACTAAAAAAGAGTCGAGGGTC 691 ** ** * * ** *** * * ** * * *** ** * * *** * consensus_9534#0 TGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGA 884 consensus_9534#2 TGGAGAAGCAGGGCATCCGGTCGATGCAGGACCATGGGCCGAAGAAGCCGCTGCTGCCGA 501 consensus_9534#1 --GAGGTGCGGGGCATACATAAAAAGGGTGACNCCGG-TGGACCCACCCGATTGGACTAG 748 *** ** ****** * * * *** ** ** * *** * * consensus_9534#0 AGCGGAAGAAGCTG-GCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACAT 943 consensus_9534#2 AGCGGAAGAAGCTG-GCCAACAAGAAGCGCCAGTTCAAGAAGCCGCGCGACAACGAACAT 560 consensus_9534#1 CACGTAGGCTACAACAATACCAANAAGCGACCGATCAGAAAATAATGCAGTGTCG----- 803 ** * * * * *** ***** * * *** ** ** ** consensus_9534#0 TTGGCCGACGTGCTGGAGACGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAG 1003 consensus_9534#2 TTGGCCGACGTGCTGGAGATGTACGAGGACAACACGCTGACGCAGTCGAACGCGGTGCAG 620 consensus_9534#1 ----CCCGCAAACAGAAAACGAA------------------------------------- 822 ** * * * * * * * consensus_9534#0 GAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTTTATAAACTAGAT 1063 consensus_9534#2 GAAATCAAGCAGAACAATTGATGGGCAGGGGATGGGTTACCTTTTTTT-ATAAACTAGAT 679 consensus_9534#1 ------------------------------------------------------------ consensus_9534#0 AAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATTATAATGCAATATGAAA 1123 consensus_9534#2 AAATGTATTGTGAATTTAAGGACAGGAATGAAATACAAACAATT---------------- 723 consensus_9534#1 ------------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||