cluster # 9537

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Anopheles gambiae
cluster # 9537 cluster # 9537 Sequences # 18 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9537#0 length = 1084 sequences # 11
consensus_9537#1 length = 689 sequences # 1

consensus_9537#2 length = 679 sequences # 4
consensus_9537#3 length = 218 sequences # 1
consensus_9537#4 length = 126 sequences # 1

consensusID : consensus_9537#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1084
fasta sequence

                              [ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC-GGAGCG-AAACTG-AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG-TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGGAAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAAATGCATTG]

[+] EMBL CNS08XLJ             [ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTGTTCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGGAAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAAATGCATTG]
[+] EMBL CNS099T3             [     tCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACAGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCA                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08R61             [              AGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGcacgca                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09AY0             [               GGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTA                                                                                                                                                                                                                     ]
[+] EMBL CNS09HGZ             [                   TAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGACCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAAC                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09FCN             [                       AGCAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGT CTTCA CAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09KDT             [                         CAACTCGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCC                                                                                       ]
[+] EMBL CNS09FDR             [                              CGTTACGCTAGCGATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGC ACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCATCAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09FE5             [                                          GATCGACCACAAGGCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09FBP             [                                                       GCATCACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCCGGGAGCGAAAACTGAAACAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09QR5             [                                                                                          CCTTTACGGTTGCCTTATTCATGGGCGTTCTCAGTGTAAGTATTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCTTTTATGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGATGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGTGGCC GGAGCG AAACTG AACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGTGAACGGACAGAGCATCAACATCGATACCAGTTG TCTCGGGTTTTTGCGCCAAAGCATCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTCGCTTGCGTCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTACGCAACTGCAACAAATCTGTCTCGGAT                                                                                                                                                                                                                          ]




>consensus_9537#0
ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATC
ACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTC
TCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCT
TTTTTGCTCCTCGGTACAGGTTTCGTTAGCACAACGTGAAACATCTCTTAGAGTCATCGA
TGCGCTACGCGACCTCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGCAGT
GGCCGGAGCGAAACTGAACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGCATC
GCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAAGCGAACGTATTACGGCAGGT
GAACGGACAGAGCATCAACATCGATACCAGTTGTCTCGGGTTTTTGCGCCAAAGCATCGA
CGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATGCTTC
GCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCATTCGT
GAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAACCAT
TGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGACCGA
GGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGGCTTA
CACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGCTTAC
GCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAACCAAC
GGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAGAAGA
GACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGGAAGT
GCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAAATGC
ATTG

consensusID : consensus_9537#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence

                              [CCGCCCACGCGTCCGGACAACAGCTTACGTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAACTTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTCGCTAGAGAAGAGTTAAAAAATCAGTAGGAACTGTGTATATTGCGTTATATTGTTAAATGACACCTCAAGTGTTTTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTAAGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGACTTTGAGCAAAATAACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCGATCAAACCTTTACTGGTGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCCAACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGGTTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGACCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTGTTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGACCGAAGCTAATCGTCT]

[+] EMBL BM622092             [CCGCCCACGCGTCCGGACAACAGCTTACGTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAACTTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTCGCTAGAGAAGAGTTAAAAAATCAGTAGGAACTGTGTATATTGCGTTATATTGTTAAATGACACCTCAAGTGTTTTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTAAGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGACTTTGAGCAAAATAACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCGATCAAACCTTTACTGGTGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCCAACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGGTTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGACCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTGTTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGACCGAAGCTAATCGTCT]




>consensus_9537#1
CCGCCCACGCGTCCGGACAACAGCTTACGTTCTTTTGGTAGGTGATCGAGAGCCAGTTCA
CTTGTAGTGGGACTGTTAACTTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGA
AATGTCTAGCAAATAATTTCGCTAGAGAAGAGTTAAAAAATCAGTAGGAACTGTGTATAT
TGCGTTATATTGTTAAATGACACCTCAAGTGTTTTAAGCGATTGTGTTAGAAGTGCTATA
ATAAAGTGATTGATTAAGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAG
ACTTTGAGCAAAATAACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCGATC
AAACCTTTACTGGTGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCT
CAATAGTAGTGCCAACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGC
ATTATTGCTGTGGTTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGA
ACGGATACCTGGACCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAG
TTCGCACTCCGTGTTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAA
AATATGGATAGGACCGAAGCTAATCGTCT

consensusID : consensus_9537#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 679
fasta sequence

                              [CCGAAACATTACAAAAATCAATCACAACATTGTGTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCCAAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG-CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA]

[+] EMBL BM621473             [CCGAAACATTACAAAAATCAATCACAACATTGTGTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCCAAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATATTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATTTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCAGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAAAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGCTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGGAGTGT                                                 ]
[+] EMBL BM654775             [                                                                                       ccGCCCAAATGATAGCAGTTCGCAGATTAGCAGCGCTATTGATAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGT        ]
[+] EMBL AGA285677            [                                                                                                                                                                ATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTCAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGCTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACGCCTCGATATCGAAAACAGGATGAAAGAGCTGGGCA                                                                                                                                                       ]
[-] EMBL AGA284371            [                                                                                                                                                                                                                                                                                   CGTACCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTCAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGCTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACG CTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGATGATTTACGTTAAGTGGTTTTGCTATGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGTTAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA]




>consensus_9537#2
CCGAAACATTACAAAAATCAATCACAACATTGTGTAATTTTCCTACGAAATAGACTTTAA
TTTATTGACCATACATAGGTTTAAGCATGGCCCAAATTTTAGCAGTCCGCAGATTAGCAG
CACTATTGAAAAACACACATCGCTGCCAGTTCCTGCCGGCATCGGCCAACATTGCCAGTT
CAACGACAAACCAAAGGCAAGAAAATCGCAAAGAAGAGGTCAACAATGAACCGATCAAAT
ACTTCGGCAGCCAGGCATCTCGCTGGACGGCACAGCGTAGCCGGGAGGGTCCCAAGGGAC
AAGATATTCCGTGGTTTCAGCCGTACGTGGTAAACTTTAGTGTGGCAGTATTTCTCATCT
ACTTCTGCATTTTGCGCGAAGAAAACGACATTGACGAAGGTTTGGGGCGGTCGCTTTTCG
AGCATGTTCCGGGGCTGGAGGAAAAGCAGCTGATTCTGAGCTACCACTACAACAAGGAGA
ACGGTCTACCAACGCTCGATATCGAAAACAGGATGAAAGAGCTGGGCATGAACTTTGAAG
CTGCCAACTAGAGCGGTTTGTTACAAAAAAAAAGTTGATTTACGTTAAGTGGTTTTGCTG
TGTACCATAATATCTAGCCTTTTGAAGTGTAAGCTGTAACACGCGATAAAATAAATTAGT
TTCCAAAGTGTAAAAAAAA

consensusID : consensus_9537#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 218
fasta sequence

                              [CGGCTGTTGCGTACCAAAGCGGGCAGCAGCAAGTATGGCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGGTTAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGACTGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACGCT]

[+] EMBL BX603141             [CGGCTGTTGCGTACCAAAGCGGGCAGCAGCAAGTATGGCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGGTTAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGACTGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACGCT]




>consensus_9537#3
CGGCTGTTGCGTACCAAAGCGGGCAGCAGCAAGTATGGCGTACTGAGGAGCAATTCAACG
CCGCGGTACTACACGTTCCTGGACATTCGTATCGGTTAGGTTTCCCTCTTTTCTGGATGG
CTTTTTCACTCCGAATTGGCTGGTGATGCTACTGACTGTGCTGGCCTGCCTACCACCCTC
GGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACGCT

consensusID : consensus_9537#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 126
fasta sequence

                              [TATCTTTTGCTTCGTTAATTTCTTCTTTAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCATAATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA]

[+] EMBL BM646624             [TATCTTTTGCTTCGTTAATTTCTTCTTTAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCATAATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA]




>consensus_9537#4
TATCTTTTGCTTCGTTAATTTCTTCTTTAGTAATTCTTTATAGAAATCAATATATAGAAG
AAGATCATAATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAA
TGCCAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9537#1      --------------------------------CCGCCCACGCGTCCGGACAACAGCTTAC 28
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      ATCTGCCAGACAGGAGGTGTAATAGCAACTCGTTACGCTAGCGATCGACCACAAGGCATC 60
consensus_9537#2      ---------------------------CCGAAACATTACAAAAATCAATCACAACATTGT 33
consensus_9537#3      ----------------------CGGCTGTTGCGTACCAAAGCGGGCAG-CAGCAAGTATG 37
                                                                                  

consensus_9537#1      GTTCTTTTGGTAGGTGATCGAGAGCCAGTTCACTTGTAGTGGGACTGTTAA--------C 80
consensus_9537#4      ------------------------------------------TATCTTTTG--------C 10
consensus_9537#0      ACTACACAAATTTCAGAATGAAAGCCTTCACCTTTACGGTTGCCTTATTCATGGGCGTTC 120
consensus_9537#2      GTAATTTTCCTACGAAATAGACTTTAATTTATTGACCATACATAGGTTTAAGCATGGCCC 93
consensus_9537#3      GCGTACTGAGGAGCAATTCAACGCCGCGGTACTACACGTTCCTGGACATTCGTATCGG-T 96
                                                                      *           

consensus_9537#1      TTTGTGAAGATATTGTTAACAGTCCATTTTAGTTGATTGAAATGTCTAGCAAATAATTTC 140
consensus_9537#4      TTCGTTAATTTCTTCTT--TAGTAATTCTTTATAGAAATCAATATATAGAAGAAGATCAT 68
consensus_9537#0      TCAGTGTAAGTTTTTCTTCATTCCATTTCTGAACGAACTAGATACAAATCGTTAAACGCT 180
consensus_9537#2      AAATTTTAGCAGTCCGCAGATTAGCAGCACTATTGAAAAACACACATCGCTGCCAGTTCC 153
consensus_9537#3      TAGGTTTCCCTCTTTTCTGGATGGCTTTTTCACTCCGAATTGGCTGGTGATGCTACTGAC 156
                          *       *                                               

consensus_9537#1      GCTAGAGAA-GAGTTAAAAAATCAGTAGGAAC-TGTGTATATTGCGTTATATTGTTAAAT 198
consensus_9537#4      AATATTAATCGGGTTATTTTATTAGTATTAACATTTGTAATATCTATAATAATGCCAA-- 126
consensus_9537#0      TTTTTGCTCCTCGGTACAGGTTTCGTTAGCAC-AACGTGAAACATCTCTTAGAGTCATCG 239
consensus_9537#2      TGCCGGCATCGGCCAACATTGCCAGTTCAACGACAAACCAAAGGCAAGAAAATCGCAAAG 213
consensus_9537#3      TGTGCTGGCCTGCCTACCACCCTCGGTAGAGGGGAACTTCCCCGTTGGGAAATTTCGACG 216
                                     *        *                         *         

consensus_9537#1      GACACCTCAAGTGTT--TTAAGCGATTGTGTTAGAAGTGCTATAATAAAGTGATTGATTA 256
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      ATGCGCTACGCGACC--TCCATCCTGCTTACAAGCAGCTGCGCGATGTCGTCGTCCAGGC 297
consensus_9537#2      AAGAGGTCAACAATGAACCGATCAAATACTTCGGCAGCCAGGCATCTCGCTGGACGGCAC 273
consensus_9537#3      CT---------------------------------------------------------- 218
                                                                                  

consensus_9537#1      AGAATTTGAAAGCCAAACATTTGTTTGAGAAGTGGTGGTCAGAGAC--TTTGAGCAAAAT 314
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      AGTGGCCGGAGCGAAACTGAACAGCTCAGAAGTGATCTTCAAGTTCAACATAGACATTGC 357
consensus_9537#2      AGCG--TAGCCGGGAGGGTCCCAAGGGACAAGATATTCCGTGGTTTCAGCCGTACGTGGT 331
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      AACATAACAAGCAGAAAAAGCTTTTGTCTTTTTCCATACATCG-ATCAAACCTTTACTGG 373
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      ATCGCGCAAAGAATCGTTCATGCAAACCGCCATCAAGACAGAA-GCGAACGTATTACGGC 416
consensus_9537#2      AAACTTTAGTGTGGCAGTATTTCTCATCTACTTCTGCATTTTGCGCGAAGAAAACGACAT 391
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      TGTTAACGAAACAACATGTCAGCAACAATTGCGCATACAGATGGCCTCAATAGTAGTGCC 433
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      AGGTGAACGGACAGAGCATCAACATCGATACCAGTTGTCTCGGGTTTTTGCGCCAAAGCA 476
consensus_9537#2      TGACGAAGGTTTGGGGCGGTCGCTTTTCGAGCATGTTCCGGGGCTGGAGGAAAAGCAGCT 451
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      AACATTATTTCACCAATCAACATGTTCTACTTCCTGCTTACTCCTGCATTATTGCTGTGG 493
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      TCGACGTGAACATGAATCTTGCGGGTGTGTCCTTCACCAACTGCCTGAACAACGTTGATG 536
consensus_9537#2      GATTCTGAGCTACCACTACAACAAGGAGAACGGTCTACCAACGCTCGA-TATCGAAAACA 510
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      TTTTTCTATTGGCGTTTATCACGACGCCACATGCTAGAACTAGCTGAACGGATACCTGGA 553
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      CTTCGCTTGCATCAGAAATCACGCGCGTGTACGCTGAGCTACAAGTGAACGAAACATCAT 596
consensus_9537#2      GGATGAAAGAGCTGGGCATGAACTTTGAAGCTGCC-AACTAGAGCGGTTTGTTACAAAAA 569
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      CCGAAAGGACTCCCTTTGATTGGAAACGCCTTAGACCTTGTTGGCAGTTCGCACTCCGTG 613
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      TCGTGAATCTGAGCGTGTACGATGTGTTCCGTGGGCAGAACGTGTTCGTAAACCCGCAAA 656
consensus_9537#2      AAAAGTTGATTTACGTTAAGTGGTTTTGCTGTGTACCATAATATCTAGCCTTTTGAAGTG 629
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      TTCCGCACAATTATCGAGAAGGGCAAGGAATATAACGAAGTGATTAAAATATGGATAGGA 673
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      CCATTGTCGATCGGTTGGTGGAGAAGCTGTCCTCGCTGCAGCAGGCTCCGACCGAATTGA 716
consensus_9537#2      TAAGCTGTAACACGCGATAAAATAAATTAGTTTCCAAAGTGTAAAAAAAA---------- 679
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      CCGAAGCTAATCGTCT-------------------------------------------- 689
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      CCGAGGAGCTGACCCTTCTGGTTGAAGCGTTCGAGGGTCGGCTGGGTGAGGTTCGGGCGG 776
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      ------------------------------------------------------------
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      CTTACACCAGTTGCCTGACGATGAACGACCAGCTGCTACAGACCACACTTGGCACGGTGC 836
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      ------------------------------------------------------------
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      TTACGCAACTGCAACAAATCTGTCTCGGATCGTTACTGCCGGCTGCTTCTACCTCGGAAC 896
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      ------------------------------------------------------------
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      CAACGGAGGAAACTGAGCAAACGGAACAAACAGACCAAACCGAGCAAACGGAAGCAACAG 956
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      ------------------------------------------------------------
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      AAGAGACAGAATCTACCGAACCGGCCTCGGAACCAGCGCCCGAGATTCCAACCGAAACGG 1016
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      ------------------------------------------------------------
consensus_9537#4      ------------------------------------------------------------
consensus_9537#0      AAGTGCCTCCCACTGAAGTGGCTGAACCGGAACCACCTACTCCAGGTGTAGTTTATAGAA 1076
consensus_9537#2      ------------------------------------------------------------
consensus_9537#3      ------------------------------------------------------------
                                                                                  

consensus_9537#1      --------
consensus_9537#4      --------
consensus_9537#0      ATGCATTG 1084
consensus_9537#2      --------
consensus_9537#3      --------