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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9548#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1579 fasta sequence
[CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATCGGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAAGGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGTGATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAGTGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCACGAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCATGCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGAACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCCCGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAAGCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTACCGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCTGCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCAACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCCGCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATCGGACCGGTACAGCCCGGTGTACTCGCCGGAGACGGGCCGCGTGAAGATCAAGATGACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTTGGGACGGGGGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCGGGAGCCGTCGGGTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACNGGGGTTGTGTGTGCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATCCTGCGAACCTTCCAACCGCCCGGATGGAATG]
[+] EMBL BM652304 [CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATCGGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAAGGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGTGATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAGTGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCACGAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCATGCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGAACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCCCGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGG ]
[+] EMBL BM628427 [ ccgAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCCGCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTACCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAAGCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTACCGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCG ]
[+] EMBL BX625670 [ CGACCGGAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGAGCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGATGAAGCCCGTGCGCACCTCGCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGCGGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCTGCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCAACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCCGCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATCGGACCGGTACAGCCCGGTGTACTCGCCGGAGACGGGCCGCGTGAAGATCAAGATGACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTTGGGACGGGGGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCGGGAGCCGTCGGGTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACNGGGGTTGTGTGTGCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATCCTGCGAACCTTCCAACCGCCCGGAT ]
[+] EMBL BX621506 [ GACTCCTGACCATGTGTGACGTACGCCGGCGTTATCTTGCGCGGACGGGGGTTGTGTGTGCCTTGNTTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGCCTCGACCTGATACTGCGAACCTTC TCCGCCCCGATGGAATG]
consensusID : consensus_9548#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 742 fasta sequence
[CCGCCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTAATATTTAATTCCCGAAGGATTATAACAG--AAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG-GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC-AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA-GGAGTCCGCCACGAACAG-CACGTCCAGCTTGGGCGAAAGATGCGG]
[+] EMBL BM617839 [CCGCCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTAATATTTAATTCCCGAAGGATTATAACAG AAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGTTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCGTGAAACGGTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACGACCAGCAAAACCACCAACTCTAAGGGGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAGATCATCCATCACCTCGATGGGGGGCGTCAGCGGCTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACTAAGGACGATTCGAGCGACAATCAGGCCGGTGGGACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCACCACCCCGGCTGCGGTGGGCGCATCTGCCGGGACGGATGTTGGTGGTGGAGGTGCGTTGATAAATTCCGACAACAGATCGTCGCTCGCCAACCGAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCCGCGGGACGGTTTTGAACCGAGCCACTACACCCACCAAGGGAGTCCGCCACCAACAGCCACGCCCATCTTGGGCGAAAGATGCGG]
[+] EMBL BM585937 [ ccgATTCCCGAAGAATTATAACAGAAAAAACACGCCAGAATGTCCACGAAATCATCCAACAGCATTGACAGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATTTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAAGCGGAGCGGCTGTTTTCCAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGCTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTTGCCGCATC ]
[+] EMBL AGA281921 [ AGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCCAAATCAT ]
[+] EMBL AGA282695 [ AGCCGCACCGAGCTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGA ]
[+] EMBL AGA282837 [ CTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCTTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGTCAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACCATTCGAGCGACAATCAGGCCGGTGGCAC ]
[+] EMBL AGA282840 [ CTGGCCGATCTTGTTAAAAGAAAGGCAGAAATCTCG GAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCTTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGC ]
[-] EMBL AGA281217 [ GGAGCGACTGTTTTCGAAATCATCCATCACATCGAT GTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ]
[-] EMBL AGA280225 [ ttGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ]
[-] EMBL AGA281066 [ CGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACC AATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAA GGAGTCCGCCACGAACAG CACGTCCAGCTTG ]
consensusID : consensus_9548#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CCGTTTGTTTCAATGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCAGGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCCAGCTT]
[+] EMBL BM597449 [CCGTTTGTTTCAATGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCAGGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGACACCCAGCTGTACGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCCAGCTT]
consensusID : consensus_9548#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 583 fasta sequence
[GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCC]
[+] EMBL AGA282973 [GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAA ]
[-] EMBL AGA281367 [ AATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGCTAATGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAACCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTTCGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACAC GAGCGACACCAAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAGGCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGCGCGCGAACCCGCCACCCCGGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTCCGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTCCGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCACGTCC]
consensusID : consensus_9548#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence
[GACNCCGATCCTGGTGACGCGAANCCGTTCGCGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGCACGTGTCGGGACGGGGGCGCCCGCGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGGTTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGGCGTTATCTTGCGCGGTACGGGGTTTGTGTGTCCCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTCGACCTGATCCTGCGAACCTTCTCCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCCTGGC]
[-] EMBL AL695694 [GACNCCGATCCTGGTGACGCGAANCCGTTCGCGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGCACGTGTCGGGACGGGGGCGCCCGCGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGGTTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGGCGTTATCTTGCGCGGTACGGGGTTTGTGTGTCCCCTTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTCGACCTGATCCTGCGAACCTTCTCCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGGAACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGTTTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCCTGGC]
consensusID : consensus_9548#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 301 fasta sequence
[CAGATCGGCACGAGGNCGGTAAGACGGGCCGCGTGAAGATCAACGATACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTCGGGACGGGGGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGTCGGGTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGGGGTTGTGTGTGCCTNTGATTTG]
[+] EMBL BX469249 [CAGATCGGCACGAGGNCGGTAAGACGGGCCGCGTGAAGATCAACGATACCGAGACGCCCAAACCGAAGACGCCGATCCTGGTGACGCGAAGCCGGTCGCGGGCCGGCGACATCATCACCACGATGGACGACCAGAAGTTCTAGGGCACGGTCGGGACGGGGGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGTCGGGTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGGGGTTGTGTGTGCCTNTGATTTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 CCGGGTGAAGCGGCACGAGCCACCAATCGTGGTGGATAACAGTGAAGCTGAGGACGCATC 60
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GGGCGATGGCGGAGTGGCGATCGGGGAGGAATCCACCATTGGCGAGGAGGCACGGCGGAA 120
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GGTGTTCGATGGGCCGACGGTCGAGGGCAGTGGCGAAGAGACGGACCACAGTGCTCGTGT 180
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GATGGCTGCGGAGGTCGAGGAGGATGGCGAAGGTGATGAGGACGTCACGGACGATGGCAG 240
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 TGGCAGTGGGGGCGGTTTTATGGTTGACGTCGCACGGGTCCATGATCTCGAGCCGACCAC 300
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GAGCAGCTCGACAGAGACGCCGCTCGACGAGGAGGAACCGGAAGAGGCACCGATGGGCAT 360
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCCCAACCTGCACGACGGGCTCGGCATCTTCCGGGACGACAAGGAGGAGGACGACCTCGA 420
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 ACCGACCTCGGAAGAGACCACCTCGGAGGGCACGAACGCACGCGTCATGGTCGGTGCGCC 480
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 CGGCATTATGAAGACGGCCAGCGATGGAACGGCGGCCGGTGATGGATCGTCAGAAACTCC 540
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCTCGTCGCTGGCGGAGCGCTCGTACCTCCACAGTCAGAGGAAGATAACCAGAAGACCTA 600
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 CCTGCTGCTCGCCATCCTGGGCATCATCGTCGTGTCGCTCATCGTGATGGTGGTGTGCAA 660
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCGCAAGCCGGACTCGCGCAACCGCCGCGGCAAGTACGACGTGGAGACGGCAAACGGTAC 720
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 CGGGCGCGAGATGAAGGAGATGAACAAGAACCTGCTGGGCGAGAAGGGACCGGCCGACCG 780
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GAACGGGCGCGGTGTACCCGAGCAGACGCCGCTCATGTCGCCGGACAAAAACGACTACGA 840
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ------------------------------------------------------------
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCGGGTGTTCGGCGACCCGCAGAAGACCGCCTTCAGCCCGGTGAAGCCCGTGCGCACCTC 900
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ---------------------------------------------------------CCG 3
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCTCGAGAAGCCGATGGAATCGTTCAAACCGATCGCGGCCGAACGGCGCACGAACGATGC 960
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 CCTAATCCAAACATGAGGAAACATTCCCATCTTCTTGCTGTGCACCGAGCTAGTCCGCTA 63
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GGCCGGTGCCCCCGCGGACAACAACAACACGGCCACGCTGCCGAACGGCAACGGTGCGCT 1020
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ATATTTAATTCCCGAAGGATTATAACAGAAAACACGCCAGAATGTCCACGAAATCATCCA 123
consensus_9548#2 ------------------------------------------------------------
consensus_9548#3 ------------------------------------------------------------
consensus_9548#0 GCAGAACGGTGACGGCCCGGCCGGTGTGCACCGACAGCCGGACCACCCGAACCACCACCA 1080
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 ACAGCATTGACAGCCGCACCGAGCTGGCCGATCT--TGTTAAAAGAAAGGCAGAAATCTC 181
consensus_9548#2 ---------CCGTTTGTTTCAA--TGGCCAACCTAATGTTTGTGTACCTTTCTGCGTCCA 49
consensus_9548#3 ---------------GAATGAGAGTGGGTGGTTTTGGGTGGAACGGGACATCT-TTCGTT 44
consensus_9548#0 ACAACAAGTGCCATCAACGAACGGGGACGTGACCGATCCGGACGGCCACCTGGCGGTGCC 1140
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 GGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGA 241
consensus_9548#2 GGAAACGTTAGCGAACTTGGAACGGCAAATTTATGCCTTCGAGGGATCGTATCTGGAGGA 109
consensus_9548#3 GCTTCTATCTGCCGACCTGGG-CGGC--GTCATCTTCATCGGTGTTTCCTGTGCGGGCTA 101
consensus_9548#0 GCTCGAGTCGCCCCGCTCGAAACGCTACAGCCCCATCTACGTGCCTACCTCGCCGAAATC 1200
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 CACCCAGCTGTAC-GGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 300
consensus_9548#2 CACCCAGCTGTAC-GGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 168
consensus_9548#3 TGGCTAA-TGCACAGGAAACATCATCCGCGGGTGGGATCGGTACCTGACCACCAACAAAA 160
consensus_9548#0 GGACCGGTACAGCCCGGTGTACTCGCCG-GAGACGGGCCG---CGTGAAGATCAAGATGA 1256
consensus_9548#5 ---------CAGATCGGCACGAGGNCGGTAAGACGGGCCG---CGTGAAGATCAACGATA 48
consensus_9548#4 ------------------------------------------------------------
consensus_9548#1 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 360
consensus_9548#2 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 228
consensus_9548#3 CCACCAACTCGAAGGCGGACAAACGGAACCGAAAGTTTAAGGAGGCGGAGCGACTGTTTT 220
consensus_9548#0 CCGAGACGCCCAAACCGAAGACGCCGATCCTG--GTGACGCGAAGCCGGTCGCGGGCCGG 1314
consensus_9548#5 CCGAGACGCCCAAACCGAAGACGCCGATCCTG--GTGACGCGAAGCCGGTCGCGGGCCGG 106
consensus_9548#4 -------------------GACNCCGATCCTG--GTGACGCGAANCCGTTCGCGG-CCGG 38
* * ** ** ** ** * * **
consensus_9548#1 CGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACG-AGCGACACC 419
consensus_9548#2 CGAAATCATCCATCACCTCGATGGCGGCCGTCAGCGGTTTGGTGGACACG-AGCGACACC 287
consensus_9548#3 CGAAATCATCCATCACATCGATGGCGGCCGTCAGCGGTTTGGTGGACACGGAGCGACACC 280
consensus_9548#0 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGGGCACG-GTTGGGACGGG 1368
consensus_9548#5 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGGGCACG-GTCGGGACGGG 160
consensus_9548#4 CGACATCATC-ACCACGATG--GACGACCAGAAGT--TCTAGG-CACGTGTCGGGACGGG 92
*** ****** * *** * * ** ** ** * * * ** * * ***
consensus_9548#1 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 479
consensus_9548#2 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 347
consensus_9548#3 AAGCACGAGCGCAACTCGGAATCCGACTCGATGACGAACGACGATTCGAGCGACAATCAG 340
consensus_9548#0 GGCGACCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCC-GGGAGCCGT-CGG 1426
consensus_9548#5 GGCGCCCGGCGGGCGCTACCGCTGGACACCTCGTGACATGCTGCCCAGGGAGCCGT-CGG 219
consensus_9548#4 GGCGCCCG-CGGGCGCTACCGNTGGACACCTCGTGACATGTCTGCCCGGGACCCGTTCGG 151
* ** *** * * * * * * * * *
consensus_9548#1 GCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 538
consensus_9548#2 GCCGGTGGTACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 406
consensus_9548#3 GCCGGTGGCACGCATTCCACCGTGAACCATTCGTCGGGCGC-GCGCGAACCCGCCACCCC 399
consensus_9548#0 GTCGTCGTGACTCGTGACCATGTGTGACGTACGCCGG-CGTTAT-CTTGC-GCGGACNGG 1483
consensus_9548#5 GTCGTCGTGACTCGTGAGCATGTGTGACGTACGCCGGGNGTTATACTTGCAGCGGACGGG 279
consensus_9548#4 TTCGTCGTGACTCGTGACCATGTNTGACGTACGCCGG-CGTTAT-CTTGCGCGGTACGGG 209
** * ** * * ** * * ** *** * * * **
consensus_9548#1 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 598
consensus_9548#2 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 466
consensus_9548#3 GGCTGCGGTGGCCGCATCTGCCGGGACGGATGGTGGTGGTGGTGGTGCGTTGAAAAATTC 459
consensus_9548#0 GGTTGTGTGTGCC---TTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTG-CCTC 1539
consensus_9548#5 GGTTGTGTGTGCC---TNTGATTTG----------------------------------- 301
consensus_9548#4 GTTTGTGTGTCCCC--TTGATTGTAAGCGTTGCTGCTGATAATCTACTAATCCTGGCCTC 267
* ** * ** *
consensus_9548#1 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 658
consensus_9548#2 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 526
consensus_9548#3 CGTCAACAAATCGTCGCTCGCCAACCAATCGAAAGCCAACGCGGCGGACAAATCGTCGTC 519
consensus_9548#0 GACCTGATCCTGCGAACCTTCCAACCGCCCGGATGGAATG-------------------- 1579
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 GACCTGATCCTGCGAACCTTCT--CCGCCCGGATGGAATGAGATTGGTTGTTTTGGGTGG 325
consensus_9548#1 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 718
consensus_9548#2 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 586
consensus_9548#3 CGGCGGTACGTTTTTGAACCGCGCCACTACACCCACCAAGGAGTCCGCCACGAACAGCAC 579
consensus_9548#0 ------------------------------------------------------------
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 AACGGGACATCTTTCGTTGCTTCTATCTGCCGACCTGGGCGGCGTCATCTTCATCGGTGT 385
consensus_9548#1 GTCCAGCTTGGGCGAAAGATGCGG------------------------------------ 742
consensus_9548#2 GTCCAGCTT--------------------------------------------------- 595
consensus_9548#3 GTCC-------------------------------------------------------- 583
consensus_9548#0 ------------------------------------------------------------
consensus_9548#5 ------------------------------------------------------------
consensus_9548#4 TTCCTGTGCGGGCTATGGATAATGCACAAAAAGAAAAAAAAAAAACAGGCATTTNAAGCC 445
consensus_9548#1 ----
consensus_9548#2 ----
consensus_9548#3 ----
consensus_9548#0 ----
consensus_9548#5 ----
consensus_9548#4 TGGC 449
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||