These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9551#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 950 fasta sequence [ACTGGAAACGA-ACGAGCTTCGTG-TGGAA-GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG-TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG-AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT----TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG-AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG-ATGGGTAGCGATTAACTGCTGAACGCCCCGC----AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGC] [+] EMBL CNS09PAJ [ACTGGAAACGA AAAAGCTTCGTG TGGAA GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGC ] [+] EMBL BM638862 [ ccGAAACGA ACGAGCTTCGTG TGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCAT ] [+] EMBL CNS095A0 [ AAACGA ACGAGCTTCGTG TGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGCTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGGCGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACGGTTGAACGCCCCGCAGCGAGTCGCAGCGGTTATTCTTCGACAGATTGC ] [+] EMBL CNS093UE [ aAAAC A ACGAGCTTCGTG TGGAC GAAA CCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACC ] [+] EMBL CNS094Y2 [ AACGACAC CGCTTCGTG TGGAC GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAG ] [+] EMBL CNS09BQZ [ CGTGTTGGAA GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGCAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTG TTCGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGC] [-] EMBL CNS094Y3 [ c GAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTG TGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTAACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTGTTTTTAGGGGACAAAAAAAAAAAAAAA ] [-] EMBL CNS095A1 [ AAATGTCCCAGACAAAGGAAAAAG AGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGGCGGCAAAGAGCACATGCTGGAACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACGGTTGAACGCCCCGCAGCGAGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAG TATACAATTTTAAG GTTTTTt ] [-] EMBL CNS09PAK [ AGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTTACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGGACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTTATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTTACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCCACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGCCTG ] [-] EMBL CNS093UF [ AAATTATCGGTTAAGGGTTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAGTTATACAATTTTAAGC ] [-] EMBL CNS09BR0 [ TAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCG AAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGCACTGCCCGCGTGGATCGGAGCG ATGGGTAGCGATTAACTGCTGAACGCCCCGC AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCAACTGTTATTGCATTATATTGTCATAGTTATACAATTTTA ] [-] EMBL CNS09FDH [ AGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCTCGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAAAATCCGAACTGCCCGCGTGGATCGGAGCGTATGGGTAG ] consensusID : consensus_9551#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 753 fasta sequence [TTTCCACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTCACAAGAACTGGAAATAGAAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAACACATGCTGGCCCGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCTCGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAAATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG] [+] EMBL BX620075 [TTTCCACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTCACAAGAACTGGAAATAGAAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAACACATGCTGGCCCGCGTGTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGTAGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGGACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCTCGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAAATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG] consensusID : consensus_9551#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 707 fasta sequence [CCGGCGCTCTTTATTCCCATGTAAACAACATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG] [+] EMBL BM619264 [CCGGCGCTCTTTATTCCCATGTAAACAACATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATT ] [+] EMBL BM613323 [ ccGCTTCAAGCGCTTGTGTATCGTGTTAAAAATCGTATTTGCTTCACAAACCTTCCCTTCCGCAATGGTCGAACGAATCGAGGATCTGAACCTGCCCAACACATCGGTGACCAGGCTGATCAAGGAAGCGATTCCGGCCGATGTGAAAATCTCCAGCGAATGCCGCGTCGCGCTAGCCCGGGCAACTTCCGTGTTCGTCCTGTATCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGACCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGGATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAG ] [+] EMBL BM650809 [ ccGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAGGCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCCAAACCGGATACGGATACGACGGTGGAAGGTGCGGTAATTGATTTGGAGAACATGGAAAACATGCAGGACGGTTGAATGGCGAGCCTCGCGCGCACGTTAGCGGTTAAGGAATAAACGATATTATTTTGTAATATTAAAAACGCCCGGACCCGACGGTGTTGTTGCATGATGTTCGGAAAGAAGGAAACAATACTTCCGGGAATGTTGTGTAGTAAAAACAGGCTTAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG] consensusID : consensus_9551#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTG-ATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGT-GAATAA-GGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATC-TGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCG] [+] EMBL BM640811 [CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTG ATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGT GAATAA GGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATC TGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATCCCGCTACCGTCCAATAGCGAAAAAGGCGGGCTCGTTCGGGACGCCTAGCCTTAAAAGCATCGCG] [+] EMBL BM592101 [ ccgGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGTATGTTGTGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCATGTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAGTTAAGCAAATTATCGGTTAAGGATT TAAAATCTCAGGTCACAAGAACTGGGAATAGGAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGATTGTGAAATGGTAGGCATTGGACCGGACGGCAAAGAGCACATGCTGGCACGCGTGTCCATCGTGAACGAGCAGGGCGATGTGCATTGTCGATTGCTACGTGAAGCCACAGGAAACGGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGGAATAAGGGGTGTAGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGGACATGCATTGAAAAACGATCTTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCGGGACACATC ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9551#0 ACTGGAAACGAACGAGCTTCGTGTGGAAGAAACCCCGTTTTCAACCCAATTCTGAAGAGT 60 consensus_9551#1 --------------------------------------TTTCCACCCAATTCTGAAGAGT 22 consensus_9551#3 -CCGCGGACGCGTGGGTTCGTGTGGAACGAAACCCCGTTTTCAACCCAATTCTGAAGAGT 59 consensus_9551#2 -------------------------------CCGGCGCTCTTTATTCCCATGTAAACAAC 29 * * * * * * ** * consensus_9551#0 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 119 consensus_9551#1 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 81 consensus_9551#3 ATGTTG-TGACGATTTTGTGTTTTCTTAAAGCTTTCTGATTTCGTGTACAGTTAAATCAT 118 consensus_9551#2 ATTCCGGCAGCTGGTTCCATTCTGCTTCAAGCGCTTGTTTATCGTGTTAA---AAATCGT 86 ** * * ** * * *** **** * * ****** * ***** * consensus_9551#0 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAG 179 consensus_9551#1 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAGGAGCAG 141 consensus_9551#3 GTCCATCTAGTGGTTAAAATGTCCCAGACAAAGGAAAAAGAGATCTCACTGGAAGAGCAG 178 consensus_9551#2 ATTTGCTTCACAAACCTTCCCTTCC--GCAATGGTCGAACGAATCGA---GGATCTGAAC 141 * * * ** *** ** ** *** *** * * consensus_9551#0 TTAAGCAAATTATCGGTTAAGGATTT----AAAATCTCAGGTCACAAGAACTGGGAATAG 235 consensus_9551#1 TTAAGCAAATTATCGGTTAAGGATT---------------GTCACAAGAACTGGAAATAG 186 consensus_9551#3 TTAAGCAAATTATCGGTTAAGGATTGTAGTAAAATCTCAGGTCACAAGAACTGGGAATAG 238 consensus_9551#2 CTGCCCAACACATCGGTGACCAGGCTGATCAAGG----AAGCGATTCCGGCCGATGTGAA 197 * *** ****** * * * * * * consensus_9551#0 GAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 295 consensus_9551#1 AAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 246 consensus_9551#3 GAGCAACCGAAAATCTCCGCTTCTGCTACCGGCCGAGGTAACGAACCGGATCGCGCTGGA 298 consensus_9551#2 AATCTCCAGCGAATGCCGCGTCGCGCTA---GCCCGGGCAACTTCCGTGTTCGTCCTGTA 254 * * * * *** * * **** *** ** *** * * *** *** * consensus_9551#0 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAGCACA-----TGCTGGCACGCGT 349 consensus_9551#1 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAACACA-----TGCTGGCCCGCGT 300 consensus_9551#3 TTGTGAAATGGTAGGCATTG-GACCGGACGGCAAAGAGCACA-----TGCTGGCACGCGT 352 consensus_9551#2 TCTCACATCGGCGGCCACCACGGCAGCGCAGCAAAAGAATCAAAAATCGCTCACAGCCGA 314 * * ** * ** * * * * ***** ** *** * ** consensus_9551#0 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 409 consensus_9551#1 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 360 consensus_9551#3 GTCCATCGTGAACGAGCAGGGCGATGTGATTGTCGATTGCTACGTGAAGCCACAGGAAAC 412 consensus_9551#2 CCACGTGCTTAAAGGGCTGGAGGAAATCGAGTTCGAAAGTTTCATCGAGCCGTTAAAAG- 373 * * * ** * ** ** ** * **** * * * * **** ** consensus_9551#0 GGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 469 consensus_9551#1 GGTTACGGATTACAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 420 consensus_9551#3 GGTTACGGATTATAGAACCGAAATCAGTGGAATTCGGCCGGAGCACGTGAATAAGGGTGT 472 consensus_9551#2 ----GCGAACTGGAGAATTTTAGAAAGATGATAAAATCACGAAAAGACAAGAAAGCGGCC 429 ** * * **** * ** ** * ** * * *** * consensus_9551#0 AGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGG 529 consensus_9551#1 AGATTTCAAAACGATCCGTGAACTGGTGAGACAGCTGATTCATGGCAAAATTCTGGTAGG 480 consensus_9551#3 AGATTTCAAAACGATCCGTGAGCTAGTGAGACAGCTGATTCATGGCAAAATTTTGGTAGG 532 consensus_9551#2 AAACCGGATACGGATACGACGGTGGAAGGTGCGG-TAATTGATTTGGAGAACATGG-AAA 487 * * * * *** ** * * * * *** ** * * *** * consensus_9551#0 ACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 589 consensus_9551#1 ACATGTATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 540 consensus_9551#3 ACATGCATTGAAAAACGATCTGATGGTGCTGAACCTAAAACATCCTAAATACAACATTCG 592 consensus_9551#2 ACATGCA-----GGACGGTTGAATGG---CGAGCCTCGCGCGCAC--GTTAGCGGTTAAG 537 ***** * *** * **** ** *** * * ** * * consensus_9551#0 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 645 consensus_9551#1 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 596 consensus_9551#3 GGACACATCCCGCTACCGTCCAATAGCGAAAAAG-GCGGGCTCGTTCGGGACGCC---TA 648 consensus_9551#2 GAATAAACGATATTATTTTGTAATATTAAAAACGCACGGACCCGACGGTGTTGTTGCATG 597 * * * * ** * **** **** * *** * ** * * * * consensus_9551#0 GCCTTAAAAGCATCGCGTATGTTTTTCTCCGCGAGGACATTCAAGACGGTTCACACTGCT 705 consensus_9551#1 GCCTTAAA-GCATCGCGTATGTTTTTCTCCGCGAGGACATCCAAGACGGNTCACACTGCT 655 consensus_9551#3 GCCTTAAAAGCATCGCG------------------------------------------- 665 consensus_9551#2 ATGTTCGGAAAGAAGGAAACAATACTTCCCGGAATGTTGTGTAGTAAAAACAG----GCT 653 ** * consensus_9551#0 CGGTGGAGGATGCACGGGCCGCCATGAAGATCTACATGCTGTTTGAGAAGGAGTGGGAAA 765 consensus_9551#1 CGGTGGAGGATGCACNGGCCGCCATGAAGATTTACATGCTGTTTGAGAAGGAGTGGGAAA 715 consensus_9551#3 ------------------------------------------------------------ consensus_9551#2 TAAAATTGTATAACTATGACAATATAATGCAATAACAGTCGAAGCAATCTGTCG------ 707 consensus_9551#0 AATCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCGATTAACTGCTGAACGCCCCGC 825 consensus_9551#1 A-TCCGCACTGCCCGCGTGGATCGGAGCGATGGGTAGCG--------------------- 753 consensus_9551#3 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 AGTCGCAGCGGTTATTCTTCGACAGATTGCTTCGACTGTTATTGCATTATATTGTCATAG 885 consensus_9551#1 ------------------------------------------------------------ consensus_9551#3 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 TTATACAATTTTAAGCCTGTTTTTACTACACAAAAAAAAAAAAAAAAGGCCAAATGTGCC 945 consensus_9551#1 ------------------------------------------------------------ consensus_9551#3 ------------------------------------------------------------ consensus_9551#2 ------------------------------------------------------------ consensus_9551#0 CGAGC 950 consensus_9551#1 ----- consensus_9551#3 ----- consensus_9551#2 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||