These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1612 fasta sequence [CGAGCAGGACGACCATGACACCGGGGACCTGAGTAAAACTACGAACGCGACCAAGACAGCGCAGGAGAACAGTATTAGCCTGCTGCAGCAGCTGGCGGCCAACAAGTGTACGGAAATTGCGACCGCCGGCAATCATTCCAGCTAACTGACGCTGGCAACCGCCGGTGGTTTGGCTGCGATTCCGATTGACACGGCCAATGCCGCCACAGCACACCCATCCGTTATCGAATGCGATGACGGCGAGGAGGTGGACTAAGCAGGGAAAGCTGTCTGCACCCATACATTTCCAGAATAATGTTTTGC-CACTCGGCAACGGTCCTTTCTTATTGGCTATTTTTCTACACGATAATGTGGCGATGTTTGTAAAGAAAATCTGATTGGAAATATCCAACTGGAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTTAAATGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATATTAAATCTACTAGCCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGT-CGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG-CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT-GTTA-GGGTTAAACACA-GATTGA-GCTACATCGCGATGAACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTTTATTGAGTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACT-GCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGAAGCACAGGAGTTGTATGATCACATC-AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAG-TTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTG--AAAAAAATCTTTAGATACTGTAAG-TCTACAACAAAAAATATGACTTTTTTTCTAAAGCAAATATTGAATGCACGGAATATTATTCGTAT] [+] EMBL BX628583 [CGAGCAGGACGACCATGACACCGGGGACCTGAGTAAAACTACGAACGCGACCAAGACAGCGCAGGAGAACAGTATTAGCCTGCTGCAGCAGCTGGCGGCCAACAAGTGTACGGAAATTGCGACCGCCGGCAATCATTCCAGCTAACTGACGCTGGCAACCGCCGGTGGTTTGGCTGCGATTCCGATTGACACGGCCAATGCCGCCACAGCACACCCATCCGTTATCGAATGCGATGACGGCGAGGAGGTGGACTAAGCAGGGAAAGCTGTCTGCACCCATACATTTCCAGATTAATGTTTTGCACACTCGGCAACGGTCCTTTCTTATTGGCTATTTTTCTACACGATAATGTGGCGATGTTTGTAAAGAAAATCTGATTGGAAATATCCAACTGGAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGATGACTTTTTTTTAAATGGCGACAAAAAGAGCTAAAAGGCGATGATTACAAGCTAAATATTAAATCTACTAGCCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCNAGAACAAGTACGATCAATAACTGATTTGCTGCTTGN TGACAG ] [+] EMBL CNS0979G [ GACCATGACACCGGGGACCTGAGTAAAACTACGAACGCGACCAAGACAGCGCAGGAGAACAGTATTAGCCTGCTGCAGCAGCTGGCGGCCAACAAGTGTACGGAAATTGCGACCGCCGGCAATCATTCCAGCTAACTGACGCTGGCAACTGCCGGTGGTTTGGCTGCGATTCCGATTG ] [-] EMBL AGA280364 [ GACACGGTCATTGCCGCCGCAGCACACCCATCCGTTATCGACTGCGATGACGGCGAGGAGGTGGACTAAGCAGGGAAAGCTGTCTGCACCCATACATTTCCAGAATAATGTTTTGCACACTCGGCAACGGTCCTTTCTTATTGGCTATTTTTCTACACGATAATGTGGCGATGTTTGTAAAGAAAATCTGATTGGAAATATCCAACTGTAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTTAAGTGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATAT ] [+] EMBL CNS09DU7 [ AGAATAATGTTTTGC CACTCGGCTACGGTCCTTTCTTATTGGCTATTTTTCTACACGATAATGTGGCGATGTTTGTAAAGAAAATCTGATTGGAAATATCCAACTGGAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTTAAATGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATATTAAATCTACTAGCCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGTCCGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGC ] [+] EMBL BX606476 [ AATGTGGCGATGTTTGTAAAGAAAATCTGATTGGAAATATCCAACTGGAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTTAAATGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATATTAAATCTACTAGCCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGT CGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGAT ] [+] EMBL BX614453 [ ATCCAACTGGAAATCTACTACTTGAGGCTGCTATGAGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTTAAATGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATATTAAATCTACTAGCCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGT CGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTA ] [+] EMBL CNS093W2 [ GTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGAGAGATCAAGAACAAGTACGATCAATAACTGATTTGCTGCTTGT TGACAGGCACGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCTGTTT AAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAGCCCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGTGGTTAGGGGTTAAACACACGATTGACGCT ] [+] EMBL BX615313 [ CGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGT CGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTTTATTGAGTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACT GCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTA ] [-] EMBL CNS09DU8 [ CTTGTTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTTTATTGAGTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACTCGCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGAAGCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAG TTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTG AAAAAAATCTTTAGATACTGTAAG TCTACAACTAAAAATATGACTTTTTTTCTA ] [+] EMBL BX612395 [ GTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTTCGCAAGTTGTGAGCCATTCGTTTGCCGCTTTACACCCTACAGAAGAACACTAG CCGGTAGATTAGTCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAAT CGCATTCCTCTGGTTTATTGAGTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACT GCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGAAGCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGT ] [-] EMBL CNS0979H [ aGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACCGGACTTGCGTTTTGAACTTTGCACCGCCCCCTAAATGCGCATTCCTCTGGTTTATTGAGTAACATTCATCGAACCGCATAACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACT GCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGATTCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAGTTTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTG AAAAAAATCTTTAGATACTGTAAGTTCTACAACAAAA ] [+] EMBL CNS08JGI [ TGCCACATGCATGCAGACATGCAGACATCGT GTTA GGGTTAAACACA GATTGA GCTACATCGCGATGAACGCAATTACCGTGCACTGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTGTATTGACTAACATTCATCGAACCGCATTACTATTGAATGTGACGGGAGACACAATGCGTCAACAAAGGGCCATT ] [+] EMBL BX612059 [ AACGCAATTACCGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTTTATTGAGTAACACTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGCCATTCTAACCTATCGGTATAACT GCGTGACGCAACATGTAGGCTCACAATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGAAGCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAGTTTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTG AAAAAAATCTTTAGATAC ] [+] EMBL BM580199 [ ccgCGCAATTACCATGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTGTATTGACTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGCGTCAGCATAGGGTCATTCTAACCTATCGGTATAACT GCATGACACAGCATGTAGGGTCATAATCATCACTGGTTAGGGTGAAAGTGAATAGCGCAGGTCCATTTTGTATAACGGATAGAAGCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTGATGGTGTTAAGTTTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTG AAAAAAATCTTTAGATACTGTAAGTTCTACTAC AAAAATATGAC TTTTTTCTAAAGCAAATATTGAATGCACGGAATATTATTCGTAT] [-] EMBL CNS093W3 [ ATTACCGTGCACTGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTGTATTGACTAACATTCATCGAACCGCATTACTATTGAATGTGACGGGAGACACAATGCGTCAACAAAGGGCCATTCTAACCTATCGGTATAACT GCGTGACGCAACATGTAGGCTCACAATCATAACTGGTTAGAGTGAAAGGGAATAGCGCAGGTCCATTTTGTATAACGGATAGAAGCACAGGAGTTGTATGATCACATCAAATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAT TTCACGCAACTCTATACCTTAAATATTGTAACTACATAAAAACTGAAAAAAAAAACTTTAGATACTATAAG Tt ] [-] EMBL CNS08JGJ [ GCGTGACGCAACATGTAGGCTCACAATCATTACTGGTTAGAGTGAAAGGGAATAGCGCGGGTCCATTTTGTATAACGGATAGAAGCACAGGAGTTGTATGATCACATC AATCCATTACACTATGACAGATGCGTATAGACTGGGTATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAATGGTGTTAAT TTCACGCAACTCTATACCTTAAATATTGTAac ] consensusID : consensus_9552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 799 fasta sequence [CCCTCAGCAGATCGGCCCAGGCAGCNTAGAGAGATCAAGAACAAGTACGATCAATAACTGATTTGCTGCTTGTTGACAGGCACGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTCGGGTCTTGTTCCGTAATGTCAAACGATCGTGGCATGCAACATTTCTTACAGAATCTGTCCTTAACCGGGTAGTCACANTGTAACACGGTGATTTCAACTTTGGCTACCTTTGNCCTTCGGGCACCAATTCCTGTTTCACACAGCATGAACCCAAGATGCAATGCACACTGTGTCCTGATTTCGCAAAGTTGTGAGCCATNTCGCTATATGCGACGCTTTTAACACACGCGTACAAGAAGCAACACTAGGCCCGGGTAGATTTAGTCTNTTACGAATGGNCACCGGAATGGCCGCATCTAATTTTTAGGGCCAACGAATCTCGGACTCGTTATATCATTGCNCCACACATGGCCANTTGTCACGGAACCACATTGGCTCANGGACAATCANGTGGTTCTCACACGCGCGGTTACAAAACCAAACCAAGGAACTTCGGAAGGCGTAACCAATACCGCCCGCAATTGGAAACAACATGCCCACAAGTTTAAACCCGGTNGGNCAACCTTGGGGAAACCNTTTTCGGNCCGCGTTCTCATCAGGAACACCCCTCNTTTTGGCACAACAAAAGGTGACCCCCCCCTTAAAAAAATTGNCGCGCACAATTTATTCCCCATTCCCTGAGGTGGGTGTACATACTGGANGCATTCAGAACAGTGTCC] [+] EMBL AL696675 [CCCTCAGCAGATCGGCCCAGGCAGCNTAGAGAGATCAAGAACAAGTACGATCAATAACTGATTTGCTGCTTGTTGACAGGCACGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTCGGGTCTTGTTCCGTAATGTCAAACGATCGTGGCATGCAACATTTCTTACAGAATCTGTCCTTAACCGGGTAGTCACANTGTAACACGGTGATTTCAACTTTGGCTACCTTTGNCCTTCGGGCACCAATTCCTGTTTCACACAGCATGAACCCAAGATGCAATGCACACTGTGTCCTGATTTCGCAAAGTTGTGAGCCATNTCGCTATATGCGACGCTTTTAACACACGCGTACAAGAAGCAACACTAGGCCCGGGTAGATTTAGTCTNTTACGAATGGNCACCGGAATGGCCGCATCTAATTTTTAGGGCCAACGAATCTCGGACTCGTTATATCATTGCNCCACACATGGCCANTTGTCACGGAACCACATTGGCTCANGGACAATCANGTGGTTCTCACACGCGCGGTTACAAAACCAAACCAAGGAACTTCGGAAGGCGTAACCAATACCGCCCGCAATTGGAAACAACATGCCCACAAGTTTAAACCCGGTNGGNCAACCTTGGGGAAACCNTTTTCGGNCCGCGTTCTCATCAGGAACACCCCTCNTTTTGGCACAACAAAAGGTGACCCCCCCCTTAAAAAAATTGNCGCGCACAATTTATTCCCCATTCCCTGAGGTGGGTGTACATACTGGANGCATTCAGAACAGTGTCC] consensusID : consensus_9552#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence [GATCGCCGAGGTTCTACAGGCGATGATTACAGCTAAATATTAATCTACTACCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGTCGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTT] [+] EMBL AL930050 [GATCGCCGAGGTTCTACAGGCGATGATTACAGCTAAATATTAATCTACTACCAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGTCCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAATAGCTTATAAGCAAGGATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGTCGACAGGCGCGAACATTCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTGGTTTGTTCCGTAATGTAAACGATCGTGGATGAAATTTTAAGAATCTGTCCTAACGGTAGTAATGTAAAGGTGATTCAATTTGCTACCTTGCCTTCGCACCAATCCCGTTTAAAAAAAGATGAACCCAAGATGCAATGCAATGTGTCATGATTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9552#0 CGAGCAGGACGACCATGACACCGGGGACCTGAGTAAAACTACGAACGCGACCAAGACAGC 60 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 GCAGGAGAACAGTATTAGCCTGCTGCAGCAGCTGGCGGCCAACAAGTGTACGGAAATTGC 120 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 GACCGCCGGCAATCATTCCAGCTAACTGACGCTGGCAACCGCCGGTGGTTTGGCTGCGAT 180 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 TCCGATTGACACGGCCAATGCCGCCACAGCACACCCATCCGTTATCGAATGCGATGACGG 240 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 CGAGGAGGTGGACTAAGCAGGGAAAGCTGTCTGCACCCATACATTTCCAGAATAATGTTT 300 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 TGCCACTCGGCAACGGTCCTTTCTTATTGGCTATTTTTCTACACGATAATGTGGCGATGT 360 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 TTGTAAAGAAAATCTGATTGGAAATATCCAACTGGAAATCTACTACTTGAGGCTGCTATG 420 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 AGCCCACGCTAGACGAAAAGGTGACGTAAGAGGCAAAGTAAGTGATGAGAACTTTTTTTT 480 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 AAATGGCGACAAAAAGAGCTAACAGGCGATGATTACAAGCTAAATATTAAATCTACTAGC 540 consensus_9552#2 ------GATCGCCGAGGTTCTACAGGCGATGATTACA-GCTAAATATTAA-TCTACTA-C 51 consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 CAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGT 600 consensus_9552#2 CAGTAAGTGATTGTCGTTGAAATTTTGCTCCTCAATGGCATACTTTCCAAATGGCGCAGT 111 consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 CCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAAT-AGCTTATA-AGCAAGG 658 consensus_9552#2 CCTGTCAGCGGAATGGAAAGTCGGACGGACGCCCATACTAAAT-AGCTTATA-AGCAAGG 169 consensus_9552#1 -------------------------------CCCTCAGCAGATCGGCCCAGGCAGCNTAG 29 *** * * ** ** * *** * consensus_9552#0 ATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGTCGACAGGCGCGAACAT 718 consensus_9552#2 ATAGATCAAGAATAAGTACGATCAATAACTGATTTGCTGCTTGTCGACAGGCGCGAACAT 229 consensus_9552#1 AGAGATCAAGAACAAGTACGATCAATAACTGATTTGCTGCTTGTTGACAGGCACGAACAT 89 * ********** ******************************* ******* ******* consensus_9552#0 TCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTTTGGTTTG 778 consensus_9552#2 TCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTTTT-GGTTTG 288 consensus_9552#1 TCATGTTGTCATGGTTTTCGCGTCTGCTTCGTGTGCTATAACGTGCTTGTCGG-GTCTTG 148 ************************************************** * *** consensus_9552#0 TTCCGTAATGT-AAACGATCGTGG-ATGAAA----TTTTA-AGAATCTGTCCT-AAC--G 828 consensus_9552#2 TTCCGTAATGT-AAACGATCGTGG-ATGAAA----TTTTA-AGAATCTGTCCT-AAC--G 338 consensus_9552#1 TTCCGTAATGTCAAACGATCGTGGCATGCAACATTTCTTACAGAATCTGTCCTTAACCGG 208 *********** ************ *** ** * *** ************ *** * consensus_9552#0 GTAGT---AATGTAAA--GGTGATTCAA--TTTGCCTACCTT--GCCTTCG--CACCAAT 877 consensus_9552#2 GTAGT---AATGTAAA--GGTGATTCAA--TTTGC-TACCTT--GCCTTCG--CACCAAT 386 consensus_9552#1 GTAGTCACANTGTAACACGGTGATTTCAACTTTGGCTACCTTTGNCCTTCGGGCACCAAT 268 ***** * ***** ******* * **** ****** ****** ******* consensus_9552#0 CCC-GTTTAAAAAAAGATGAACCCAAGATGCAATGCAA--TGTGTCATGATTTCGCAA-G 933 consensus_9552#2 CCC-GTTTAAAAAAAGATGAACCCAAGATGCAATGCAA--TGTGTCATGATTT------- 436 consensus_9552#1 TCCTGTTTCACACAGCATGAACCCAAGATGCAATGCACACTGTGTCCTGATTTCGCAAAG 328 ** **** * * * ********************* ****** ****** consensus_9552#0 TTGTGAGCCATT-CGTTTGCCGCTTTACACCCTACAGAAGAACACTAGCCGGTAGATTAG 992 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 TTGTGAGCCATNTCGCTATATGCGACGCTTTTAACACACGCGTACAAGAAGCAACACTAG 388 consensus_9552#0 TCTTTCGATGCACGATGCGATTATTTGCCACGATTGATGTTTTGCCACATGCATGCAGAC 1052 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 GCCCGGGTAGATTTAGTCTNTTACGAATGGNCACCGGAATGGCCGCATCTAATTTTTAGG 448 consensus_9552#0 ATGCAGACATCGTGTTAGGGTTAAACACAGATTGAGCTACATCGCGATGAACGCAATTAC 1112 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 GCCAACGAATCTCGGACTCGTTATATC---ATTGCNCCACA-CATGGC-----CANTTGT 499 consensus_9552#0 CGTGCACCGAACTTGCGTTTTGAACTTTGCACAGCCCCCTAAATGCGCATTCCTCTGGTT 1172 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 CACGGAACCACATTGGCTCANGGACAATCANGTGGTTCTCACACGCGCGGTTACAAAACC 559 consensus_9552#0 TATTGAGTAACATTCATCGAACCGCATTACTGTCGAATGTGACGGGAGACACAATGC--G 1230 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 AAACCAAGGAACTTCGGAAGGCGTAACCAATACCGCCCGCAATTGGAAACAACATGCCCA 619 consensus_9552#0 TCAGCATAGGGCCATTCTAACCTATCGGTATAACTGCGTGACGCAACATGTAGGC-TCAC 1289 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 CAAGTTTAAACCCGGTNGGNCAACCTTGGGGAAACCNTTTTCGGNCCGCGTTCTCATCAG 679 consensus_9552#0 AATCATCACTGGTTAGGGTGAAAGGGAATAGCGCAGGTCCATTTTATATAACGGATAGAA 1349 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 GAACACCCCTCNTTTTGGCACAACAAAA-GGTGACCCCCCCCTTAAAAAAATTGNCGC-- 736 consensus_9552#0 GCACAGGAGTTGTATGATCACATCAATCCATTACACTATGACAGATGCGTATAGACTGGG 1409 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 GCACAATTTATTCCCCATTCCCTGAGGTGGGTGTAC-ATACTGGANGCATTCAGAACAGT 795 consensus_9552#0 TATTGTTTCAGACAAAAAGTGGCACTATTGAACAGAAGGCATGGTCTGTCCACAATTAAT 1469 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 GTCC-------------------------------------------------------- 799 consensus_9552#0 GGTGTTAAGTTCACGCAACTCTATACCTTAAATAATGTAGCTACATAAAAACTGAAAAAA 1529 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 ATCTTTAGATACTGTAAGTCTACAACAAAAAATATGACTTTTTTTCTAAAGCAAATATTG 1589 consensus_9552#2 ------------------------------------------------------------ consensus_9552#1 ------------------------------------------------------------ consensus_9552#0 AATGCACGGAATATTATTCGTAT 1612 consensus_9552#2 ----------------------- consensus_9552#1 ----------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||