These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1521 fasta sequence [CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG-TGAAAAAT-TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC-C-AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG-CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC-TTCGACGAGTCCGTGCGCATCT-GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC-GG-CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA-C-ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC-TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT-GGCGGTGCGAGGAGAAGCTTC-T-TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGATAGGCTTTT] [+] EMBL BM600312 [CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAAGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACC ] [+] EMBL BM648165 [ ccGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAA ] [+] EMBL CNS08PT1 [ TGGGTT AGCATTTTCAGAGTGCTTGCTGAAAAATATGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGCCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATCTCAAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGTCCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTAATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGTCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTAAAAGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGGCAC GG CAGCGG CAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGG AAGTACATTTTGGCAGC ACGCTCGAC ACACGCTCAA CTGTGGGA TATTCG AGGGC ] [+] EMBL CNS08HVA [ TTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCACTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTG CCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTAATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGTCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATA CCGTCTGCTCGTGACGGCCAGCGATTTTTTGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGAT ] [+] EMBL BX626247 [ AGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGCCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAANGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGNAAGTTCGAGAAGACGA ] [+] EMBL BX624391 [ TTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACACACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGNTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTTCNACGAGTCCGTGCGCATCTGGGGACGTGCGA ] [+] EMBL CNS08QYS [ ACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCACCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTG CCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGATTG ] [+] EMBL CNS08QLV [ AGACGATCTCCGGTCACAAGCACGGCATCAGCGATGTGGCGTGGTCGAGCGATAG CGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCGGGATCTGGGACAC GGCCAGCGG CAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAA ] [-] EMBL CNS09BFG [ AGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCAACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGATACGGTCCTCTGTACGGCTTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATAGAAGCGGAGTTAGT TGCGGTGCGAGGAGAACCTTCTT TCACTATCGTTTAAGGGTAAATTCATAAACCAGAACAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTA ] [-] EMBL CNS08PT2 [ GACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTTTTGCTACGATGGGCTGTGCCGGATCTGGGGCAC GC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC TCTCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGATAGGCTTTT] [-] EMBL CNS08HVB [ CGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GC CAGCGGGAAATGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC T TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGA ] [-] EMBL CNS08QLW [ ACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAAAAAAAACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA CAACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACCGCATT ] [+] EMBL BX602233 [ GAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCAACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTAC ] [-] EMBL CNS08QYT [ TGTTCTGCTGCAACTTCAACCCGCAGATCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATTTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTTTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGAAGCGGAGTTAGTGGGCGGTGCGAGGAGAAGCTTC T TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTG ATGCTAAT ] [-] EMBL CNS08N8X [ GGACCACATGGTGTACATCTGGAACCTGCAGAGAAAAGAGATCGTGCAGACGCTGCAGGGCCACC ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGCGTGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC TCTCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATcacc ] consensusID : consensus_9558#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 855 fasta sequence [GAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG] [+] EMBL CNS09BFF [GAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG] consensusID : consensus_9558#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 705 fasta sequence [ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAG-ATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTTGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATAGCCGCTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT] [+] EMBL AL931291 [ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAG ATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTTGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATAGCCGCTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT] [+] EMBL CNS08N8W [ TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGCCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGT ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9558#0 CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCT 60 consensus_9558#1 -----------------------------------------------------GAGTGCT 7 consensus_9558#2 ----------ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCT 50 ******* consensus_9558#0 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTT 120 consensus_9558#1 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTT 67 consensus_9558#2 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTT 110 ************************************ ********** *********** consensus_9558#0 GCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCG 180 consensus_9558#1 GCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCG 127 consensus_9558#2 GCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCA 170 ******* **** ********************************** *********** consensus_9558#0 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 240 consensus_9558#1 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 187 consensus_9558#2 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 230 ************************************************************ consensus_9558#0 CGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 300 consensus_9558#1 CGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 247 consensus_9558#2 CGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 290 ** ********************************************************* consensus_9558#0 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCAT 360 consensus_9558#1 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTC-------------------- 287 consensus_9558#2 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGATG 350 **************************************** consensus_9558#0 GCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTC 420 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 CACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCA 410 consensus_9558#0 ACCCTTGCCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGG 480 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 CTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGG 470 consensus_9558#0 CTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGAC-GGTAAGTT 539 consensus_9558#1 --------------GGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGAC-GGTAAGTT 332 consensus_9558#2 CTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTT 530 ****************************** ****** ******** consensus_9558#0 CGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGC-GTGGTCGAGCGATA 598 consensus_9558#1 CGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGC-GTGGTCGAGCGATA 391 consensus_9558#2 -GAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATA 589 ******************************************** * ** ********* consensus_9558#0 GCCGTCTGCTCGTGACGGCCAGCGATGACAA-GACGCTGAAAATCTGGGAGCTGAGCTCG 657 consensus_9558#1 GCCGTCTGCTCGTGACGGCCAGCGATGACAA-GACGCTGAAAATCTGGGAGCTGAGCTCG 450 consensus_9558#2 GCCG-CTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCG 648 **** ************************* **************************** consensus_9558#0 GGCAAG-TGTCTGAAAAC-GCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCA 715 consensus_9558#1 GGCAAG-TGTCTGAAAAC-GCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCA 508 consensus_9558#2 GGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT--- 705 ****** ** ******** ************************** *** ******* consensus_9558#0 ACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACG 775 consensus_9558#1 ACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACG 568 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 TGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTC 835 consensus_9558#1 TGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTC 628 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 ACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCT 895 consensus_9558#1 ACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCT 688 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 GGGACACGGC-AGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTAT 954 consensus_9558#1 GGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTAT 748 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 CGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGC 1014 consensus_9558#1 CGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCA-CGCTCGACAACACGC 807 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 TCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACG 1074 consensus_9558#1 TTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG------------ 855 consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 AGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCA 1134 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 GTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGC 1194 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 AGGGCCACACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCT 1254 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 CGCTGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAG 1314 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 ACGATGGATGCGGAGTTAGTGGCGGTGCGAGGAGAAGCTTCTTCACTATCGTTTAAGGGT 1374 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 AAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTA 1434 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 AGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACT 1494 consensus_9558#1 ------------------------------------------------------------ consensus_9558#2 ------------------------------------------------------------ consensus_9558#0 AAACGTGCATGCTAATGATAGGCTTTT 1521 consensus_9558#1 --------------------------- consensus_9558#2 --------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||