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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9558#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1521 fasta sequence
[CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG-TGAAAAAT-TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC-C-AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG-CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC-TTCGACGAGTCCGTGCGCATCT-GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC-GG-CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA-C-ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC-TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT-GGCGGTGCGAGGAGAAGCTTC-T-TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGATAGGCTTTT]
[+] EMBL BM600312 [CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAAGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACC ]
[+] EMBL BM648165 [ ccGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAA ]
[+] EMBL CNS08PT1 [ TGGGTT AGCATTTTCAGAGTGCTTGCTGAAAAATATGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGCCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATCTCAAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGTCCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTAATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGTCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTAAAAGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGGCAC GG CAGCGG CAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGG AAGTACATTTTGGCAGC ACGCTCGAC ACACGCTCAA CTGTGGGA TATTCG AGGGC ]
[+] EMBL CNS08HVA [ TTTCAGAGTGCTTG TGAAAAAT TGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCACTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTG CCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTAATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGTCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATA CCGTCTGCTCGTGACGGCCAGCGATTTTTTGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGAT ]
[+] EMBL BX626247 [ AGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGCCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAANGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGNAAGTTCGAGAAGACGA ]
[+] EMBL BX624391 [ TTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACACACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACCCTTG CCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGNTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTTCNACGAGTCCGTGCGCATCTGGGGACGTGCGA ]
[+] EMBL CNS08QYS [ ACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCACCACCGTCACAAAGTCAGCATGCACCATC C AGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTG CCGGACATACCAAGGCGGTGTCAGCGGTAAAGTTCAGTCCGAACGGGGAATGGATTG ]
[+] EMBL CNS08QLV [ AGACGATCTCCGGTCACAAGCACGGCATCAGCGATGTGGCGTGGTCGAGCGATAG CGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCGGGATCTGGGACAC GGCCAGCGG CAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAA ]
[-] EMBL CNS09BFG [ AGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCAACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGATACGGTCCTCTGTACGGCTTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATAGAAGCGGAGTTAGT TGCGGTGCGAGGAGAACCTTCTT TCACTATCGTTTAAGGGTAAATTCATAAACCAGAACAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTA ]
[-] EMBL CNS08PT2 [ GACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTTTTGCTACGATGGGCTGTGCCGGATCTGGGGCAC GC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC TCTCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGATAGGCTTTT]
[-] EMBL CNS08HVB [ CGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GC CAGCGGGAAATGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC T TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATGA ]
[-] EMBL CNS08QLW [ ACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAAAAAAAACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA CAACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACCGCATT ]
[+] EMBL BX602233 [ GAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGC CAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCAACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCAGTGAGGACCACATGGTGTAC ]
[-] EMBL CNS08QYT [ TGTTCTGCTGCAACTTCAACCCGCAGATCAATCTGATCGTGTCGGGCAGC TTCGACGAGTCCGTGCGCATCT GGGACGTGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACAC GGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGCTCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACGAGAAGTACTGCATTTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTTTCGGGCAGTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGCAGGGCCA C ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGC TGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGAAGCGGAGTTAGTGGGCGGTGCGAGGAGAAGCTTC T TCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTG ATGCTAAT ]
[-] EMBL CNS08N8X [ GGACCACATGGTGTACATCTGGAACCTGCAGAGAAAAGAGATCGTGCAGACGCTGCAGGGCCACC ACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCTCGCGTGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAGACGATGGATGCGGAGTTAGT GGCGGTGCGAGGAGAAGCTTC TCTCACTATCGTTTAAGGGTAAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTAAGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACTAAACGTGCATGCTAATcacc ]
consensusID : consensus_9558#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 855 fasta sequence
[GAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG]
[+] EMBL CNS09BFF [GAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTTGCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCGTAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGACGGTAAGTTCGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCGTGGTCGAGCGATAGCCGTCTGCTCGTGACGGCCAGCGATGACAAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGTGTCTGAAAACGCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCAACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACGTGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTCACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCTGGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTATCGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCACGCTCGACAACACGCTTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG]
consensusID : consensus_9558#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 705 fasta sequence
[ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAG-ATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTTGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATAGCCGCTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT]
[+] EMBL AL931291 [ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCTTGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAG ATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCACTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGGCTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTTGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATAGCCGCTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCGGGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT]
[+] EMBL CNS08N8W [ TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTTGCACGTAAAACTGCTGTCGCCATCTTCATATTAACGGCAGTTTGCTTATGTTCTAAACCATAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTACGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGCCCTGTAGGACACGGTGGACATCCGATTCACATACCGACTCCGATACAAACTGCTCCTCCACCGTCACAAAGTCAGCATGCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9558#0 CCGAGAAAAGACGCGAACTCGGTGAGATTAATTGTTTGGGTTCAGCATTTTCAGAGTGCT 60
consensus_9558#1 -----------------------------------------------------GAGTGCT 7
consensus_9558#2 ----------ATCGCCGAGGTTGCACGAGGATTGTTTGGGTTTAGCATTTTCAGAGTGCT 50
*******
consensus_9558#0 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTT 120
consensus_9558#1 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTTTAAAACTGGATAAGAAGTATCTT 67
consensus_9558#2 TGTGAAAAATTGGTCTCAAATCTTGAAAATAAAACTATAAAACTGGAATAGAAGTATCTT 110
************************************ ********** ***********
consensus_9558#0 GCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCG 180
consensus_9558#1 GCACGTATAACTCCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTGTGTTCTAAACCG 127
consensus_9558#2 GCACGTAAAACTGCTGTCGCCATCTTCAGATTAACGGCAGTTTGCTTATGTTCTAAACCA 170
******* **** ********************************** ***********
consensus_9558#0 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 240
consensus_9558#1 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 187
consensus_9558#2 TAAAACACCAAAAAGGACGAACCGCATTTTAGCTCGCTGTGCAACCTTGGCTTGTGTTTA 230
************************************************************
consensus_9558#0 CGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 300
consensus_9558#1 CGCTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 247
consensus_9558#2 CGGTAAAGACATACTGCCGAAGCGATGGTACCAATCGGGGGTCCTGTAGGACACGGTGGA 290
** *********************************************************
consensus_9558#0 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGCAT 360
consensus_9558#1 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTC-------------------- 287
consensus_9558#2 CATCCGATTCACATACCGACTCCAATACAAACTGCTCCTCCACCGTCACAAAGTCAGATG 350
****************************************
consensus_9558#0 GCACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTC 420
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 CACCATCCAGTCAGAACCGGCAATCACTATCGGTGAAACCAAACTACACCCTCAAGTTCA 410
consensus_9558#0 ACCCTTGCCGGACATACCAAGGCGGTGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGG 480
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 CTCTTGCCGGACATACCAAGGCGGTAGTCGGCGGTAAAGTTCAGTCCGAACGGTGAATGG 470
consensus_9558#0 CTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGAC-GGTAAGTT 539
consensus_9558#1 --------------GGCCGACAAGTTGATCAAAATCTGGGGCGCCTACGAC-GGTAAGTT 332
consensus_9558#2 CTTGCAAGCTCCTCGGCCGACAAGTTGATCAAAATCTGGGGCGCTTACGACTGGTAAGTT 530
****************************** ****** ********
consensus_9558#0 CGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGC-GTGGTCGAGCGATA 598
consensus_9558#1 CGAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGC-GTGGTCGAGCGATA 391
consensus_9558#2 -GAGAAGACGATCTCCGGCCACAAGCTCGGCATCAGCGATGTGGCCGAGGNCGAGCGATA 589
******************************************** * ** *********
consensus_9558#0 GCCGTCTGCTCGTGACGGCCAGCGATGACAA-GACGCTGAAAATCTGGGAGCTGAGCTCG 657
consensus_9558#1 GCCGTCTGCTCGTGACGGCCAGCGATGACAA-GACGCTGAAAATCTGGGAGCTGAGCTCG 450
consensus_9558#2 GCCG-CTGCTCGTGACGGCCAGCGATGACANAGACGCTGAAAATCTGGGAGCTGAGCTCG 648
**** ************************* ****************************
consensus_9558#0 GGCAAG-TGTCTGAAAAC-GCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCA 715
consensus_9558#1 GGCAAG-TGTCTGAAAAC-GCTGAAGGGCCACACCAACTACGTGTTCTGCTGCAACTTCA 508
consensus_9558#2 GGCAAGGTGNCTGAAAACCGCTGAAGGGCCACACCAACTACGTGTNCTGNTGCAACT--- 705
****** ** ******** ************************** *** *******
consensus_9558#0 ACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACG 775
consensus_9558#1 ACCCGCAGAGCAATCTGATCGTGTCGGGCAGCTTCGACGAGTCCGTGCGCATCTGGGACG 568
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 TGCGAACGGGCAAGTGTTTGAAGACACTGCCCGCACACTCCGACCCCGTGTCGGCGGTTC 835
consensus_9558#1 TGCGAACGGGCAAGTGTTTGAAGACGCTGCCCGCACACTCCGACCCCGTGTCGGCGGTTC 628
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 ACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCT 895
consensus_9558#1 ACTTCAACCGGGACGGGTCGTTGATCGTATCGTCCAGCTACGATGGGCTGTGCCGGATCT 688
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 GGGACACGGC-AGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTAT 954
consensus_9558#1 GGGACACTGCCAGCGGCCAGTGTCTGAAGACGCTGATCGACGATGACAATCCGCCGGTAT 748
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 CGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCAGCAACGCTCGACAACACGC 1014
consensus_9558#1 CGTTCGTGAAGTTCTCGCCGAACGGCAAGTACATTTTGGCGGCA-CGCTCGACAACACGC 807
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 TCAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCGGCCATCGGAACG 1074
consensus_9558#1 TTAAGCTGTGGGACTATTCGAAGGGCAAGTGCCTGAAGACGTACACCG------------ 855
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 AGAAGTACTGCATCTTTGCCAACTTCTCCGTCACCGGTGGCAAGTGGATCGTGTCGGGCA 1134
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 GTGAGGACCACATGGTGTACATCTGGAACCTGCAGAGCAAAGAGATCGTGCAGACGCTGC 1194
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 AGGGCCACACGGACACGGTCCTCTGTACGGCCTGCCATCCGACGGAGAACATCATTGCCT 1254
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 CGCTGCGCTCGAGAACGATAAAACGATAAAGCTTTGGAAGAGCGATACGTAGAGTGGGAG 1314
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 ACGATGGATGCGGAGTTAGTGGCGGTGCGAGGAGAAGCTTCTTCACTATCGTTTAAGGGT 1374
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 AAATTCATAAACCAGAGCAGTAAGTAGACGGTAGGCGATGCGGACAGTTGTAGCGAGGTA 1434
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 AGAAAGATTCAGGATGGTTTTATAAGACTTCGACATCTTGTGTATAATAATATACAAACT 1494
consensus_9558#1 ------------------------------------------------------------
consensus_9558#2 ------------------------------------------------------------
consensus_9558#0 AAACGTGCATGCTAATGATAGGCTTTT 1521
consensus_9558#1 ---------------------------
consensus_9558#2 ---------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||